TCONS_00042778 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042778
Unique NameTCONS_00042778
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042778 ID=TCONS_00042778|Name=TCONS_00042778|organism=Clytia hemisphaerica|type=transcript|length=158bp
GTCGTCTGTCCGGAAGTCTCAGGATTTGTTTCGAACTGCTATTCAAACCC
AGCTCGTCTTTTTGTTATTGGAGGCTTCGAGCTGCTCTCACAAGAAGGTA
CGACTCAAGGAGACCCGATCGCTATGGCAGTTTATGCAATCGCCACGATA
CCTCTGCT
Run BLAST on NCBI

transcript from alignment at sc0003667:9557..9714

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042778 ID=TCONS_00042778|Name=TCONS_00042778|organism=Clytia hemisphaerica|type=transcript|length=158bp|location=Sequence derived from alignment at sc0003667:9557..9714 (Clytia hemisphaerica)
AGCAGAGGTATCGTGGCGATTGCATAAACTGCCATAGCGATCGGGTCTCC
TTGAGTCGTACCTTCTTGTGAGAGCAGCTCGAAGCCTCCAATAACAAAAA
GACGAGCTGGGTTTGAATAGCAGTTCGAAACAAATCCTGAGACTTCCGGA
CAGACGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026577XLOC_026577Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042778-exon-sc0003667-1491911889:9557..9714TCONS_00042778-exon-sc0003667-1491911889:9557..9714Clytia hemisphaericaexon
TCONS_00042778-exon-sc0003667-1510915933:9557..9714TCONS_00042778-exon-sc0003667-1510915933:9557..9714Clytia hemisphaericaexon
TCONS_00042778-exon-sc0003667-1575043694:9557..9714TCONS_00042778-exon-sc0003667-1575043694:9557..9714Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003667supercontigsc0003667:9557..9714 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042778 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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