TCONS_00042922 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042922
Unique NameTCONS_00042922
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length343

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042922 ID=TCONS_00042922|Name=TCONS_00042922|organism=Clytia hemisphaerica|type=transcript|length=343bp
tttgcacggctgacgattatgGTGGTAATGACTCATCTATGTCTTGTGCT
TTTTCTTTCAACTAGTTTTCTCTTTCAGAGCTTTCATATATCATCTGGTT
TTCTCCATATAATAGATATCATGAGTTTGTTGTACAAGCTACCCTTTCGC
ATCTTTACTTCACAATCCAAACACAAAAAACAATGCCCCATTGTTTTTGA
TTTCATCTCAACTACCTACTGTCGGGTACCTATTAGCCTGGGGGCcgcta
atacacctttcccgaagtgttatttaggctttttgactttttttgtttta
atgtttggatgtttctatttagtttcataaaattgtatgtcgc
Run BLAST on NCBI

transcript from alignment at sc0003783:5535..5877

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042922 ID=TCONS_00042922|Name=TCONS_00042922|organism=Clytia hemisphaerica|type=transcript|length=343bp|location=Sequence derived from alignment at sc0003783:5535..5877 (Clytia hemisphaerica)
gcgacatacaattttatgaaactaaatagaaacatccaaacattaaaaca
aaaaaagtcaaaaagcctaaataacacttcgggaaaggtgtattagcgGC
CCCCAGGCTAATAGGTACCCGACAGTAGGTAGTTGAGATGAAATCAAAAA
CAATGGGGCATTGTTTTTTGTGTTTGGATTGTGAAGTAAAGATGCGAAAG
GGTAGCTTGTACAACAAACTCATGATATCTATTATATGGAGAAAACCAGA
TGATATATGAAAGCTCTGAAAGAGAAAACTAGTTGAAAGAAAAAGCACAA
GACATAGATGAGTCATTACCACcataatcgtcagccgtgcaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026689XLOC_026689Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042922-exon-sc0003783-1491911889:5535..5877TCONS_00042922-exon-sc0003783-1491911889:5535..5877Clytia hemisphaericaexon
TCONS_00042922-exon-sc0003783-1510915933:5535..5877TCONS_00042922-exon-sc0003783-1510915933:5535..5877Clytia hemisphaericaexon
TCONS_00042922-exon-sc0003783-1575043694:5535..5877TCONS_00042922-exon-sc0003783-1575043694:5535..5877Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003783supercontigsc0003783:5535..5877 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.32379	1.03272	1.19909	1.4664	1.07112	0	1.02116	0.956002	0.223107	1.10541	0.536471	0.528982	0.352165	0	0.90203	2.58138	0.596259	1.01858	0	0.294511	0.511966	1.87289	1.21427	0.275986	0	1.77586	2.54125	1.16233	1.76317	0.898193
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042922 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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