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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042726 ID=TCONS_00042726|Name=TCONS_00042726|organism=Clytia hemisphaerica|type=transcript|length=725bp
GTGGAATTAACCGTCACTCCATCAAAGTTTGAACAATTAAAGAAGTGTGG
CTTGCTTCCAGCCAACGCAGGTCAACCATCAAAAGTTGAATCAAGCTTAG
CTAAAAACAgccatcataaaaaagttagCCAAAAGTTGGCTCCCAAAATG
GTTACTTTTGTCGATCGAAATGGCGTGGAGTTAACCGTCACTCCATCAAA
GTTTGAACAATTAAAGAAGTGTGGCTTGCTTCCAGCCAACGCAGGCCAAC
CATCGAAAGTTAAGTCAAACTTAGCAAAATACAGCCATCTTAAGAAGGTT
AGCGAAAAGTTGGCACCCAAAATGGTTACTTTTGTCGATCGAAATGGCGT
GGAATTAACACTCACTCCATCAAAGTTTGAACAATTAAAGAAGTGTGGAT
TGCTTCCAGCCAACACAGGTCAACCATCAAAAGTTAAGTCAAACTTAGCA
AAAAACAgccatcataaaaaagttacCGAAAAGTTGGCGCCCAAGGTGGT
CACAGAAAACAAGAGCGAAGATGAACAAAGCCTTGGCATATCAAAAGAAC
GTTTAGCGTTCGCACAACAACTCATTAAGGAAGCCCAAGAGGCTCCGTTG
CCCGAAGATGACGGTCGATGGTGAACTCTTCTCCGCATCAAAAACATAAA
TAATAAACAACCAAAACCTACAAACTCCtgaaattattttgcattcAATG
TAAATATAAATCTGTATAATTAAAT Run BLAST on NCBI transcript from alignment at sc0003632:10438..11405- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042726 ID=TCONS_00042726|Name=TCONS_00042726|organism=Clytia hemisphaerica|type=transcript|length=968bp|location=Sequence derived from alignment at sc0003632:10438..11405- (Clytia hemisphaerica)
GTGGAATTAACCGTCACTCCATCAAAGTTTGAACAATTAAAGAAGTGTGG
CTTGCTTCCAGCCAACGCAGGTCAAGCATCGAAAGTTAAGTCAAACTTAG
CAAAATACAGCCATCATAAAAAGGTTAGCGAAAAGTTGGCACCCAAAATG
GTTACTTTTGTCGATCGAAATGGCGTGGAATTAACACTCACTCCATCAAA
GTTTGAACAATTGNAGATGGTCACCTTTGTGGATCGAAATGGTGTGGAAT
TAACAGTCACTCCATCAAAGTTTGAACAATTAAAGAAGTGTGGCTTGCTT
CCAGCCAACGCAGGTCAACCATCAAAAGTTGAATCAAGCTTAGCTAAAAA
CAGCCATCATAAAAAAGTTAGCCAAAAGTTGGCTCCCAAAATGGTTACTT
TTGTCGATCGAAATGGCGTGGAGTTAACCGTCACTCCATCAAAGTTTGAA
CAATTAAAGAAGTGTGGCTTGCTTCCAGCCAACGCAGGCCAACCATCGAA
AGTTAAGTCAAACTTAGCAAAATACAGCCATCTTAAGAAGGTTAGCGAAA
AGTTGGCACCCAAAATGGTTACTTTTGTCGATCGAAATGGCGTGGAATTA
ACACTCACTCCATCAAAGTTTGAACAATTAAAGAAGTGTGGATTGCTTCC
AGCCAACACAGGTCAACCATCAAAAGTTAAGTCAAACTTAGCAAAAAACA
GCCATCATAAAAAAGTTACCGAAAAGTTGGCGCCCAAGGTGGTCACAGAA
AACAAGAGCGAAGATGAACAAAGCCTTGGCATATCAAAAGAACGTTTAGC
GTTCGCACAACAACTCATTAAGGAAGCCCAAGAGGCTCCGTTGCCCGAAG
ATGACGGTCGATGGTGAACTCTTCTCCGCATCAAAAACATAAATAATAAA
CAACCAAAACCTACAAACTCCTGAAATTATTTTGCATTCAATGTAAATAT
AAATCTGTATAATTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042726-exon-sc0003632-1575043694:11336..11405 | TCONS_00042726-exon-sc0003632-1575043694:11336..11405 | Clytia hemisphaerica | exon |
| TCONS_00042726-exon-sc0003632-1575043694:10438..11092 | TCONS_00042726-exon-sc0003632-1575043694:10438..11092 | Clytia hemisphaerica | exon |
| TCONS_00042726-exon-sc0003632-1510915933:11336..11405 | TCONS_00042726-exon-sc0003632-1510915933:11336..11405 | Clytia hemisphaerica | exon |
| TCONS_00042726-exon-sc0003632-1510915933:10438..11092 | TCONS_00042726-exon-sc0003632-1510915933:10438..11092 | Clytia hemisphaerica | exon |
| TCONS_00042726-exon-sc0003632-1491911889:11336..11405 | TCONS_00042726-exon-sc0003632-1491911889:11336..11405 | Clytia hemisphaerica | exon |
| TCONS_00042726-exon-sc0003632-1491911889:10438..11092 | TCONS_00042726-exon-sc0003632-1491911889:10438..11092 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003632 | supercontig | sc0003632:10438..11405 - |
Blast
The following BLAST results are available for this feature:
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