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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042735 ID=TCONS_00042735|Name=TCONS_00042735|organism=Clytia hemisphaerica|type=transcript|length=341bp
GGGGATTCAaagtttcttaaatttttgatgcCATAACATCCAACATGCCA
GGCGAAGAAAACAGTTGATGTATTAAGGAACATTTAAGCAggATTATTCG
AACGAGCAAAGGAGAAAGTCGTAAAGATTTTCTACTGTAATTTTACATTT
GCTGAATAAAGACTTATGGGACATTACTTTTTGTGCAAAGCAGCAAAGTT
GTATTCAAATGACCTGGAATGTCAAAGCTTTAGATTGGAGCTAGCAACAA
GCCTTGGATAAATCACTTATGATTACGAACAAAAGGACATTGCGGAGAGG
ACAACAAACAAGTGAAAATAGTTTTTGTAGAAATAAATTTG Run BLAST on NCBI transcript from alignment at sc0003638:6938..8364- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042735 ID=TCONS_00042735|Name=TCONS_00042735|organism=Clytia hemisphaerica|type=transcript|length=1427bp|location=Sequence derived from alignment at sc0003638:6938..8364- (Clytia hemisphaerica)
GGGGATTCAAAGTTTCTTAAATTTTTGATGCCATAACATCCAACATGCCA
GGCGAAGAAAACAGTTGATGTATTAAGGAACATTTAAGCAGTAAGTGAAA
CTTCTATAGTAATCTTTAAAAAGTCTTGAAAATTTTGCATTCCTTTCTAG
CTAAAATTGAGTCAATCTTTAAGTCACAACAGACAGGGATTTAAGAATTC
GCTCTTAGAGGATTTCACACATGTTATTACAGTTTGGAGCGTTGTTTTTT
AGTTTGGTATATTCATTTACATNGCTCTTAGAGGATTTCACACATGTTAT
TACAGTTTGGAGCGTTGTTTTTTAGTTTGGTATTATTCATTCATGCCAAC
ATTTTCATGCTAGACCGAGTTCAAATCAAATCAAACCTCACATTTTAATA
AAATTGCTCGGTTAAAGAGGTTTTATTTCAAATTTTAATATATCCTTTTT
TATCTTTGGATAAGTTGAATCTTTAAGTTACTTGAATGTCTTGAAAATAG
AAGATATATTGATTAGGTGAGCTTTCAACTTGTATTCATATTTTTTTCTT
TAGGGATTATTCGAACGAGCAAAGGAGAAAGTCGTAAAGATTTTCTACTG
TAATTTTACATTTGCTGAATAAAGACTTATGGGACATTACTTTTTGTGCA
AAGCAGCAAAGTTGTATTCAAATGACCTGGAATGTCAAAGGTACGCACTT
TGATTTTATTATTCATATTTCACCTTCATATGTTTTTTCTTTTATAAGCA
TAACGTTTATAAGCATATGCAGGCTCAGTTTTTGGTACCTAAACAATGGC
TCTATTGTTTGAGAACAATAGAATGCTAAGCATAATGCGAGCCTGATGTA
GGTGCAGATACTTGCTCATAAAAAAAACATGTATTACATTTGCTGCATAA
GGGACCGGTGTAGGACATTGCTAACCATTCGAATTTGCAAATAATACACC
CCTGTCTCACATCCCCGGTGGAACTTTTTTCCTCAGTGGGATAAAATTTC
CTGTCAAAATTCACGTGGGAATAAAAATTATATTGTTGCAAGTTCCAAAA
TTAAAAACTCCATTCGGGATGGTTTTGGAGTGCAGTTTTTAAACATTAAT
TTTCGGATTGGGATGAAATCATAATCAATTTCTCAGTGGGGCTGAAATTC
CCAGTAATTGTTCTACCATGGACGAAATTTTTGCCAAATTTTCCAGTGGG
GCTGCGATCCCAGCGGGTCTGTGACACAGGGGTTTAATAATTAATAAAAA
TTAATTAAACCTTGTAACAATTTCAATATATATTTCTTATTTTTGCTTTG
GTCTTTCTTACAGCTTTAGATTGGAGCTAGCAACAAGCCTTGGATAAATC
ACTTATGATTACGAACAAAAGGACATTGCGGAGAGGACAACAAACAAGTG
AAAATAGTTTTTGTAGAAATAAATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042735-exon-sc0003638-1575043694:8275..8364 | TCONS_00042735-exon-sc0003638-1575043694:8275..8364 | Clytia hemisphaerica | exon |
| TCONS_00042735-exon-sc0003638-1575043694:7675..7811 | TCONS_00042735-exon-sc0003638-1575043694:7675..7811 | Clytia hemisphaerica | exon |
| TCONS_00042735-exon-sc0003638-1575043694:6938..7051 | TCONS_00042735-exon-sc0003638-1575043694:6938..7051 | Clytia hemisphaerica | exon |
| TCONS_00042735-exon-sc0003638-1510915933:8275..8364 | TCONS_00042735-exon-sc0003638-1510915933:8275..8364 | Clytia hemisphaerica | exon |
| TCONS_00042735-exon-sc0003638-1510915933:7675..7811 | TCONS_00042735-exon-sc0003638-1510915933:7675..7811 | Clytia hemisphaerica | exon |
| TCONS_00042735-exon-sc0003638-1510915933:6938..7051 | TCONS_00042735-exon-sc0003638-1510915933:6938..7051 | Clytia hemisphaerica | exon |
| TCONS_00042735-exon-sc0003638-1491911889:8275..8364 | TCONS_00042735-exon-sc0003638-1491911889:8275..8364 | Clytia hemisphaerica | exon |
| TCONS_00042735-exon-sc0003638-1491911889:7675..7811 | TCONS_00042735-exon-sc0003638-1491911889:7675..7811 | Clytia hemisphaerica | exon |
| TCONS_00042735-exon-sc0003638-1491911889:6938..7051 | TCONS_00042735-exon-sc0003638-1491911889:6938..7051 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003638 | supercontig | sc0003638:6938..8364 - |
Blast
The following BLAST results are available for this feature:
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