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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042808 ID=TCONS_00042808|Name=TCONS_00042808|organism=Clytia hemisphaerica|type=transcript|length=1022bp
TGTAAGAGGCCAAAATGGAAGCAGAACCAAACTTGAAGCAGCTAATCGCC
TCGATGAATTCTATTGTATTTAACAATAGAAGTTATTTACACGCACTTGA
AGTGAGAAATTATTATGAAAGATCAAATAACGATTCAGGGGGTAATCata
tatttcttaaaaatcagaAATGAGACTAatatactttttataagaactta
caGTGAGCGTAAGTTTTGTGGATTGAAGAGAGAAGTTTAAGTCTTTTAAG
CAATGTAAAGGCGTTATGTAATTAAAGATTCGGATTTAGGTTCTGCTTCC
AGTTTGGTTTAGGTTTTGAATATCACGGAACCAAGATGGAAGCACTTGTG
AAAACATTAAGAGAATCNCTTTTAAGCAATGTAAAGGCGTTATGTAATTA
AAGATTCGGATTTAGGTTCTGCTTCCAGTTTGGTTTAGGTTTTGAATATC
ACGGAACCAAGATGGAAGCACTTGTGAAAacattaagaaaattaaaacaa
ttaaaattattttcgttttgatttaatttgaaGTGTTTTGGATGTCAATA
TCCCTCAGTATCTCCCTAACACATCTCATAGTATTCTAATTTAGAATCTG
CTTCCATTTTGGTTCATGTGTTGAATATAGCAGAACCAAAATGGAAGCAC
TTGTAAAATCATAAGAATTCTATGTTATGTACTCATTTACATATTTTCAT
TTCGAAGTGTTTTGGGAGTCTAACGGTCTAATTCTTCTTTAGAAAGGTAT
TCCGAATCGCGATTTAGATCTGCTTCAATTTTGGTTCTGCTATATTCAAC
ACCCGAACCAAAATGGAAGCACATTCTAGATAAGAATCTGGGAACTGTTT
TAGGGAGATATTGAGATCCAAAGACTTTGAAATAAAAATAAAGGAGTtaa
taaaacataaaaccaGTTTTCCTTATGTTTTTACGACTGCTTCCATTTTG
GTTCTGCTATATTCAACACCCGAACCAAAATGAAAGCACATTCCAGATAA
GAATCTGGGAACTGTTTTAGGG Run BLAST on NCBI transcript from alignment at sc0003694:3006..4027 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042808 ID=TCONS_00042808|Name=TCONS_00042808|organism=Clytia hemisphaerica|type=transcript|length=1022bp|location=Sequence derived from alignment at sc0003694:3006..4027 (Clytia hemisphaerica)
CCCTAAAACAGTTCCCAGATTCTTATCTGGAATGTGCTTTCATTTTGGTT
CGGGTGTTGAATATAGCAGAACCAAAATGGAAGCAGTCGTAAAAACATAA
GGAAAACtggttttatgttttattaACTCCTTTATTTTTATTTCAAAGTC
TTTGGATCTCAATATCTCCCTAAAACAGTTCCCAGATTCTTATCTAGAAT
GTGCTTCCATTTTGGTTCGGGTGTTGAATATAGCAGAACCAAAATTGAAG
CAGATCTAAATCGCGATTCGGAATACCTTTCTAAAGAAGAATTAGACCGT
TAGACTCCCAAAACACTTCGAAATGAAAATATGTAAATGAGTACATAACA
TAGAATTCTTATGATTTTACAAGTGCTTCCATTTTGGTTCTGCTATATTC
AACACATGAACCAAAATGGAAGCAGATTCTAAATTAGAATACTATGAGAT
GTGTTAGGGAGATACTGAGGGATATTGACATCCAAAACACttcaaattaa
atcaaaacgaaaataattttaattgttttaattttcttaatgtTTTCACA
AGTGCTTCCATCTTGGTTCCGTGATATTCAAAACCTAAACCAAACTGGAA
GCAGAACCTAAATCCGAATCTTTAATTACATAACGCCTTTACATTGCTTA
AAAGNGATTCTCTTAATGTTTTCACAAGTGCTTCCATCTTGGTTCCGTGA
TATTCAAAACCTAAACCAAACTGGAAGCAGAACCTAAATCCGAATCTTTA
ATTACATAACGCCTTTACATTGCTTAAAAGACTTAAACTTCTCTCTTCAA
TCCACAAAACTTACGCTCACtgtaagttcttataaaaagtatatTAGTCT
CATTtctgatttttaagaaatatatGATTACCCCCTGAATCGTTATTTGA
TCTTTCATAATAATTTCTCACTTCAAGTGCGTGTAAATAACTTCTATTGT
TAAATACAATAGAATTCATCGAGGCGATTAGCTGCTTCAAGTTTGGTTCT
GCTTCCATTTTGGCCTCTTACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042808-exon-sc0003694-1491911889:3006..4027 | TCONS_00042808-exon-sc0003694-1491911889:3006..4027 | Clytia hemisphaerica | exon |
| TCONS_00042808-exon-sc0003694-1510915933:3006..4027 | TCONS_00042808-exon-sc0003694-1510915933:3006..4027 | Clytia hemisphaerica | exon |
| TCONS_00042808-exon-sc0003694-1575043694:3006..4027 | TCONS_00042808-exon-sc0003694-1575043694:3006..4027 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003694 | supercontig | sc0003694:3006..4027 . |
Blast
The following BLAST results are available for this feature:
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