TCONS_00042680 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042680
Unique NameTCONS_00042680
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length198

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042680 ID=TCONS_00042680|Name=TCONS_00042680|organism=Clytia hemisphaerica|type=transcript|length=198bp
GTCGATGGTCAGGCTTCAACTGTCCTTGCTGGAGAGAATGGACTCTCAAA
ACCACATGGCACAAGGAGGAGAGCTCACTCGGCCCAATCTCCCAGCAAGG
AACTCAAAGGAGAAGTGCACTGGGGGTCAGTAGAGATCTATACTAGCCTC
ATGTTCAAACAATGATCTCTACTATCAGGGCAAGATGGTAGACCCAGC
Run BLAST on NCBI

transcript from alignment at sc0003596:5179..5376

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042680 ID=TCONS_00042680|Name=TCONS_00042680|organism=Clytia hemisphaerica|type=transcript|length=198bp|location=Sequence derived from alignment at sc0003596:5179..5376 (Clytia hemisphaerica)
GCTGGGTCTACCATCTTGCCCTGATAGTAGAGATCATTGTTTGAACATGA
GGCTAGTATAGATCTCTACTGACCCCCAGTGCACTTCTCCTTTGAGTTCC
TTGCTGGGAGATTGGGCCGAGTGAGCTCTCCTCCTTGTGCCATGTGGTTT
TGAGAGTCCATTCTCTCCAGCAAGGACAGTTGAAGCCTGACCATCGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026493XLOC_026493Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042680-exon-sc0003596-1491911889:5179..5376TCONS_00042680-exon-sc0003596-1491911889:5179..5376Clytia hemisphaericaexon
TCONS_00042680-exon-sc0003596-1510915933:5179..5376TCONS_00042680-exon-sc0003596-1510915933:5179..5376Clytia hemisphaericaexon
TCONS_00042680-exon-sc0003596-1575043694:5179..5376TCONS_00042680-exon-sc0003596-1575043694:5179..5376Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003596supercontigsc0003596:5179..5376 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042680 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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