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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042740 ID=TCONS_00042740|Name=TCONS_00042740|organism=Clytia hemisphaerica|type=transcript|length=1388bp
aagaaatttcaccattttcttatattttatattatttaataAATTGGAAT
TCttaaattaacaaaattatataaaaagattATCCTCAACATAATTCCAA
TAAATTTCACAGGATCGAAATTATCTGACAGAATTTCATCCTAACAACTT
TTGCAAACTCCTGAAATTATAAAAAGCATAAAACATAAGACACAGTAAGA
CAATCAACCCTGttatatcattaaaaattaaCCTGAGAAGgaatttttgg
atgaaatttgaccAATACTTGAAATATATcctcaaaattacaaaagtatC
TTAAAGGAaggaattttgttgaaaaaatgaaatttattagGGGATTTAAT
TAAAATCTCTGCCAAAGTTGATTTATTTCATATATTCCCCCAAACTTGTG
CTATGAAACAGGCTTTATTGCTTATTAAATCACAATTTTTGGCCCAAAGA
TATCCTTTGATTGCTAAATTAAAATTCCTGCTATTCCTGactattcttaa
tttttccagTAATCCCCTAAGTTAAATACTTGTCAAAATTCTTCAATTAA
AAGGTAGTCTCCAAAAAAATTTCGTAATCATAGCCTACTAATAAATACTA
CTACTCTTTCCATTCTTATTGTGTCATAAGATTTAAAACAACAAGGAATG
ACATAAACAGTCAAGTTCTGTATCAGTTACAGTAAATCAAGACCAATTAT
TTTGGCAACCATACATATGTTTATCGAACAACGTACAACTTCATCTCGAC
TACATATCCAACGTGGCTTGGGTAAAAGCTTTTACGTAACAGTCATAATT
CAGCTCTGAGTAAGAATCTTTGATACTTTGATTGAAAACGTGCAGGAAAC
CATCAAGCCATACAATTCtcttgttcttgttcttgttcAAAATGTTCCCA
TACATGTACACGTACACATTCACGTCAACATCTTGAATTGGGAATCCTGA
ATaggtataaaaaataaattttcagacaTTTGTTGACAGCAGATTTGGTT
TGTGCAGTCCTATTAAAACACCTGTGAGGCAACATAATCCAAAATACTGT
AATTGCAATAATGACAAATCAAATGATCCAAATCCTGTAGCACTCTACAA
TATATAGCTACTCTGTCACAGATTTTAAAGCCCACATCACAGTGCTATAG
TTATGTTGAATTATGTCACCAGTGTTAGCTGTGCATCCACAAGCAAAAGT
CTTCCAGGCGATCCCACTTCGATATTTCtgttttctatttggttgagtcg
caGGAGGCTTTCAGGCCCATTTTCACAACTATATTGTTATACGTTTTCAA
ttagcgtcccgtcagcaccttgaactgactacccaattcccctcacatgg
catgggttgacccgggcgaaggttcattcacttgccaa Run BLAST on NCBI transcript from alignment at sc0003642:5683..7070 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042740 ID=TCONS_00042740|Name=TCONS_00042740|organism=Clytia hemisphaerica|type=transcript|length=1388bp|location=Sequence derived from alignment at sc0003642:5683..7070 (Clytia hemisphaerica)
ttggcaagtgaatgaaccttcgcccgggtcaacccatgccatgtgagggg
aattgggtagtcagttcaaggtgctgacgggacgctaaTTGAAAACGTAT
AACAATATAGTTGTGAAAATGGGCCTGAAAGCCTCCtgcgactcaaccaa
atagaaaacaGAAATATCGAAGTGGGATCGCCTGGAAGACTTTTGCTTGT
GGATGCACAGCTAACACTGGTGACATAATTCAACATAACTATAGCACTGT
GATGTGGGCTTTAAAATCTGTGACAGAGTAGCTATATATTGTAGAGTGCT
ACAGGATTTGGATCATTTGATTTGTCATTATTGCAATTACAGTATTTTGG
ATTATGTTGCCTCACAGGTGTTTTAATAGGACTGCACAAACCAAATCTGC
TGTCAACAAAtgtctgaaaatttattttttatacctATTCAGGATTCCCA
ATTCAAGATGTTGACGTGAATGTGTACGTGTACATGTATGGGAACATTTT
gaacaagaacaagaacaagaGAATTGTATGGCTTGATGGTTTCCTGCACG
TTTTCAATCAAAGTATCAAAGATTCTTACTCAGAGCTGAATTATGACTGT
TACGTAAAAGCTTTTACCCAAGCCACGTTGGATATGTAGTCGAGATGAAG
TTGTACGTTGTTCGATAAACATATGTATGGTTGCCAAAATAATTGGTCTT
GATTTACTGTAACTGATACAGAACTTGACTGTTTATGTCATTCCTTGTTG
TTTTAAATCTTATGACACAATAAGAATGGAAAGAGTAGTAGTATTTATTA
GTAGGCTATGATTACGAAATTTTTTTGGAGACTACCTTTTAATTGAAGAA
TTTTGACAAGTATTTAACTTAGGGGATTActggaaaaattaagaatagtC
AGGAATAGCAGGAATTTTAATTTAGCAATCAAAGGATATCTTTGGGCCAA
AAATTGTGATTTAATAAGCAATAAAGCCTGTTTCATAGCACAAGTTTGGG
GGAATATATGAAATAAATCAACTTTGGCAGAGATTTTAATTAAATCCCct
aataaatttcattttttcaacaaaattcctTCCTTTAAGatacttttgta
attttgaggATATATTTCAAGTATTggtcaaatttcatccaaaaattcCT
TCTCAGGttaatttttaatgatataaCAGGGTTGATTGTCTTACTGTGTC
TTATGTTTTATGCTTTTTATAATTTCAGGAGTTTGCAAAAGTTGTTAGGA
TGAAATTCTGTCAGATAATTTCGATCCTGTGAAATTTATTGGAATTATGT
TGAGGATaatctttttatataattttgttaatttaaGAATTCCAATTtat
taaataatataaaatataagaaaatggtgaaatttctt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042740-exon-sc0003642-1491911889:5683..7070 | TCONS_00042740-exon-sc0003642-1491911889:5683..7070 | Clytia hemisphaerica | exon |
| TCONS_00042740-exon-sc0003642-1510915933:5683..7070 | TCONS_00042740-exon-sc0003642-1510915933:5683..7070 | Clytia hemisphaerica | exon |
| TCONS_00042740-exon-sc0003642-1575043694:5683..7070 | TCONS_00042740-exon-sc0003642-1575043694:5683..7070 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003642 | supercontig | sc0003642:5683..7070 . |
Blast
The following BLAST results are available for this feature:
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