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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042869 ID=TCONS_00042869|Name=TCONS_00042869|organism=Clytia hemisphaerica|type=transcript|length=1159bp
tttcatttataaaaaaaatatttttctgagtttttcaataaaaaattact
tggcACTTATGGGCCACCATACACTAGGCCAAGCCGACTGCCGAAAAATC
GTTATTTGGGGTTACTTTATACGAAGGGAAGGTGTCTTAGTACTATACCT
ATATAAATAAGTCTGACTGACaagttaggctaactgttatgatcACCATT
ACTCCGGAAGAAGCCAACACACGTGTGCATCGCCGGGTGGGTGCACCGCC
GGCCGGGTGAGGGGTTAGGGATGTGCAAATCCCCTAACCCTATGCTACGC
GCTACGCGCGCGCTATGCGCGTGCATCTGAAGCATTAGCCGAATCTAATA
TCTGTGTAGAGCTATCCTCTTTCTTCCTCTTTTTTTTGCACAAGCAAACT
AAACAAGTCAAGCAAGTATAGGCtaaaatttacaagaaaataAGCATCAT
TAAATCCTAAACATCATCATTGTGCAGAGTATGGCAGAAATCATTGAGAT
CTCGGGGGCAGAGATTGCTTGCTTTTCAAGAGCAGgagcaaaattttgat
aaatctacATTTCAGGGgcaaaatttcatcaatttttctggatttttaaT
GGTGGGAAATTTTCCTTGGAGGCAACCATatgacatgctctgaaaacCTG
GGTTACtctataccgtgagatcgggtggTCGGGTGGAGGCAAATTCCGCC
GACAGCGGCCAATAATTAGAAAGATATTTCATACATGCTTGAGTGAAACG
CggaaaatgcaaagttccgCAGGATATCCGCAAACTCCGCCGGCGGCGGC
GGATAATTAGAAAGATATTCCATACATGCTTGAGTGAAACGAGGGTTTTG
CGATAATTCGGAAAATCTATCAAAATCTATGCCCGAGTAGTGGTGAAAAT
ATGAAGGCACTTAAAGGCGCATAGGGCATGATTTTCTTTCCCCTGTGCAT
TATGATTTCCATGTGTGTGTaccaaaataaaatgtttgCTCTCAAACCAG
AATGAAAGAGGAAACATTTGAGACAGAATAGAAGGAAATTTCTAGGTTGA
AAGATGTATCTACTAATCATATCATACTTGTATGATAGGTAGATATATCT
TTTAACAGAACAGAAGGTTTTCCcctgaaaatcaaaattgagAGGACACA
AAAGATCAG Run BLAST on NCBI transcript from alignment at sc0003749:2548..3706 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042869 ID=TCONS_00042869|Name=TCONS_00042869|organism=Clytia hemisphaerica|type=transcript|length=1159bp|location=Sequence derived from alignment at sc0003749:2548..3706 (Clytia hemisphaerica)
CTGATCTTTTGTGTCCTctcaattttgattttcaggGGAAAACCTTCTGT
TCTGTTAAAAGATATATCTACCTATCATACAAGTATGATATGATTAGTAG
ATACATCTTTCAACCTAGAAATTTCCTTCTATTCTGTCTCAAATGTTTCC
TCTTTCATTCTGGTTTGAGAGcaaacattttattttggtACACACACATG
GAAATCATAATGCACAGGGGAAAGAAAATCATGCCCTATGCGCCTTTAAG
TGCCTTCATATTTTCACCACTACTCGGGCATAGATTTTGATAGATTTTCC
GAATTATCGCAAAACCCTCGTTTCACTCAAGCATGTATGGAATATCTTTC
TAATTATCCGCCGCCGCCGGCGGAGTTTGCGGATATCCTGcggaactttg
cattttccGCGTTTCACTCAAGCATGTATGAAATATCTTTCTAATTATTG
GCCGCTGTCGGCGGAATTTGCCTCCACCCGAccacccgatctcacggtat
agaGTAACCCAGgttttcagagcatgtcatATGGTTGCCTCCAAGGAAAA
TTTCCCACCAttaaaaatccagaaaaattgatgaaattttgcCCCTGAAA
TgtagatttatcaaaattttgctcCTGCTCTTGAAAAGCAAGCAATCTCT
GCCCCCGAGATCTCAATGATTTCTGCCATACTCTGCACAATGATGATGTT
TAGGATTTAATGATGCTtattttcttgtaaattttaGCCTATACTTGCTT
GACTTGTTTAGTTTGCTTGTGCAAAAAAAAGAGGAAGAAAGAGGATAGCT
CTACACAGATATTAGATTCGGCTAATGCTTCAGATGCACGCGCATAGCGC
GCGCGTAGCGCGTAGCATAGGGTTAGGGGATTTGCACATCCCTAACCCCT
CACCCGGCCGGCGGTGCACCCACCCGGCGATGCACACGTGTGTTGGCTTC
TTCCGGAGTAATGGTgatcataacagttagcctaacttGTCAGTCAGACT
TATTTATATAGGTATAGTACTAAGACACCTTCCCTTCGTATAAAGTAACC
CCAAATAACGATTTTTCGGCAGTCGGCTTGGCCTAGTGTATGGTGGCCCA
TAAGTgccaagtaattttttattgaaaaactcagaaaaatatttttttta
taaatgaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042869-exon-sc0003749-1491911889:2548..3706 | TCONS_00042869-exon-sc0003749-1491911889:2548..3706 | Clytia hemisphaerica | exon |
| TCONS_00042869-exon-sc0003749-1510915933:2548..3706 | TCONS_00042869-exon-sc0003749-1510915933:2548..3706 | Clytia hemisphaerica | exon |
| TCONS_00042869-exon-sc0003749-1575043694:2548..3706 | TCONS_00042869-exon-sc0003749-1575043694:2548..3706 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003749 | supercontig | sc0003749:2548..3706 . |
Blast
The following BLAST results are available for this feature:
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