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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042676 ID=TCONS_00042676|Name=TCONS_00042676|organism=Clytia hemisphaerica|type=transcript|length=344bp
GTTTCagctaagaacaaatttctgtATCTTGTAGTATCTTTTTTGCAGTT
GAACACTTCTTTGGAATATACAAAATCGTTATGTTTTTTTAATGGCGCTT
TCAACACAAACACTTGGTATCAATACATGGAGTATGCAGCGAAATGGAAC
CCCTTTTGATCGTGGTTGAACACATGTGCCATGGATCATTACACACATAT
TTACGCGAACGTAGGGAGTTGATACGCAAACAAGACTTATTAACGGATAT
GATTTTCCAAGTAGTCAGCGCTATGAAGTACCTTGAAGAGGAAAAGTTCA
TTCACAGAGATTTGGTAAAAGAATCTTTCTAAGctatatggaca Run BLAST on NCBI transcript from alignment at sc0003592:3412..4256- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042676 ID=TCONS_00042676|Name=TCONS_00042676|organism=Clytia hemisphaerica|type=transcript|length=845bp|location=Sequence derived from alignment at sc0003592:3412..4256- (Clytia hemisphaerica)
GTTTCAGCTAAGAACAAATTTCTGTATCTTGTAGTATCTTTTTTGCAGTT
GAACACTTCTTTGGAATATACAAAATCGTTATGTTTTTTTAATGGTAAAG
TCTCATGATAAAATTATTCCTTTTTTTAGCGTTGAAGTTTTTTATTCATT
AGTATTTTTTATGCCAGTTCTCTTGTATGATTATTCTCTACCTCAATTTA
TTCTCCATCTTTTACCAGGCGCTTTCAACACAAACACTTGGTATCAATAC
ATGGAGTATGCAGCGAAATGGAACCCCTTTTGATCGTGGTTGAACACATG
TGCCATGGTATGTATTGCTTTTACTATTATTTTTACGGTGTTTCATTCTT
TCAATTCTAGATTTTAGTCGATATTATTGCTGATTTTCCAGTCATCTAGG
ATCTTTAGACAGTCTCTCACTCGTTTTGTGGGGTCTACAGTCAGCCGACT
CGGCTATCTGAATAGAATCGCTCCTTTATTCAAAATAAACAAAGATATAA
TTTTCAGACCCAGCATCTAACCTATGTTTTTGAAAATTGGCCATGTATCT
AGATGTCTGATAAATGTAAAATAGTTTATATTTCTCTTTCTCTCATTCAA
TTAAAAGTTTCACTCTATCATTTTTCCTGTGCTTTCTAGCACAGAAACCT
ATAAACATAAAAAAATATATATTTTTAATTATAGGATCATTACACACATA
TTTACGCGAACGTAGGGAGTTGATACGCAAACAAGACTTATTAACGGATA
TGATTTTCCAAGTAGTCAGCGCTATGAAGTACCTTGAAGAGGAAAAGTTC
ATTCACAGAGATTTGGTAAAAGAATCTTTCTAAGCTATATGGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042676-exon-sc0003592-1575043694:4163..4256 | TCONS_00042676-exon-sc0003592-1575043694:4163..4256 | Clytia hemisphaerica | exon |
| TCONS_00042676-exon-sc0003592-1575043694:3950..4038 | TCONS_00042676-exon-sc0003592-1575043694:3950..4038 | Clytia hemisphaerica | exon |
| TCONS_00042676-exon-sc0003592-1575043694:3412..3572 | TCONS_00042676-exon-sc0003592-1575043694:3412..3572 | Clytia hemisphaerica | exon |
| TCONS_00042676-exon-sc0003592-1510915933:4163..4256 | TCONS_00042676-exon-sc0003592-1510915933:4163..4256 | Clytia hemisphaerica | exon |
| TCONS_00042676-exon-sc0003592-1510915933:3950..4038 | TCONS_00042676-exon-sc0003592-1510915933:3950..4038 | Clytia hemisphaerica | exon |
| TCONS_00042676-exon-sc0003592-1510915933:3412..3572 | TCONS_00042676-exon-sc0003592-1510915933:3412..3572 | Clytia hemisphaerica | exon |
| TCONS_00042676-exon-sc0003592-1491911889:4163..4256 | TCONS_00042676-exon-sc0003592-1491911889:4163..4256 | Clytia hemisphaerica | exon |
| TCONS_00042676-exon-sc0003592-1491911889:3950..4038 | TCONS_00042676-exon-sc0003592-1491911889:3950..4038 | Clytia hemisphaerica | exon |
| TCONS_00042676-exon-sc0003592-1491911889:3412..3572 | TCONS_00042676-exon-sc0003592-1491911889:3412..3572 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003592 | supercontig | sc0003592:3412..4256 - |
Blast
The following BLAST results are available for this feature:
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