TCONS_00042697 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042697
Unique NameTCONS_00042697
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1589

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042697 ID=TCONS_00042697|Name=TCONS_00042697|organism=Clytia hemisphaerica|type=transcript|length=1589bp
ATTATCGATGAAAATAGTCTTTGATTTacgcgcgaaaaaaaaattgcaaa
aatgaaagtgaaagtagaaattttttttggaaagtaaAGAAGAtgggaag
aaaaaagaaattttttaaataataatcATGTCGTTTTGTAGATTATGTAA
GGAACCTTACAAAGACACTGAAACGAGTAGAGCTGCGAGACATAatattt
ataaaagaaaatcagacgagaatgaaaatttaaaaactagGATTTTTAAT
GTGACTGGAATCGAACTAGAACAAGGCACCAACAAAGCCGAAACAATTTG
TAGAGCATGTTTTCGAAAAATTCCAGTATTGGAGAAAGCCAAAAATACTC
TACGTGAGTGGAACGCTGAACCAAACACCAACAATGATAATGAATTACAT
GGTTTTGATGACCAGATCAATCTAAAGTCCTTGACGTTTTCGTGCTTTGA
AGAGGCTCGTAAATTGGAGAACGACACACTCTTGACAGACACaagcaaag
aaaatattttacaattCAACGATAAGATCTTTTGTGATAAAGTCGAAGAA
AAGTGTCCTACATTAGCTGCATGCATCAAAGGAAGCCTCGGAATTCTGGT
CGATGACAAAGAGCAAACTAAACCATGCCGAACGTCTATTTATGGGTCAA
TTTTTAAAACACGATATTCAAAACGAGGTTGTATCGTTGCTTCACGTAAC
GACCAACTTTTAGTTGCTGGAGGTATGAAGAAAAGGGGTTTCTCATGGAC
CAACAAACTTGGCGTTAGCAACTCGTACAACACGGCATTGAAAAGGAACC
GAGAAATGGGAGACGACTATGATAGGGAGGCGAAACGGTGGAAGGCGTCG
TGGGAATACGAATACAGTCAAATGAAATTGGCAGGATTAGATCCAGCGAA
TCCGGATGATGTTAAAACATACAGACAAGAACATGGACGCCCAGACGATT
ATTCGATTGTCAGTGACAACCTCGATTTTGAGCAACATGCAAGATTTCAA
GACATTAAAAACCACAACAAATCAATTCATTGGTTACATTCGATGGCTGT
AAAAAGCAGAACAACACCTAAAGAGGAGGTAATCCAAGAAGCTAATTTTG
AACAACGTGATCTACTTCCTGACGCTCACACTTTCGAAACAATCTATGAA
ACAAACAAGATATTGGTTGCAAGGATATTGGTCACGCACTTTCCggcttt
taaaatgttttcaaaaaacgtTTGTGGTCACATCAAGCATCCATACTCAG
AGGAAATGGCAAAGAAATCGGAGATCgTACCACTTGGCTTATTGTTCAAA
GCAGAAAACAAAACTGGAGAAATGGTCGACATTCTAAAAGAGCTTACAAA
TCGTTATGTTCCGAAAACAAAACTCGAGGATGACACTGTTGAGgTGATTC
GGTCTATCGTATTTGGAGGAGACCAGCTTACAGAAGAAAGGGCATCCAAT
GCTCAGAGGGGTTTCCTTGATGGCtcaacaaaatatgaaaaacttcAGGG
ACTGCAACCAACCTTCGAAGGATGGCATACAAAAAGATTGCTATATAAAC
TTAAATTCAAACAATTTGGTAAAGAGTCATCACCTAAAN
Run BLAST on NCBI

protein sequence of TCONS_00042697-protein

>TCONS_00042697-protein ID=TCONS_00042697-protein|Name=TCONS_00042697-protein|organism=Clytia hemisphaerica|type=polypeptide|length=487bp
MSFCRLCKEPYKDTETSRAARHNIYKRKSDENENLKTRIFNVTGIELEQG
TNKAETICRACFRKIPVLEKAKNTLREWNAEPNTNNDNELHGFDDQINLK
SLTFSCFEEARKLENDTLLTDTSKENILQFNDKIFCDKVEEKCPTLAACI
KGSLGILVDDKEQTKPCRTSIYGSIFKTRYSKRGCIVASRNDQLLVAGGM
KKRGFSWTNKLGVSNSYNTALKRNREMGDDYDREAKRWKASWEYEYSQMK
LAGLDPANPDDVKTYRQEHGRPDDYSIVSDNLDFEQHARFQDIKNHNKSI
HWLHSMAVKSRTTPKEEVIQEANFEQRDLLPDAHTFETIYETNKILVARI
LVTHFPAFKMFSKNVCGHIKHPYSEEMAKKSEIVPLGLLFKAENKTGEMV
DILKELTNRYVPKTKLEDDTVEVIRSIVFGGDQLTEERASNAQRGFLDGS
TKYEKLQGLQPTFEGWHTKRLLYKLKFKQFGKESSPK
Run BLAST on NCBI

transcript from alignment at sc0003611:6409..9398+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042697 ID=TCONS_00042697|Name=TCONS_00042697|organism=Clytia hemisphaerica|type=transcript|length=2990bp|location=Sequence derived from alignment at sc0003611:6409..9398+ (Clytia hemisphaerica)
ATTATCGATGAAAATAGTCTTTGATTTacgcgcgaaaaaaaaattgcaaa
aatgaaagtgaaagtagaaattttttttggaaagtaaAGAAGAtgggaag
aaaaaagaaattttttaaataataatcATGTCGTTTTGTAGATTATGTAA
GGAACCTTACAAAGACACTGAAACGAGTAGAGCTGCGAGACATAatattt
ataaaagaaaatcagacgagaatgaaaatttaaaaactagGATTTTTAAT
GTGACTGGAATCGAACTAGAACAAGGCACCAACAAAGCCGAAACAATTTG
TAGAGCATGTTTTCGAAAAATTCCAGTATTGGAGAAAGCCAAAAATACTC
TACGTGAGTGGAACGCTGAACCAAACACCAACAATGATAATGAATTACAT
GGTTTTGATGACCAGGTaaataataatttcaatgattttagatcaatttt
caaaatattgtgaaggggggggggctggagGGTGTAAGCCTTTTCTGATA
CTTACTCCCAGACATTTTGCATTTTCGATCCCGGACAGTAGTTTTACCCC
TGGAAAACTAATTTGATCCCCGGACATCTTAATTTACCCCCAGACACCTC
AAATTTACTCCTGGGATTGTAAATTTATCCCTGGAAATGGGTTGATTTCC
TTTATTCCTTGTCACCCCCGGACACATAGCCAACCCCTTCCCCTGGGACG
TGGGTGGgagaatttttataaaaattatatgaaaagaaAGAACATGCGTT
TTTTGTCACGAGGAAAGAGTTTGAAGGTTCAAACGATTAATAGAGATCAT
GGAGAgggaaaagttgaaaatttaaaattaatcaTTGTTGTACAATTCAG
ATCAATCTAAAGTCCTTGACGTTTTCGTGCTTTGAAGAGGCTCGTAAATT
GGAGAACGACACACTCTTGACAGACACaagcaaagaaaatattttacaat
tCAACGATAAGATCTTTTGTGATAAAGTCGAAGAAAAGTGTCCTACATTA
GCTGCATGCATCAAAGGAAGCCTCGGAATTCTGGTCGATGACAAAGAGCA
AACTAAACCATGCCGAACGTCTATTTATGGGTCAATTTTTAAAACACGGT
AACTTTATAATTTGGCAATTTAACGTTCCcgtgttatttttgattttttc
taaaaaatttagttGCCTAATTACTGTGGTTGTCAGGGTATTAGGAGGCT
CCTATTAGGTTCATCGCTATATAGTACTTTTCTTAATTGACTTTCTCTCC
CAAATCGGTTATTTATTCAAAGCTTCGAATATTAGGACCTTCTAAATATC
ACTTCTGAAAGCAAAAGAAGAGAGCTGAGGGACCTTTACTCTTTTTAGAT
ATTCAAAACGAGGTTGTATCGTTGCTTCACGTAACGACCAACTTTTAGTT
GCTGGAGGTATGAAGAAAAGGGGTTTCTCATGGACCAACAAACTTGGCGT
TAGCAACTCGTACAACACGGCATTGAAAAGGAACCGAGAAATGGGAGACG
ACTATGATAGGGAGGCGAAACGGTGGAAGGCGTCGTGGGAATACGAATAC
AGTCAAATGAAATTGGCAGGATTAGATCCAGCGAATCCGGATGATGTTAA
AACATACAGACAAGAACATGGACGCCCAGACGATTATTCGGTATTTTCAT
CTgtcgaaaaatttatttttagagaAATAAAATCTAGGACtaacgaaaat
tgattttaatgaaaCATTTTATAGAATGTTGTGTCTTTGATGGCATTACA
gataaaatttctctttttattatACAATAACAAAAATCTTTGGTAAATGA
AAATCATACTAcatctaaaaatataaacaaaatattaCTATTTAGATTGT
CAGTGACAACCTCGATTTTGAGCAACATGCAAGATTTCAAGACATTAAAA
ACCACAACAAATCAATTCATTGGTTACATTCGATGGCTGTAAAAAGCAGA
ACAACACCTAAAGGTGATTTTGTTGGAGAAATTTACAAAAAGGCACTAAG
AGGGGGGGACCTTCTAGTTTAGTAAATGAAACTTTCCCATTGAATTATCA
ACTTCATTTGTTTCTTTCATTCAGAGGAGGTAATCCAAGAAGCTAATTTT
GAACAACGTGATCTACTTCCTGACGCTCACACTTTCGAAACAATCTATGA
AACAAACAAGATATTGGTTGCAAGGATATTGGTCACGCACTTTCCggctt
ttaaaatgttttcaaaaaacgtTTGTGGTCACATCAAGCATCCATACTCA
GAGGAAATGGCAAAGAAATCGGAGATCGTAAGTCGacgaaaagaaaatgt
tttaaaaatttctcaaaaattctaAAGCATACTGAATTGCAAGGTATTTC
TATttcataaaataaatatttctaaaaaataataatctgtcattttattt
tcttaaaggTACCACTTGGCTTATTGTTCAAAGCAGAAAACAAAACTGGA
GAAATGGTCGACATTCTAAAAGAGCTTACAAATCGTTATGTTCCGAAAAC
AAAACTCGAGGATGACACTGTTGAGGTATTAAAATCACTTTGTGAGATTA
TCAATGATATAAGATAAAAATATACGATATGCTAATCATACAGTAagaat
aagaacatattaaaaattgatactttttttcatatttctaggTGATTCGG
TCTATCGTATTTGGAGGAGACCAGCTTACAGAAGAAAGGGCATCCAATGC
TCAGAGGGGTTTCCTTGATGGCtcaacaaaatatgaaaaacttcAGGGAC
TGCAACCAACCTTCGAAGGATGGCATACAAAAAGATTGCTATATAAAGTA
AGAACTCTGAGAGTTTCTTTCCTTTGCACTAGAAATTTAGTATGCaactt
ttcaatttcataaaatgaaTTGAAAGATGCGGATTAAGTATAAACATTAA
AACATATATATTGAGATATTGAATCTAAATTTACAATATAATCATTTTAG
CTTAAATTCAAACAATTTGGTAAAGAGTCATCACCTAAAN

Coding sequence (CDS) from alignment at sc0003611:6409..9398+

>TCONS_00042697 ID=TCONS_00042697|Name=TCONS_00042697|organism=Clytia hemisphaerica|type=CDS|length=11688bp|location=Sequence derived from alignment at sc0003611:6409..9398+ (Clytia hemisphaerica)
ATGTCGTTTTGTAGATTATGTAAGGAACCTTACAAAGACACTGAAACGAG
TAGAGCTGCGAGACATAatatttataaaagaaaatcagacgagaatgaaa
atttaaaaactagGATTTTTAATGTGACTGGAATCGAACTAGAACAAGGC
ACCAACAAAGCCGAAACAATTTGTAGAGCATGTTTTCGAAAAATTCCAGT
ATTGGAGAAAGCCAAAAATACTCTACGTGAGTGGAACGCTGAACCAAACA
CCAACAATGATAATGAATTACATGGTTTTGATGACCAGATCAATCTAAAG
TCCTTGACGTTTTCGTGCTTTGAAGAGGCTCGTAAATTGGAGAACGACAC
ACTCTTGACAGACACaagcaaagaaaatattttacaattCAACGATAAGA
TCTTTTGTGATAAAGTCGAAGAAAAGTGTCCTACATTAGCTGCATGCATC
AAAGGAAGCCTCGGAATTCTGGTCGATGACAAAGAGCAAACTAAACCATG
CCGAACGTCTATTTATGGGTCAATTTTTAAAACACGATATTCAAAACGAG
GTTGTATCGTTGCTTCACGTAACGACCAACTTTTAGTTGCTGGAGGTATG
AAGAAAAGGGGTTTCTCATGGACCAACAAACTTGGCGTTAGCAACTCGTA
CAACACGGCATTGAAAAGGAACCGAGAAATGGGAGACGACTATGATAGGG
AGGCGAAACGGTGGAAGGCGTCGTGGGAATACGAATACAGTCAAATGAAA
TTGGCAGGATTAGATCCAGCGAATCCGGATGATGTTAAAACATACAGACA
AGAACATGGACGCCCAGACGATTATTCGATTGTCAGTGACAACCTCGATT
TTGAGCAACATGCAAGATTTCAAGACATTAAAAACCACAACAAATCAATT
CATTGGTTACATTCGATGGCTGTAAAAAGCAGAACAACACCTAAAGAGGA
GGTAATCCAAGAAGCTAATTTTGAACAACGTGATCTACTTCCTGACGCTC
ACACTTTCGAAACAATCTATGAAACAAACAAGATATTGGTTGCAAGGATA
TTGGTCACGCACTTTCCggcttttaaaatgttttcaaaaaacgtTTGTGG
TCACATCAAGCATCCATACTCAGAGGAAATGGCAAAGAAATCGGAGATCg
TACCACTTGGCTTATTGTTCAAAGCAGAAAACAAAACTGGAGAAATGGTC
GACATTCTAAAAGAGCTTACAAATCGTTATGTTCCGAAAACAAAACTCGA
GGATGACACTGTTGAGgTGATTCGGTCTATCGTATTTGGAGGAGACCAGC
TTACAGAAGAAAGGGCATCCAATGCTCAGAGGGGTTTCCTTGATGGCtca
acaaaatatgaaaaacttcAGGGACTGCAACCAACCTTCGAAGGATGGCA
TACAAAAAGATTGCTATATAAACTTAAATTCAAACAATTTGGTAAAGAGT
CATCACCTAAAATGTCGTTTTGTAGATTATGTAAGGAACCTTACAAAGAC
ACTGAAACGAGTAGAGCTGCGAGACATAatatttataaaagaaaatcaga
cgagaatgaaaatttaaaaactagGATTTTTAATGTGACTGGAATCGAAC
TAGAACAAGGCACCAACAAAGCCGAAACAATTTGTAGAGCATGTTTTCGA
AAAATTCCAGTATTGGAGAAAGCCAAAAATACTCTACGTGAGTGGAACGC
TGAACCAAACACCAACAATGATAATGAATTACATGGTTTTGATGACCAGA
TCAATCTAAAGTCCTTGACGTTTTCGTGCTTTGAAGAGGCTCGTAAATTG
GAGAACGACACACTCTTGACAGACACaagcaaagaaaatattttacaatt
CAACGATAAGATCTTTTGTGATAAAGTCGAAGAAAAGTGTCCTACATTAG
CTGCATGCATCAAAGGAAGCCTCGGAATTCTGGTCGATGACAAAGAGCAA
ACTAAACCATGCCGAACGTCTATTTATGGGTCAATTTTTAAAACACGATA
TTCAAAACGAGGTTGTATCGTTGCTTCACGTAACGACCAACTTTTAGTTG
CTGGAGGTATGAAGAAAAGGGGTTTCTCATGGACCAACAAACTTGGCGTT
AGCAACTCGTACAACACGGCATTGAAAAGGAACCGAGAAATGGGAGACGA
CTATGATAGGGAGGCGAAACGGTGGAAGGCGTCGTGGGAATACGAATACA
GTCAAATGAAATTGGCAGGATTAGATCCAGCGAATCCGGATGATGTTAAA
ACATACAGACAAGAACATGGACGCCCAGACGATTATTCGATTGTCAGTGA
CAACCTCGATTTTGAGCAACATGCAAGATTTCAAGACATTAAAAACCACA
ACAAATCAATTCATTGGTTACATTCGATGGCTGTAAAAAGCAGAACAACA
CCTAAAGAGGAGGTAATCCAAGAAGCTAATTTTGAACAACGTGATCTACT
TCCTGACGCTCACACTTTCGAAACAATCTATGAAACAAACAAGATATTGG
TTGCAAGGATATTGGTCACGCACTTTCCggcttttaaaatgttttcaaaa
aacgtTTGTGGTCACATCAAGCATCCATACTCAGAGGAAATGGCAAAGAA
ATCGGAGATCgTACCACTTGGCTTATTGTTCAAAGCAGAAAACAAAACTG
GAGAAATGGTCGACATTCTAAAAGAGCTTACAAATCGTTATGTTCCGAAA
ACAAAACTCGAGGATGACACTGTTGAGgTGATTCGGTCTATCGTATTTGG
AGGAGACCAGCTTACAGAAGAAAGGGCATCCAATGCTCAGAGGGGTTTCC
TTGATGGCtcaacaaaatatgaaaaacttcAGGGACTGCAACCAACCTTC
GAAGGATGGCATACAAAAAGATTGCTATATAAACTTAAATTCAAACAATT
TGGTAAAGAGTCATCACCTAAAATGTCGTTTTGTAGATTATGTAAGGAAC
CTTACAAAGACACTGAAACGAGTAGAGCTGCGAGACATAatatttataaa
agaaaatcagacgagaatgaaaatttaaaaactagGATTTTTAATGTGAC
TGGAATCGAACTAGAACAAGGCACCAACAAAGCCGAAACAATTTGTAGAG
CATGTTTTCGAAAAATTCCAGTATTGGAGAAAGCCAAAAATACTCTACGT
GAGTGGAACGCTGAACCAAACACCAACAATGATAATGAATTACATGGTTT
TGATGACCAGATCAATCTAAAGTCCTTGACGTTTTCGTGCTTTGAAGAGG
CTCGTAAATTGGAGAACGACACACTCTTGACAGACACaagcaaagaaaat
attttacaattCAACGATAAGATCTTTTGTGATAAAGTCGAAGAAAAGTG
TCCTACATTAGCTGCATGCATCAAAGGAAGCCTCGGAATTCTGGTCGATG
ACAAAGAGCAAACTAAACCATGCCGAACGTCTATTTATGGGTCAATTTTT
AAAACACGATATTCAAAACGAGGTTGTATCGTTGCTTCACGTAACGACCA
ACTTTTAGTTGCTGGAGGTATGAAGAAAAGGGGTTTCTCATGGACCAACA
AACTTGGCGTTAGCAACTCGTACAACACGGCATTGAAAAGGAACCGAGAA
ATGGGAGACGACTATGATAGGGAGGCGAAACGGTGGAAGGCGTCGTGGGA
ATACGAATACAGTCAAATGAAATTGGCAGGATTAGATCCAGCGAATCCGG
ATGATGTTAAAACATACAGACAAGAACATGGACGCCCAGACGATTATTCG
ATTGTCAGTGACAACCTCGATTTTGAGCAACATGCAAGATTTCAAGACAT
TAAAAACCACAACAAATCAATTCATTGGTTACATTCGATGGCTGTAAAAA
GCAGAACAACACCTAAAGAGGAGGTAATCCAAGAAGCTAATTTTGAACAA
CGTGATCTACTTCCTGACGCTCACACTTTCGAAACAATCTATGAAACAAA
CAAGATATTGGTTGCAAGGATATTGGTCACGCACTTTCCggcttttaaaa
tgttttcaaaaaacgtTTGTGGTCACATCAAGCATCCATACTCAGAGGAA
ATGGCAAAGAAATCGGAGATCgTACCACTTGGCTTATTGTTCAAAGCAGA
AAACAAAACTGGAGAAATGGTCGACATTCTAAAAGAGCTTACAAATCGTT
ATGTTCCGAAAACAAAACTCGAGGATGACACTGTTGAGgTGATTCGGTCT
ATCGTATTTGGAGGAGACCAGCTTACAGAAGAAAGGGCATCCAATGCTCA
GAGGGGTTTCCTTGATGGCtcaacaaaatatgaaaaacttcAGGGACTGC
AACCAACCTTCGAAGGATGGCATACAAAAAGATTGCTATATAAACTTAAA
TTCAAACAATTTGGTAAAGAGTCATCACCTAAAATGTCGTTTTGTAGATT
ATGTAAGGAACCTTACAAAGACACTGAAACGAGTAGAGCTGCGAGACATA
atatttataaaagaaaatcagacgagaatgaaaatttaaaaactagGATT
TTTAATGTGACTGGAATCGAACTAGAACAAGGCACCAACAAAGCCGAAAC
AATTTGTAGAGCATGTTTTCGAAAAATTCCAGTATTGGAGAAAGCCAAAA
ATACTCTACGTGAGTGGAACGCTGAACCAAACACCAACAATGATAATGAA
TTACATGGTTTTGATGACCAGATCAATCTAAAGTCCTTGACGTTTTCGTG
CTTTGAAGAGGCTCGTAAATTGGAGAACGACACACTCTTGACAGACACaa
gcaaagaaaatattttacaattCAACGATAAGATCTTTTGTGATAAAGTC
GAAGAAAAGTGTCCTACATTAGCTGCATGCATCAAAGGAAGCCTCGGAAT
TCTGGTCGATGACAAAGAGCAAACTAAACCATGCCGAACGTCTATTTATG
GGTCAATTTTTAAAACACGATATTCAAAACGAGGTTGTATCGTTGCTTCA
CGTAACGACCAACTTTTAGTTGCTGGAGGTATGAAGAAAAGGGGTTTCTC
ATGGACCAACAAACTTGGCGTTAGCAACTCGTACAACACGGCATTGAAAA
GGAACCGAGAAATGGGAGACGACTATGATAGGGAGGCGAAACGGTGGAAG
GCGTCGTGGGAATACGAATACAGTCAAATGAAATTGGCAGGATTAGATCC
AGCGAATCCGGATGATGTTAAAACATACAGACAAGAACATGGACGCCCAG
ACGATTATTCGATTGTCAGTGACAACCTCGATTTTGAGCAACATGCAAGA
TTTCAAGACATTAAAAACCACAACAAATCAATTCATTGGTTACATTCGAT
GGCTGTAAAAAGCAGAACAACACCTAAAGAGGAGGTAATCCAAGAAGCTA
ATTTTGAACAACGTGATCTACTTCCTGACGCTCACACTTTCGAAACAATC
TATGAAACAAACAAGATATTGGTTGCAAGGATATTGGTCACGCACTTTCC
ggcttttaaaatgttttcaaaaaacgtTTGTGGTCACATCAAGCATCCAT
ACTCAGAGGAAATGGCAAAGAAATCGGAGATCgTACCACTTGGCTTATTG
TTCAAAGCAGAAAACAAAACTGGAGAAATGGTCGACATTCTAAAAGAGCT
TACAAATCGTTATGTTCCGAAAACAAAACTCGAGGATGACACTGTTGAGg
TGATTCGGTCTATCGTATTTGGAGGAGACCAGCTTACAGAAGAAAGGGCA
TCCAATGCTCAGAGGGGTTTCCTTGATGGCtcaacaaaatatgaaaaact
tcAGGGACTGCAACCAACCTTCGAAGGATGGCATACAAAAAGATTGCTAT
ATAAACTTAAATTCAAACAATTTGGTAAAGAGTCATCACCTAAAATGTCG
TTTTGTAGATTATGTAAGGAACCTTACAAAGACACTGAAACGAGTAGAGC
TGCGAGACATAatatttataaaagaaaatcagacgagaatgaaaatttaa
aaactagGATTTTTAATGTGACTGGAATCGAACTAGAACAAGGCACCAAC
AAAGCCGAAACAATTTGTAGAGCATGTTTTCGAAAAATTCCAGTATTGGA
GAAAGCCAAAAATACTCTACGTGAGTGGAACGCTGAACCAAACACCAACA
ATGATAATGAATTACATGGTTTTGATGACCAGATCAATCTAAAGTCCTTG
ACGTTTTCGTGCTTTGAAGAGGCTCGTAAATTGGAGAACGACACACTCTT
GACAGACACaagcaaagaaaatattttacaattCAACGATAAGATCTTTT
GTGATAAAGTCGAAGAAAAGTGTCCTACATTAGCTGCATGCATCAAAGGA
AGCCTCGGAATTCTGGTCGATGACAAAGAGCAAACTAAACCATGCCGAAC
GTCTATTTATGGGTCAATTTTTAAAACACGATATTCAAAACGAGGTTGTA
TCGTTGCTTCACGTAACGACCAACTTTTAGTTGCTGGAGGTATGAAGAAA
AGGGGTTTCTCATGGACCAACAAACTTGGCGTTAGCAACTCGTACAACAC
GGCATTGAAAAGGAACCGAGAAATGGGAGACGACTATGATAGGGAGGCGA
AACGGTGGAAGGCGTCGTGGGAATACGAATACAGTCAAATGAAATTGGCA
GGATTAGATCCAGCGAATCCGGATGATGTTAAAACATACAGACAAGAACA
TGGACGCCCAGACGATTATTCGATTGTCAGTGACAACCTCGATTTTGAGC
AACATGCAAGATTTCAAGACATTAAAAACCACAACAAATCAATTCATTGG
TTACATTCGATGGCTGTAAAAAGCAGAACAACACCTAAAGAGGAGGTAAT
CCAAGAAGCTAATTTTGAACAACGTGATCTACTTCCTGACGCTCACACTT
TCGAAACAATCTATGAAACAAACAAGATATTGGTTGCAAGGATATTGGTC
ACGCACTTTCCggcttttaaaatgttttcaaaaaacgtTTGTGGTCACAT
CAAGCATCCATACTCAGAGGAAATGGCAAAGAAATCGGAGATCgTACCAC
TTGGCTTATTGTTCAAAGCAGAAAACAAAACTGGAGAAATGGTCGACATT
CTAAAAGAGCTTACAAATCGTTATGTTCCGAAAACAAAACTCGAGGATGA
CACTGTTGAGgTGATTCGGTCTATCGTATTTGGAGGAGACCAGCTTACAG
AAGAAAGGGCATCCAATGCTCAGAGGGGTTTCCTTGATGGCtcaacaaaa
tatgaaaaacttcAGGGACTGCAACCAACCTTCGAAGGATGGCATACAAA
AAGATTGCTATATAAACTTAAATTCAAACAATTTGGTAAAGAGTCATCAC
CTAAAATGTCGTTTTGTAGATTATGTAAGGAACCTTACAAAGACACTGAA
ACGAGTAGAGCTGCGAGACATAatatttataaaagaaaatcagacgagaa
tgaaaatttaaaaactagGATTTTTAATGTGACTGGAATCGAACTAGAAC
AAGGCACCAACAAAGCCGAAACAATTTGTAGAGCATGTTTTCGAAAAATT
CCAGTATTGGAGAAAGCCAAAAATACTCTACGTGAGTGGAACGCTGAACC
AAACACCAACAATGATAATGAATTACATGGTTTTGATGACCAGATCAATC
TAAAGTCCTTGACGTTTTCGTGCTTTGAAGAGGCTCGTAAATTGGAGAAC
GACACACTCTTGACAGACACaagcaaagaaaatattttacaattCAACGA
TAAGATCTTTTGTGATAAAGTCGAAGAAAAGTGTCCTACATTAGCTGCAT
GCATCAAAGGAAGCCTCGGAATTCTGGTCGATGACAAAGAGCAAACTAAA
CCATGCCGAACGTCTATTTATGGGTCAATTTTTAAAACACGATATTCAAA
ACGAGGTTGTATCGTTGCTTCACGTAACGACCAACTTTTAGTTGCTGGAG
GTATGAAGAAAAGGGGTTTCTCATGGACCAACAAACTTGGCGTTAGCAAC
TCGTACAACACGGCATTGAAAAGGAACCGAGAAATGGGAGACGACTATGA
TAGGGAGGCGAAACGGTGGAAGGCGTCGTGGGAATACGAATACAGTCAAA
TGAAATTGGCAGGATTAGATCCAGCGAATCCGGATGATGTTAAAACATAC
AGACAAGAACATGGACGCCCAGACGATTATTCGATTGTCAGTGACAACCT
CGATTTTGAGCAACATGCAAGATTTCAAGACATTAAAAACCACAACAAAT
CAATTCATTGGTTACATTCGATGGCTGTAAAAAGCAGAACAACACCTAAA
GAGGAGGTAATCCAAGAAGCTAATTTTGAACAACGTGATCTACTTCCTGA
CGCTCACACTTTCGAAACAATCTATGAAACAAACAAGATATTGGTTGCAA
GGATATTGGTCACGCACTTTCCggcttttaaaatgttttcaaaaaacgtT
TGTGGTCACATCAAGCATCCATACTCAGAGGAAATGGCAAAGAAATCGGA
GATCgTACCACTTGGCTTATTGTTCAAAGCAGAAAACAAAACTGGAGAAA
TGGTCGACATTCTAAAAGAGCTTACAAATCGTTATGTTCCGAAAACAAAA
CTCGAGGATGACACTGTTGAGgTGATTCGGTCTATCGTATTTGGAGGAGA
CCAGCTTACAGAAGAAAGGGCATCCAATGCTCAGAGGGGTTTCCTTGATG
GCtcaacaaaatatgaaaaacttcAGGGACTGCAACCAACCTTCGAAGGA
TGGCATACAAAAAGATTGCTATATAAACTTAAATTCAAACAATTTGGTAA
AGAGTCATCACCTAAAATGTCGTTTTGTAGATTATGTAAGGAACCTTACA
AAGACACTGAAACGAGTAGAGCTGCGAGACATAatatttataaaagaaaa
tcagacgagaatgaaaatttaaaaactagGATTTTTAATGTGACTGGAAT
CGAACTAGAACAAGGCACCAACAAAGCCGAAACAATTTGTAGAGCATGTT
TTCGAAAAATTCCAGTATTGGAGAAAGCCAAAAATACTCTACGTGAGTGG
AACGCTGAACCAAACACCAACAATGATAATGAATTACATGGTTTTGATGA
CCAGATCAATCTAAAGTCCTTGACGTTTTCGTGCTTTGAAGAGGCTCGTA
AATTGGAGAACGACACACTCTTGACAGACACaagcaaagaaaatatttta
caattCAACGATAAGATCTTTTGTGATAAAGTCGAAGAAAAGTGTCCTAC
ATTAGCTGCATGCATCAAAGGAAGCCTCGGAATTCTGGTCGATGACAAAG
AGCAAACTAAACCATGCCGAACGTCTATTTATGGGTCAATTTTTAAAACA
CGATATTCAAAACGAGGTTGTATCGTTGCTTCACGTAACGACCAACTTTT
AGTTGCTGGAGGTATGAAGAAAAGGGGTTTCTCATGGACCAACAAACTTG
GCGTTAGCAACTCGTACAACACGGCATTGAAAAGGAACCGAGAAATGGGA
GACGACTATGATAGGGAGGCGAAACGGTGGAAGGCGTCGTGGGAATACGA
ATACAGTCAAATGAAATTGGCAGGATTAGATCCAGCGAATCCGGATGATG
TTAAAACATACAGACAAGAACATGGACGCCCAGACGATTATTCGATTGTC
AGTGACAACCTCGATTTTGAGCAACATGCAAGATTTCAAGACATTAAAAA
CCACAACAAATCAATTCATTGGTTACATTCGATGGCTGTAAAAAGCAGAA
CAACACCTAAAGAGGAGGTAATCCAAGAAGCTAATTTTGAACAACGTGAT
CTACTTCCTGACGCTCACACTTTCGAAACAATCTATGAAACAAACAAGAT
ATTGGTTGCAAGGATATTGGTCACGCACTTTCCggcttttaaaatgtttt
caaaaaacgtTTGTGGTCACATCAAGCATCCATACTCAGAGGAAATGGCA
AAGAAATCGGAGATCgTACCACTTGGCTTATTGTTCAAAGCAGAAAACAA
AACTGGAGAAATGGTCGACATTCTAAAAGAGCTTACAAATCGTTATGTTC
CGAAAACAAAACTCGAGGATGACACTGTTGAGgTGATTCGGTCTATCGTA
TTTGGAGGAGACCAGCTTACAGAAGAAAGGGCATCCAATGCTCAGAGGGG
TTTCCTTGATGGCtcaacaaaatatgaaaaacttcAGGGACTGCAACCAA
CCTTCGAAGGATGGCATACAAAAAGATTGCTATATAAACTTAAATTCAAA
CAATTTGGTAAAGAGTCATCACCTAAAATGTCGTTTTGTAGATTATGTAA
GGAACCTTACAAAGACACTGAAACGAGTAGAGCTGCGAGACATAatattt
ataaaagaaaatcagacgagaatgaaaatttaaaaactagGATTTTTAAT
GTGACTGGAATCGAACTAGAACAAGGCACCAACAAAGCCGAAACAATTTG
TAGAGCATGTTTTCGAAAAATTCCAGTATTGGAGAAAGCCAAAAATACTC
TACGTGAGTGGAACGCTGAACCAAACACCAACAATGATAATGAATTACAT
GGTTTTGATGACCAGATCAATCTAAAGTCCTTGACGTTTTCGTGCTTTGA
AGAGGCTCGTAAATTGGAGAACGACACACTCTTGACAGACACaagcaaag
aaaatattttacaattCAACGATAAGATCTTTTGTGATAAAGTCGAAGAA
AAGTGTCCTACATTAGCTGCATGCATCAAAGGAAGCCTCGGAATTCTGGT
CGATGACAAAGAGCAAACTAAACCATGCCGAACGTCTATTTATGGGTCAA
TTTTTAAAACACGATATTCAAAACGAGGTTGTATCGTTGCTTCACGTAAC
GACCAACTTTTAGTTGCTGGAGGTATGAAGAAAAGGGGTTTCTCATGGAC
CAACAAACTTGGCGTTAGCAACTCGTACAACACGGCATTGAAAAGGAACC
GAGAAATGGGAGACGACTATGATAGGGAGGCGAAACGGTGGAAGGCGTCG
TGGGAATACGAATACAGTCAAATGAAATTGGCAGGATTAGATCCAGCGAA
TCCGGATGATGTTAAAACATACAGACAAGAACATGGACGCCCAGACGATT
ATTCGATTGTCAGTGACAACCTCGATTTTGAGCAACATGCAAGATTTCAA
GACATTAAAAACCACAACAAATCAATTCATTGGTTACATTCGATGGCTGT
AAAAAGCAGAACAACACCTAAAGAGGAGGTAATCCAAGAAGCTAATTTTG
AACAACGTGATCTACTTCCTGACGCTCACACTTTCGAAACAATCTATGAA
ACAAACAAGATATTGGTTGCAAGGATATTGGTCACGCACTTTCCggcttt
taaaatgttttcaaaaaacgtTTGTGGTCACATCAAGCATCCATACTCAG
AGGAAATGGCAAAGAAATCGGAGATCgTACCACTTGGCTTATTGTTCAAA
GCAGAAAACAAAACTGGAGAAATGGTCGACATTCTAAAAGAGCTTACAAA
TCGTTATGTTCCGAAAACAAAACTCGAGGATGACACTGTTGAGgTGATTC
GGTCTATCGTATTTGGAGGAGACCAGCTTACAGAAGAAAGGGCATCCAAT
GCTCAGAGGGGTTTCCTTGATGGCtcaacaaaatatgaaaaacttcAGGG
ACTGCAACCAACCTTCGAAGGATGGCATACAAAAAGATTGCTATATAAAC
TTAAATTCAAACAATTTGGTAAAGAGTCATCACCTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026508XLOC_026508Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042697-exon-sc0003611-1491911889:6409..6823TCONS_00042697-exon-sc0003611-1491911889:6409..6823Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1510915933:6409..6823TCONS_00042697-exon-sc0003611-1510915933:6409..6823Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1575043694:6409..6823TCONS_00042697-exon-sc0003611-1575043694:6409..6823Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1491911889:7259..7506TCONS_00042697-exon-sc0003611-1491911889:7259..7506Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1510915933:7259..7506TCONS_00042697-exon-sc0003611-1510915933:7259..7506Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1575043694:7259..7506TCONS_00042697-exon-sc0003611-1575043694:7259..7506Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1491911889:7757..8048TCONS_00042697-exon-sc0003611-1491911889:7757..8048Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1510915933:7757..8048TCONS_00042697-exon-sc0003611-1510915933:7757..8048Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1575043694:7757..8048TCONS_00042697-exon-sc0003611-1575043694:7757..8048Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1491911889:8254..8371TCONS_00042697-exon-sc0003611-1491911889:8254..8371Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1510915933:8254..8371TCONS_00042697-exon-sc0003611-1510915933:8254..8371Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1575043694:8254..8371TCONS_00042697-exon-sc0003611-1575043694:8254..8371Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1491911889:8483..8685TCONS_00042697-exon-sc0003611-1491911889:8483..8685Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1510915933:8483..8685TCONS_00042697-exon-sc0003611-1510915933:8483..8685Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1575043694:8483..8685TCONS_00042697-exon-sc0003611-1575043694:8483..8685Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1491911889:8817..8933TCONS_00042697-exon-sc0003611-1491911889:8817..8933Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1510915933:8817..8933TCONS_00042697-exon-sc0003611-1510915933:8817..8933Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1575043694:8817..8933TCONS_00042697-exon-sc0003611-1575043694:8817..8933Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1491911889:9050..9205TCONS_00042697-exon-sc0003611-1491911889:9050..9205Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1510915933:9050..9205TCONS_00042697-exon-sc0003611-1510915933:9050..9205Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1575043694:9050..9205TCONS_00042697-exon-sc0003611-1575043694:9050..9205Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1491911889:9359..9398TCONS_00042697-exon-sc0003611-1491911889:9359..9398Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1510915933:9359..9398TCONS_00042697-exon-sc0003611-1510915933:9359..9398Clytia hemisphaericaexon
TCONS_00042697-exon-sc0003611-1575043694:9359..9398TCONS_00042697-exon-sc0003611-1575043694:9359..9398Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042697-proteinTCONS_00042697-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003611supercontigsc0003611:6409..9398 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.955463	0.265982	0	0.03389	4.78332	3.86076	4.36436	4.16935	1.69221	2.85333	1.26305	2.08753	2.13293	0.893774	2.16558	1.97407	2.95038	1.65654	0.474308	0.981767	1.65017	1.22179	1.15578	1.09832	1.25645	2.93433	1.01892	0	0.859115	0.458713
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012934Znf_AD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0008270 zinc ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042697 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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