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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042717 ID=TCONS_00042717|Name=TCONS_00042717|organism=Clytia hemisphaerica|type=transcript|length=1475bp
ttagaatattattatataaaaatatttgtaaaatatttagtatatttatc
aaaataatgaaagatatatcttttttgaaaaaagaagacactgcattgtt
ttatttttgtttttgaagaaaattagcttggaaaaggttgaaatgagtca
aaaaaggtagtaggacccattttcaaggggcctgtggaaatggaggaaca
aaaacttatgaataaagaataagtttttctgaaaggagaaaccccaaata
aaaagaaaatccatttcagcagaaataaaaaattttttttgggacattcc
catgcaaaagaagcaaaaaagtgaaaaaaactacatgaaaatgaaagaac
tagaattagcgattgtgatttttgaattcctcaccctttttctgataNTT
GGAccggaaactttttttcttttagggtCGGCCTAAATATTGTCACTTCT
TCCTTCATCACAAACTGTAGTGTGATATTTTGGTCTCCAATTTCTACagg
tcaaagcaaattttgagtacttgaaacaaatgaaacatttaCATTAGGGC
TATGGATGTCATTAAAAGTCTTTACCCTCATCAAAGACTTAAAATTTCTC
AAAGCCTTTTTGCCTTCATTTATtctccaaaacaaaacaaaatatccatc
caaatatttttgtctaACAACTGCACAGCAGAACTTATGAACTTCAGCAA
ATGTGAATCCGTTTTGCAATGCAGCATCTTCTGATTGGAAAACCCTACCT
TATTGCCAGAggtcaatattttcttttctatgaaaacttggcctctggta
CCCAGGATAGCTGTCGCTAAAGTCGTTTAGGAGAACGTGacggtctattg
aataacaaattactccacatacaatGCTTTCCTTCAGCACTTCAGTACTA
ACAGGATAAATTATCTTCTCCCTAGGTAACTGCTGTGTTGTGAACAACAA
AACAAGATGACATTATCTTTAAAAAGGTTATTCAATCAAAAGACCATTGC
GTTCTCCAAAACTACTATTGAGCTGCCATCTTTACGATACAGCTGCAGGC
AAATTTCCAGGGTTTTGAGCTGCTacggtttttatttcaaagctTGAGTT
TGAATTCAGTTTGAAGAACAAAATAATCAAACCAGGCTCTGTTTAATTAG
TTGGGAActattaaaacacaaagaattaaccTCAGAATGGGCTTTTTCTG
TTAATAAGGGCCTACCACATCAAATTTTTGTCATGATTCTCATGGCTCAT
GTACAAAAATTATGATTGAGTTTCaaatttcaagcaaagattgagTTTAT
GCAACCGTTACTTGGTAGCAGAAAAGGCCTGGAAATTTGCCTGAGCTGTT
TTGCTTTCAACAAGCGCagaaaagatagagctttcttTTTGTGCCACCTG
CTTTTCCAGATGACACTTACATTTCTTAAGTTATGATCCAGACTCTCCCA
CTACTAAATACAACCAAAAAGTGGA Run BLAST on NCBI transcript from alignment at sc0003623:575..2049 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042717 ID=TCONS_00042717|Name=TCONS_00042717|organism=Clytia hemisphaerica|type=transcript|length=1475bp|location=Sequence derived from alignment at sc0003623:575..2049 (Clytia hemisphaerica)
TCCACTTTTTGGTTGTATTTAGTAGTGGGAGAGTCTGGATCATAACTTAA
GAAATGTAAGTGTCATCTGGAAAAGCAGGTGGCACAAAaagaaagctcta
tcttttctGCGCTTGTTGAAAGCAAAACAGCTCAGGCAAATTTCCAGGCC
TTTTCTGCTACCAAGTAACGGTTGCATAAActcaatctttgcttgaaatt
tGAAACTCAATCATAATTTTTGTACATGAGCCATGAGAATCATGACAAAA
ATTTGATGTGGTAGGCCCTTATTAACAGAAAAAGCCCATTCTGAggttaa
ttctttgtgttttaatagTTCCCAACTAATTAAACAGAGCCTGGTTTGAT
TATTTTGTTCTTCAAACTGAATTCAAACTCAagctttgaaataaaaaccg
tAGCAGCTCAAAACCCTGGAAATTTGCCTGCAGCTGTATCGTAAAGATGG
CAGCTCAATAGTAGTTTTGGAGAACGCAATGGTCTTTTGATTGAATAACC
TTTTTAAAGATAATGTCATCTTGTTTTGTTGTTCACAACACAGCAGTTAC
CTAGGGAGAAGATAATTTATCCTGTTAGTACTGAAGTGCTGAAGGAAAGC
attgtatgtggagtaatttgttattcaatagaccgtCACGTTCTCCTAAA
CGACTTTAGCGACAGCTATCCTGGGtaccagaggccaagttttcatagaa
aagaaaatattgaccTCTGGCAATAAGGTAGGGTTTTCCAATCAGAAGAT
GCTGCATTGCAAAACGGATTCACATTTGCTGAAGTTCATAAGTTCTGCTG
TGCAGTTGTtagacaaaaatatttggatggatattttgttttgttttgga
gaATAAATGAAGGCAAAAAGGCTTTGAGAAATTTTAAGTCTTTGATGAGG
GTAAAGACTTTTAATGACATCCATAGCCCTAATGtaaatgtttcatttgt
ttcaagtactcaaaatttgctttgacctGTAGAAATTGGAGACCAAAATA
TCACACTACAGTTTGTGATGAAGGAAGAAGTGACAATATTTAGGCCGacc
ctaaaagaaaaaaagtttccggTCCAANtatcagaaaaagggtgaggaat
tcaaaaatcacaatcgctaattctagttctttcattttcatgtagttttt
ttcacttttttgcttcttttgcatgggaatgtcccaaaaaaaatttttta
tttctgctgaaatggattttctttttatttggggtttctcctttcagaaa
aacttattctttattcataagtttttgttcctccatttccacaggcccct
tgaaaatgggtcctactaccttttttgactcatttcaaccttttccaagc
taattttcttcaaaaacaaaaataaaacaatgcagtgtcttcttttttca
aaaaagatatatctttcattattttgataaatatactaaatattttacaa
atatttttatataataatattctaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042717-exon-sc0003623-1491911889:575..2049 | TCONS_00042717-exon-sc0003623-1491911889:575..2049 | Clytia hemisphaerica | exon |
| TCONS_00042717-exon-sc0003623-1510915933:575..2049 | TCONS_00042717-exon-sc0003623-1510915933:575..2049 | Clytia hemisphaerica | exon |
| TCONS_00042717-exon-sc0003623-1575043694:575..2049 | TCONS_00042717-exon-sc0003623-1575043694:575..2049 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003623 | supercontig | sc0003623:575..2049 . |
Blast
The following BLAST results are available for this feature:
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