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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042847 ID=TCONS_00042847|Name=TCONS_00042847|organism=Clytia hemisphaerica|type=transcript|length=1351bp
NTTAAAACAAccattcaaaaaatgaatttacggGCGTTAGAGCGAATAAA
GCGGATAGCGTAGATGAACCAGATGGTATTTACACCAGGTTTCGAGAATC
AATTATATATTGGAGACATTATTTTCGATTTTgcaataagtttttgaaaa
attaaaacaaccattcaaaaattgaatttacgGGCATTAGAACAAGTAAA
GCGGATAGCGTAGATGAACCAGATGGTATTTACACCAGGTTTCGAGAATC
AATTATATTTCGGAGACATTATTTTCGATTTTGCAANACAAccattcaaa
aaatgaatttacggGCGTTAGAGCGAATAAAGCGGATAGCGTAGATGAAC
CAGATGGTATTTACACCAGGTTTCGAGAATCAATTATATTTCGGAGACAT
TATTTTCGATTTTgcaataagtttttgaaaaattaaaacaaccattcaaa
aattgaatttacgGGCGTTAGAACAAGTAAAGCGGCATTAGAATTCATGA
TTATTGAAGTCAGCGGAGGAAAGACGGCGTTTAATAGTTTCGTGTCAGAC
ATTTTTAAATAGATCGGTTCCTTTTCGAATTATTCAAGTACATTATAAAT
TTTGAATAGTTTCAAAAATGAATAAATAAACAATTGTCCATTGGCTTCAT
GTCGATTTTAGGATGATGTTAAGATTTTCAACGGCCTAACGAGGGACTAA
GGCATTAAGGCGAACATGCTTGCAAAACAATCGTTAATTTCCCATTTTGA
GTCAGAGTATTGCGTctcttctatttcttctttttcatgctCAAAACGAA
CTGGTGACGTGACGTTAGAACAGGTGGAGGAGATATTAATGAGTTGACAA
AATTATTGATCGGTCAGTGGACCGGATCGTATTATGTTTACCAGTCGATT
GATTGGTAGAGGCATTTTCCAGCCTGTGGGTGTCAGAAGAGGCATTAGAA
TTTAATGATTATTGATGAATTCGTTTGAACTTCGACGGACAACAGGTATG
AGAGACTTACTTATTTAACTTCGTCCCCTAATTCCCAAATCACTTATCAA
TTTGCGCTTTTATCGGTTAACCAAGGTTGAAGAAAAGGAAAGAAGAGATg
atattattaaaaaaaggcAGAAAAATGCAAAACAGCTACGAGGAGAGAAA
GCAATATTTAATATCTCTAGTGGGGAATTAAAAGCAGCCAACAACGATTC
AGATTGAGCTCAGGTCGATGGGAGTAATAAGTTAGGTAGACACGGAGCAT
accatataaaaaaaaatatcattggAATTAAGCCTTACATAGCCATTACA
AATCAATATATCACCTTTGAAAATGAGTTACCAATCCCTTTAAGAATTGA
C Run BLAST on NCBI transcript from alignment at sc0003734:2..1352- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042847 ID=TCONS_00042847|Name=TCONS_00042847|organism=Clytia hemisphaerica|type=transcript|length=1351bp|location=Sequence derived from alignment at sc0003734:2..1352- (Clytia hemisphaerica)
NTTAAAACAACCATTCAAAAAATGAATTTACGGGCGTTAGAGCGAATAAA
GCGGATAGCGTAGATGAACCAGATGGTATTTACACCAGGTTTCGAGAATC
AATTATATATTGGAGACATTATTTTCGATTTTGCAATAAGTTTTTGAAAA
ATTAAAACAACCATTCAAAAATTGAATTTACGGGCATTAGAACAAGTAAA
GCGGATAGCGTAGATGAACCAGATGGTATTTACACCAGGTTTCGAGAATC
AATTATATTTCGGAGACATTATTTTCGATTTTGCAANACAACCATTCAAA
AAATGAATTTACGGGCGTTAGAGCGAATAAAGCGGATAGCGTAGATGAAC
CAGATGGTATTTACACCAGGTTTCGAGAATCAATTATATTTCGGAGACAT
TATTTTCGATTTTGCAATAAGTTTTTGAAAAATTAAAACAACCATTCAAA
AATTGAATTTACGGGCGTTAGAACAAGTAAAGCGGCATTAGAATTCATGA
TTATTGAAGTCAGCGGAGGAAAGACGGCGTTTAATAGTTTCGTGTCAGAC
ATTTTTAAATAGATCGGTTCCTTTTCGAATTATTCAAGTACATTATAAAT
TTTGAATAGTTTCAAAAATGAATAAATAAACAATTGTCCATTGGCTTCAT
GTCGATTTTAGGATGATGTTAAGATTTTCAACGGCCTAACGAGGGACTAA
GGCATTAAGGCGAACATGCTTGCAAAACAATCGTTAATTTCCCATTTTGA
GTCAGAGTATTGCGTCTCTTCTATTTCTTCTTTTTCATGCTCAAAACGAA
CTGGTGACGTGACGTTAGAACAGGTGGAGGAGATATTAATGAGTTGACAA
AATTATTGATCGGTCAGTGGACCGGATCGTATTATGTTTACCAGTCGATT
GATTGGTAGAGGCATTTTCCAGCCTGTGGGTGTCAGAAGAGGCATTAGAA
TTTAATGATTATTGATGAATTCGTTTGAACTTCGACGGACAACAGGTATG
AGAGACTTACTTATTTAACTTCGTCCCCTAATTCCCAAATCACTTATCAA
TTTGCGCTTTTATCGGTTAACCAAGGTTGAAGAAAAGGAAAGAAGAGATG
ATATTATTAAAAAAAGGCAGAAAAATGCAAAACAGCTACGAGGAGAGAAA
GCAATATTTAATATCTCTAGTGGGGAATTAAAAGCAGCCAACAACGATTC
AGATTGAGCTCAGGTCGATGGGAGTAATAAGTTAGGTAGACACGGAGCAT
ACCATATAAAAAAAAATATCATTGGAATTAAGCCTTACATAGCCATTACA
AATCAATATATCACCTTTGAAAATGAGTTACCAATCCCTTTAAGAATTGA
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042847-exon-sc0003734-1575043694:2..1352 | TCONS_00042847-exon-sc0003734-1575043694:2..1352 | Clytia hemisphaerica | exon |
| TCONS_00042847-exon-sc0003734-1510915933:2..1352 | TCONS_00042847-exon-sc0003734-1510915933:2..1352 | Clytia hemisphaerica | exon |
| TCONS_00042847-exon-sc0003734-1491911889:2..1352 | TCONS_00042847-exon-sc0003734-1491911889:2..1352 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003734 | supercontig | sc0003734:2..1352 - |
Blast
The following BLAST results are available for this feature:
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