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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042831 ID=TCONS_00042831|Name=TCONS_00042831|organism=Clytia hemisphaerica|type=transcript|length=1127bp
GGGAGCCAGAAACaccatatgacttaagtttgaaaattaaaccatcgtgc
caaactctgtcaaaagctttggaaatatcAAGGAACACTCCACGAGTATC
TAGAAGTGGATCAACATCAAAACCATTCAGGGTGTCGTGTGTTATGGATA
ACAGCTGAGACACACAAGAGTCACCCTTGCGGAAACCAGACTGGGAATTT
GTGAAAAGATTGTTGTTTTCGAAATAGGTGTAGACGGAGTCAAAGATagt
atttttcaaagatttttccaaaaataggcagaagagacactggtctataa
ttttttaccacactcttgTCCCCTTTGTTTTTGTACACAGGAACAACATT
TGCTCTTTTCCAGTTTGatggaaaaatgcaaaaatccAAAGAATATTGGT
AGATCTTCATAAGAGGTTTATCCAAGGATTCATCACAAATTTTAATCATC
TGTATGGAGATGTCATCCCAACCATGCGCTTTGTTAGTCGTAAGTGCGCG
AATGAGGGCTAAGATTTTGGCTTCATCAAGAGCGATATTGTTTATTCTAA
GATTAGttacatatttttgttgcggtAAAACACTATCAGTGTCTATGAGA
TAGCACTGATTAGCAAAGAACTGATTAAATATATTTGTTTTTGTAGCGAC
GTCAGCAATAAGATTATTGCAGGAATCTCGAACAGGTGGAATCCTTGGCG
ACTTCCTCCtatgaagaaattgatttagaatagaccagtatttcttTGAA
CTTAAGTTTGGGTCATTAAGGTTATTTGCTAAGCGAGAAAAATAAGAATC
TTTAGCATCCCTGACAGCCCTTCTACACCTAGATTGATGTTCTTGAAGGT
TTTTGAGGTCTTCTTTCCTCCTCCCATTTTTTACATACCACTCATAAACT
TTCAATTTTACAAGTAGGGCTCTCTTTATCTCAGCCGTCATCCATACCGC
ATCCTTATTCCTGATGGTAATGACTTTATTAGGCACAAAGTTTGACATAA
TATTAATGATGGTTTCAGTATCCAGAATCAAATGATATGCTGATGAAAAA
ATTAGATCAATGCAAGAAGTTGAATTATCAAGGAGATGAGTAGGCCCATC
AATTAATTGTTTCAGACCATGCTGGGT Run BLAST on NCBI transcript from alignment at sc0003711:5588..6714 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042831 ID=TCONS_00042831|Name=TCONS_00042831|organism=Clytia hemisphaerica|type=transcript|length=1127bp|location=Sequence derived from alignment at sc0003711:5588..6714 (Clytia hemisphaerica)
ACCCAGCATGGTCTGAAACAATTAATTGATGGGCCTACTCATCTCCTTGA
TAATTCAACTTCTTGCATTGATCTAATTTTTTCATCAGCATATCATTTGA
TTCTGGATACTGAAACCATCATTAATATTATGTCAAACTTTGTGCCTAAT
AAAGTCATTACCATCAGGAATAAGGATGCGGTATGGATGACGGCTGAGAT
AAAGAGAGCCCTACTTGTAAAATTGAAAGTTTATGAGTGGTATGTAAAAA
ATGGGAGGAGGAAAGAAGACCTCAAAAACCTTCAAGAACATCAATCTAGG
TGTAGAAGGGCTGTCAGGGATGCTAAAGATTCTTATTTTTCTCGCTTAGC
AAATAACCTTAATGACCCAAACTTAAGTTCAaagaaatactggtctattc
taaatcaatttcttcataGGAGGAAGTCGCCAAGGATTCCACCTGTTCGA
GATTCCTGCAATAATCTTATTGCTGACGTCGCTACAAAAACAAATATATT
TAATCAGTTCTTTGCTAATCAGTGCTATCTCATAGACACTGATAGTGTTT
TaccgcaacaaaaatatgtaaCTAATCTTAGAATAAACAATATCGCTCTT
GATGAAGCCAAAATCTTAGCCCTCATTCGCGCACTTACGACTAACAAAGC
GCATGGTTGGGATGACATCTCCATACAGATGATTAAAATTTGTGATGAAT
CCTTGGATAAACCTCTTATGAAGATCTACCAATATTCTTTggatttttgc
atttttccatCAAACTGGAAAAGAGCAAATGTTGTTCCTGTGTACAAAAA
CAAAGGGGAcaagagtgtggtaaaaaattatagaccagtgtctcttctgc
ctatttttggaaaaatctttgaaaaatactATCTTTGACTCCGTCTACAC
CTATTTCGAAAACAACAATCTTTTCACAAATTCCCAGTCTGGTTTCCGCA
AGGGTGACTCTTGTGTGTCTCAGCTGTTATCCATAACACACGACACCCTG
AATGGTTTTGATGTTGATCCACTTCTAGATACTCGTGGAGTGTTCCTTga
tatttccaaagcttttgacagagtttggcacgatggtttaattttcaaac
ttaagtcatatggtGTTTCTGGCTCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042831-exon-sc0003711-1491911889:5588..6714 | TCONS_00042831-exon-sc0003711-1491911889:5588..6714 | Clytia hemisphaerica | exon |
| TCONS_00042831-exon-sc0003711-1510915933:5588..6714 | TCONS_00042831-exon-sc0003711-1510915933:5588..6714 | Clytia hemisphaerica | exon |
| TCONS_00042831-exon-sc0003711-1575043694:5588..6714 | TCONS_00042831-exon-sc0003711-1575043694:5588..6714 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003711 | supercontig | sc0003711:5588..6714 . |
Blast
The following BLAST results are available for this feature:
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