TCONS_00042916 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042916
Unique NameTCONS_00042916
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length155

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042916 ID=TCONS_00042916|Name=TCONS_00042916|organism=Clytia hemisphaerica|type=transcript|length=155bp
acctACAAACTAACACTAAAAAAATTGCATTTAAagtattaaaatttttt
catagtgtagtgtaaaaatatcaaatcaTAGAATTCTTTGGTTTTGGCTC
TTGATACTTCTTATACCATGGAGGGTATACCATTACGCGCAGCTTTTAAC
GGGTA
Run BLAST on NCBI

transcript from alignment at sc0003771:12180..12334

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042916 ID=TCONS_00042916|Name=TCONS_00042916|organism=Clytia hemisphaerica|type=transcript|length=155bp|location=Sequence derived from alignment at sc0003771:12180..12334 (Clytia hemisphaerica)
TACCCGTTAAAAGCTGCGCGTAATGGTATACCCTCCATGGTATAAGAAGT
ATCAAGAGCCAAAACCAAAGAATTCTAtgatttgatatttttacactaca
ctatgaaaaaattttaatactTTAAATGCAATTTTTTTAGTGTTAGTTTG
Taggt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026683XLOC_026683Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042916-exon-sc0003771-1491911889:12180..12334TCONS_00042916-exon-sc0003771-1491911889:12180..12334Clytia hemisphaericaexon
TCONS_00042916-exon-sc0003771-1510915933:12180..12334TCONS_00042916-exon-sc0003771-1510915933:12180..12334Clytia hemisphaericaexon
TCONS_00042916-exon-sc0003771-1575043694:12180..12334TCONS_00042916-exon-sc0003771-1575043694:12180..12334Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003771supercontigsc0003771:12180..12334 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042916 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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