TCONS_00042674 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042674
Unique NameTCONS_00042674
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4493

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042674 ID=TCONS_00042674|Name=TCONS_00042674|organism=Clytia hemisphaerica|type=transcript|length=4493bp
CCCCtaaggtacccgagagtagttagttgagatgaaatgaaaaacaatgg
GGTATTGTTTTGTGTGTTTGGATTGTGAAGTAAAGATGCGAAAGGGTAGC
TTGTAAAACAAACTCATGATTATATGGAGAACCGAAGATCAACAAGTCTC
ACCCTCCGGTGAGGCGAAAATTGACTTCACAAAAATCATTGAACAAATCA
TCCCCCAAGACCGGGAAGTTAGAAAGGAGGAAGGGAAAGGCCTTATCCGC
CAAAGAAGAGACTTTTCAGATGACCAGGAGACANTCACGAAAATCATTGA
ACAAATCATCCCCCAAGACCGGGAAGTTAGAAAGGAGGAAGGGAAAGGCC
TTATCCGCCAAAGAAGAGACTTTTCAGATGACCAGGAGACGATCTCCAAA
AGAGGAAAAACGGAATCGCCAAAACAGGATGACCCACCTGGGCTGGGGGA
GGGTGTCCAGGAGACCGAGTCTGCCCTTGAAGGGAAGATCCCCCCTGAGT
CTAATCTGGAAGTTAACTTAGTGGAACCAAATCTCGAAAACATGGCAACC
CCGGTGATCCCTGAAACTCCCTTGGAACAACAACCACTAGAGGAAATTGA
CCAGAGGGAGGAGGAGGGAGAAGTGGAACTTGACTACAATGAGGAAAGCC
CAACTCGAACACTCTCTCAAAAATACGAAAGTGAAGGGGACACAATTATC
TCTGACGAAACCTTCTCAGACGCTGACTTTGAGAAACTTCAGATAGATGA
GGGGGAAAACTCTGACAAAATTGAGCAATTCGAGGACACCCAGTCAACAC
CACCCGGTGAAGACGGTAATGTTGACGAAATCAAAGAATTCTCAAGCACT
AGTTCAAAACCCGATGCTCACTCAACACCTAGTTCCACACACAGTCCAAC
CCCATCTTTTTCGCACTTTGAACCAACACTCGACTTGAAATCCTTGGGAG
AAGAACAAACCAAAATTTTCATGAGGAAGATCCAAAATAGGAATAAAACA
ATAAAGGCTGACATAAAACGGGTTAGACAAGGAAACCCTGTAAATTATAA
GTCAAaggaaaactttaaaaattggACCATcgagaaaacaaaaattcaaa
aagacgTTGAAAAACTTAGGAGGTTGAAACCCAGCTTGTGGAGAAAGGAA
AACCATCTGGGGTCCGTCACTTTTAAACCATCCTCCGGAACAGCGGTAAA
ATCCCCTCCCAAAGTCATTCGAAGCAAAAAAGCTGAAGAACTGGCCAAGG
CATCTGTGAACACCGGGGGGAAACCAAATGCTGACAAAAGGGAAATGCTT
AACCGGGTGACCCCAAATCGGCTCCCAAACGTCCCTTTGACGAAATTTGA
ATTCAACAAGCTATGGCAAGAATTGAGGGAAAAACACAAGAATACGGAAA
CCTACCCAACACTGGTCCCCAGAGTAGTAAATGGGAAACTTGTCAAAATG
GGGTCCATCACATCCTTGATGTGTGGCGTCGTTGCACCAATATATATTCA
GAACGCTGCAAAAAATGATCTGTATCAAGTTTCCATCATTCGTCACAACT
CTTCAAAAAGCCCCAGCGGAATTAGCGGAAGCTTTGATCACGAATGCCTG
TGTGACCAAAATCCCTTACAACGACCAGAATGCGGATATCGAAGCCATAA
ACAAATCCCTCAAAGTCAGCTTAAACCGAGGTGGGCAATGTGACGATAGT
CTTTACCAATTATACACCAAATATCCAAATCTTTTCTATATTCCAaatta
aaaatgattgaaaaaaatgtttgtatctcaaaaaaattttcttttttatc
ataaCATAAACGGTACTTATGCGGGATGCCCACGGGAGAGTGGTTCAATT
TGCTGAGCTAGTGAGGTGTCAGGCagacttcatttttcttcaagaAACCC
ATCATGTTGGCACAGACAAGTGGGAAAACCGGTGGCCTAAAGAGAAATCC
TTTTGGTCAGATGGGACTATTTTCTCACGTGGATGTGCAATTTTGCTGGG
TCCCAAAATTAAccaaaaaattctttctcaagAACGAGATGCACAGGGTA
GATAcgtgtttttaaaactttcccTTCAGGGGGAATTAAACTCAATCTAG
CCTGTATATATGCACCTGATAATCCCATGGAAAGGGTGGACTTCTTCGAG
AATGTAAGATCCCCCTTAACCATCTTTTGTGGGAACGACCCCTTGATTTT
AGGGGGAGATTTTAACTTTGTGGAAGACCCCTTTCGTGACAGAGTGGGAG
GGGATGTGACCCTACCCCAGTTCACCAGGGGGGGGAAGAGTTTCAAGAGA
TTACACGTTCCTTTGACCTCCAGGATCAGTTTTTAACTGTGGGAAAGAAA
AGGAACGAGTATACCTGGAGAAAATCAAAAGGCACTACCAGGAGTAGGTT
GGATCGTTTTTACGTCAGCACCCGTGGGGCCATTCATCCTCTGGAACTTA
ACACTATTAATAAACCTCAAGATCATTCACCTATTTCTCTTAAATTCAAA
ACTACTTTTGAACATCCCTTCTAGACTCAAGCTCCTACAAGGAACTCGTC
AGTGGAGTCATACAATCTTCACTGGCCCAACATTTGGAGAATATTTCTGT
ATGGTGGGATATTCTCAAGGAGGCAATTAAGGATGAATCCATAAGGGCCt
ccaaagaaagaaaattgagaaTGTCCGACGCCAAGAAAGCACTACAGAAC
AAACTCGATGGCCTGATTTTGAAATGCGGGAAAGAGGACGTTAATGCCCA
GATAGTGGACTTACTCTCTAAGCTTAAACTACTCCAACTCGAGAACGCGC
GGGGAGCGCGGGCTAGAAGCGGCCAACAACTGGCCGAACAGTTCGAACAA
CCAAACTCCTACTTCTACGCGGTCGCGGTTGAAAAAAACGCGCGGACGGA
AAACGCCTGGATGCGCtaatgattgaaaatgaagTCACTCTGAAAGAGAA
AACTcgtcgaaaaaaaagaaaaagcacaAAAAATAGATGAGTCATTACCA
CCAGAAGCAGTTAAGCATACAAGGCAGCCAGGAGCATCAGCCTGTCTAAC
CGTTTTACCCCTGAAAGAGCATGGGTTTTCTCCGAACAAAGGAGAATTTA
GAGACGCAGTTGCACCTGAGATACGGAAAAAGTTTAAAGGGACTTCTATC
AAAATGCCCATGTACAATGTGAATCACGCACTCAACTGCAAAAAGGGAGA
TTTTGTAACAATCCGCCGCAACAATGTTAGAGATTTTGAAGCGGGACTCC
TTGCAAAAGTGCATGCTGACGTCGAAACTGAACCACAACTACAACTCATA
GCAGGAAAAACCATCAATGGCCTTGCTGGAGACAACGCTAGGCCTGATGT
CCAAGCCAGGGGAGTCTGGAGGCCAGCCCAAAATGCTTATTTTGACATCC
GTGTGAGCAATACCGACGCcgaaacacaaaaaaataacaagacAGAAACT
GTGTTAGCGAAACAAGAACTCAAAAAGAAACGCCCGTACAACAACAAGAT
CATGAGCGTCGAACAAGGAACCTTCACGCCATTAATTTTCTCCGTAACAG
GTGTGATGGAAAAGGAATGCTCGACTTTTCATAAGCATATTGCTGACAAA
ATTGCCAGAAAAACTGAACAGAGATAAACTATCTATGTAAACTATCTTTT
CTCATCCTCAGACCTGTCGTCGTGTGTGTCAGAGGAAGCAGGTTCCACAC
GAAAAAAACTGAGCATATACCTTTAGAGGACTTTGCACTTGTACATACGA
ATGCAAGattctaaattattttttcagtgTTAGATTTATTAAACGGAAAT
TTTGATACAATAACTATAGGAAGATATGGTTTTTAGGCCCAGTCAACTGA
GGCTCTGGGAAATGTATTCTAACTAGAAAAAAAAGTGATACATGACCCGA
CACTTCTGGAAAAATCGAATGAGTGAATTAAAGGGCAGAATTTCTTACCT
AATCCAACTCTGTTCAACACATTACATAAAGCTGAAAGTTTCCTCAAAAT
CTAATTCCCAATGAAGTAAATGGTGAACAATCGAAACCCAGGCACTTCAA
CAAATCGCTGAATTCATCCCATGGGCCCATGGCTAATTAAcctgagaaaa
aaatgaatcaaaaggGAAAAAAGCTGAGGAAAAACAATTTTGGAAGCACG
AAGAAGAAATGGATGACGGTCGAAAGTCTGGAAGTCTAActagaataaag
aaaaaagggaGTAACACACAAATTGAATATGACCTATACCTACCATCAAT
AGGTCACAAGAAAGTCACGGACCTAAGAGAAGCTTTAAACAAAATACATC
TACAAGGAATAGCACGAAAAAACGTATACATGTGCGTAACATCAAAAGAT
GTCGAAATACTCAAAAAAGCTGAAACCAGAACCACCAAAAAGTATACTaa
agaaaaccaaaaagaaaaagaagaaaaacaaaaacaaacctacAAATGAG
AGATTGGAAAACAAAACAACACCATCTGAAAGATTTGAGAAAT
Run BLAST on NCBI

protein sequence of TCONS_00042674-protein

>TCONS_00042674-protein ID=TCONS_00042674-protein|Name=TCONS_00042674-protein|organism=Clytia hemisphaerica|type=polypeptide|length=525bp
MIIWRTEDQQVSPSGEAKIDFTKIIEQIIPQDREVRKEEGKGLIRQRRDF
SDDQETXTKIIEQIIPQDREVRKEEGKGLIRQRRDFSDDQETISKRGKTE
SPKQDDPPGLGEGVQETESALEGKIPPESNLEVNLVEPNLENMATPVIPE
TPLEQQPLEEIDQREEEGEVELDYNEESPTRTLSQKYESEGDTIISDETF
SDADFEKLQIDEGENSDKIEQFEDTQSTPPGEDGNVDEIKEFSSTSSKPD
AHSTPSSTHSPTPSFSHFEPTLDLKSLGEEQTKIFMRKIQNRNKTIKADI
KRVRQGNPVNYKSKENFKNWTIEKTKIQKDVEKLRRLKPSLWRKENHLGS
VTFKPSSGTAVKSPPKVIRSKKAEELAKASVNTGGKPNADKREMLNRVTP
NRLPNVPLTKFEFNKLWQELREKHKNTETYPTLVPRVVNGKLVKMGSITS
LMCGVVAPIYIQNAAKNDLYQVSIIRHNSSKSPSGISGSFDHECLCDQNP
LQRPECGYRSHKQIPQSQLKPRWAM
Run BLAST on NCBI

transcript from alignment at sc0003589:1133..5625

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042674 ID=TCONS_00042674|Name=TCONS_00042674|organism=Clytia hemisphaerica|type=transcript|length=4493bp|location=Sequence derived from alignment at sc0003589:1133..5625 (Clytia hemisphaerica)
ATTTCTCAAATCTTTCAGATGGTGTTGTTTTGTTTTCCAATCTCTCATTT gtaggtttgtttttgtttttcttctttttctttttggttttctttAGTAT ACTTTTTGGTGGTTCTGGTTTCAGCTTTTTTGAGTATTTCGACATCTTTT GATGTTACGCACATGTATACGTTTTTTCGTGCTATTCCTTGTAGATGTAT TTTGTTTAAAGCTTCTCTTAGGTCCGTGACTTTCTTGTGACCTATTGATG GTAGGTATAGGTCATATTCAATTTGTGTGTTACtcccttttttctttatt ctagTTAGACTTCCAGACTTTCGACCGTCATCCATTTCTTCTTCGTGCTT CCAAAATTGTTTTTCCTCAGCTTTTTTCccttttgattcatttttttctc aggTTAATTAGCCATGGGCCCATGGGATGAATTCAGCGATTTGTTGAAGT GCCTGGGTTTCGATTGTTCACCATTTACTTCATTGGGAATTAGATTTTGA GGAAACTTTCAGCTTTATGTAATGTGTTGAACAGAGTTGGATTAGGTAAG AAATTCTGCCCTTTAATTCACTCATTCGATTTTTCCAGAAGTGTCGGGTC ATGTATCACTTTTTTTTCTAGTTAGAATACATTTCCCAGAGCCTCAGTTG ACTGGGCCTAAAAACCATATCTTCCTATAGTTATTGTATCAAAATTTCCG TTTAATAAATCTAAcactgaaaaaataatttagaatCTTGCATTCGTATG TACAAGTGCAAAGTCCTCTAAAGGTATATGCTCAGTTTTTTTCGTGTGGA ACCTGCTTCCTCTGACACACACGACGACAGGTCTGAGGATGAGAAAAGAT AGTTTACATAGATAGTTTATCTCTGTTCAGTTTTTCTGGCAATTTTGTCA GCAATATGCTTATGAAAAGTCGAGCATTCCTTTTCCATCACACCTGTTAC GGAGAAAATTAATGGCGTGAAGGTTCCTTGTTCGACGCTCATGATCTTGT TGTTGTACGGGCGTTTCTTTTTGAGTTCTTGTTTCGCTAACACAGTTTCT gtcttgttatttttttgtgtttcgGCGTCGGTATTGCTCACACGGATGTC AAAATAAGCATTTTGGGCTGGCCTCCAGACTCCCCTGGCTTGGACATCAG GCCTAGCGTTGTCTCCAGCAAGGCCATTGATGGTTTTTCCTGCTATGAGT TGTAGTTGTGGTTCAGTTTCGACGTCAGCATGCACTTTTGCAAGGAGTCC CGCTTCAAAATCTCTAACATTGTTGCGGCGGATTGTTACAAAATCTCCCT TTTTGCAGTTGAGTGCGTGATTCACATTGTACATGGGCATTTTGATAGAA GTCCCTTTAAACTTTTTCCGTATCTCAGGTGCAACTGCGTCTCTAAATTC TCCTTTGTTCGGAGAAAACCCATGCTCTTTCAGGGGTAAAACGGTTAGAC AGGCTGATGCTCCTGGCTGCCTTGTATGCTTAACTGCTTCTGGTGGTAAT GACTCATCTATTTTTtgtgctttttcttttttttcgacgAGTTTTCTCTT TCAGAGTGActtcattttcaatcattaGCGCATCCAGGCGTTTTCCGTCC GCGCGTTTTTTTCAACCGCGACCGCGTAGAAGTAGGAGTTTGGTTGTTCG AACTGTTCGGCCAGTTGTTGGCCGCTTCTAGCCCGCGCTCCCCGCGCGTT CTCGAGTTGGAGTAGTTTAAGCTTAGAGAGTAAGTCCACTATCTGGGCAT TAACGTCCTCTTTCCCGCATTTCAAAATCAGGCCATCGAGTTTGTTCTGT AGTGCTTTCTTGGCGTCGGACAttctcaattttctttctttggaGGCCCT TATGGATTCATCCTTAATTGCCTCCTTGAGAATATCCCACCATACAGAAA TATTCTCCAAATGTTGGGCCAGTGAAGATTGTATGACTCCACTGACGAGT TCCTTGTAGGAGCTTGAGTCTAGAAGGGATGTTCAAAAGTAGTTTTGAAT TTAAGAGAAATAGGTGAATGATCTTGAGGTTTATTAATAGTGTTAAGTTC CAGAGGATGAATGGCCCCACGGGTGCTGACGTAAAAACGATCCAACCTAC TCCTGGTAGTGCCTTTTGATTTTCTCCAGGTATACTCGTTCCTTTTCTTT CCCACAGTTAAAAACTGATCCTGGAGGTCAAAGGAACGTGTAATCTCTTG AAACTCTTCCCCCCCCTGGTGAACTGGGGTAGGGTCACATCCCCTCCCAC TCTGTCACGAAAGGGGTCTTCCACAAAGTTAAAATCTCCCCCTAAAATCA AGGGGTCGTTCCCACAAAAGATGGTTAAGGGGGATCTTACATTCTCGAAG AAGTCCACCCTTTCCATGGGATTATCAGGTGCATATATACAGGCTAGATT GAGTTTAATTCCCCCTGAAgggaaagttttaaaaacacgTATCTACCCTG TGCATCTCGTTcttgagaaagaattttttggTTAATTTTGGGACCCAGCA AAATTGCACATCCACGTGAGAAAATAGTCCCATCTGACCAAAAGGATTTC TCTTTAGGCCACCGGTTTTCCCACTTGTCTGTGCCAACATGATGGGTTtc ttgaagaaaaatgaagtctGCCTGACACCTCACTAGCTCAGCAAATTGAA CCACTCTCCCGTGGGCATCCCGCATAAGTACCGTTTATGttatgataaaa aagaaaatttttttgagatacaaacatttttttcaatcatttttaattTG GAATATAGAAAAGATTTGGATATTTGGTGTATAATTGGTAAAGACTATCG TCACATTGCCCACCTCGGTTTAAGCTGACTTTGAGGGATTTGTTTATGGC TTCGATATCCGCATTCTGGTCGTTGTAAGGGATTTTGGTCACACAGGCAT TCGTGATCAAAGCTTCCGCTAATTCCGCTGGGGCTTTTTGAAGAGTTGTG ACGAATGATGGAAACTTGATACAGATCATTTTTTGCAGCGTTCTGAATAT ATATTGGTGCAACGACGCCACACATCAAGGATGTGATGGACCCCATTTTG ACAAGTTTCCCATTTACTACTCTGGGGACCAGTGTTGGGTAGGTTTCCGT ATTCTTGTGTTTTTCCCTCAATTCTTGCCATAGCTTGTTGAATTCAAATT TCGTCAAAGGGACGTTTGGGAGCCGATTTGGGGTCACCCGGTTAAGCATT TCCCTTTTGTCAGCATTTGGTTTCCCCCCGGTGTTCACAGATGCCTTGGC CAGTTCTTCAGCTTTTTTGCTTCGAATGACTTTGGGAGGGGATTTTACCG CTGTTCCGGAGGATGGTTTAAAAGTGACGGACCCCAGATGGTTTTCCTTT CTCCACAAGCTGGGTTTCAACCTCCTAAGTTTTTCAAcgtctttttgaat ttttgttttctcgATGGTccaatttttaaagttttcctTTGACTTATAAT TTACAGGGTTTCCTTGTCTAACCCGTTTTATGTCAGCCTTTATTGTTTTA TTCCTATTTTGGATCTTCCTCATGAAAATTTTGGTTTGTTCTTCTCCCAA GGATTTCAAGTCGAGTGTTGGTTCAAAGTGCGAAAAAGATGGGGTTGGAC TGTGTGTGGAACTAGGTGTTGAGTGAGCATCGGGTTTTGAACTAGTGCTT GAGAATTCTTTGATTTCGTCAACATTACCGTCTTCACCGGGTGGTGTTGA CTGGGTGTCCTCGAATTGCTCAATTTTGTCAGAGTTTTCCCCCTCATCTA TCTGAAGTTTCTCAAAGTCAGCGTCTGAGAAGGTTTCGTCAGAGATAATT GTGTCCCCTTCACTTTCGTATTTTTGAGAGAGTGTTCGAGTTGGGCTTTC CTCATTGTAGTCAAGTTCCACTTCTCCCTCCTCCTCCCTCTGGTCAATTT CCTCTAGTGGTTGTTGTTCCAAGGGAGTTTCAGGGATCACCGGGGTTGCC ATGTTTTCGAGATTTGGTTCCACTAAGTTAACTTCCAGATTAGACTCAGG GGGGATCTTCCCTTCAAGGGCAGACTCGGTCTCCTGGACACCCTCCCCCA GCCCAGGTGGGTCATCCTGTTTTGGCGATTCCGTTTTTCCTCTTTTGGAG ATCGTCTCCTGGTCATCTGAAAAGTCTCTTCTTTGGCGGATAAGGCCTTT CCCTTCCTCCTTTCTAACTTCCCGGTCTTGGGGGATGATTTGTTCAATGA TTTTCGTGANTGTCTCCTGGTCATCTGAAAAGTCTCTTCTTTGGCGGATA AGGCCTTTCCCTTCCTCCTTTCTAACTTCCCGGTCTTGGGGGATGATTTG TTCAATGATTTTTGTGAAGTCAATTTTCGCCTCACCGGAGGGTGAGACTT GTTGATCTTCGGTTCTCCATATAATCATGAGTTTGTTTTACAAGCTACCC TTTCGCATCTTTACTTCACAATCCAAACACACAAAACAATACCccattgt ttttcatttcatctcaactaactactctcgggtaccttaGGGG

Coding sequence (CDS) from alignment at sc0003589:1133..5625

>TCONS_00042674 ID=TCONS_00042674|Name=TCONS_00042674|organism=Clytia hemisphaerica|type=CDS|length=1578bp|location=Sequence derived from alignment at sc0003589:1133..5625 (Clytia hemisphaerica)
TCACATTGCCCACCTCGGTTTAAGCTGACTTTGAGGGATTTGTTTATGGC
TTCGATATCCGCATTCTGGTCGTTGTAAGGGATTTTGGTCACACAGGCAT
TCGTGATCAAAGCTTCCGCTAATTCCGCTGGGGCTTTTTGAAGAGTTGTG
ACGAATGATGGAAACTTGATACAGATCATTTTTTGCAGCGTTCTGAATAT
ATATTGGTGCAACGACGCCACACATCAAGGATGTGATGGACCCCATTTTG
ACAAGTTTCCCATTTACTACTCTGGGGACCAGTGTTGGGTAGGTTTCCGT
ATTCTTGTGTTTTTCCCTCAATTCTTGCCATAGCTTGTTGAATTCAAATT
TCGTCAAAGGGACGTTTGGGAGCCGATTTGGGGTCACCCGGTTAAGCATT
TCCCTTTTGTCAGCATTTGGTTTCCCCCCGGTGTTCACAGATGCCTTGGC
CAGTTCTTCAGCTTTTTTGCTTCGAATGACTTTGGGAGGGGATTTTACCG
CTGTTCCGGAGGATGGTTTAAAAGTGACGGACCCCAGATGGTTTTCCTTT
CTCCACAAGCTGGGTTTCAACCTCCTAAGTTTTTCAAcgtctttttgaat
ttttgttttctcgATGGTccaatttttaaagttttcctTTGACTTATAAT
TTACAGGGTTTCCTTGTCTAACCCGTTTTATGTCAGCCTTTATTGTTTTA
TTCCTATTTTGGATCTTCCTCATGAAAATTTTGGTTTGTTCTTCTCCCAA
GGATTTCAAGTCGAGTGTTGGTTCAAAGTGCGAAAAAGATGGGGTTGGAC
TGTGTGTGGAACTAGGTGTTGAGTGAGCATCGGGTTTTGAACTAGTGCTT
GAGAATTCTTTGATTTCGTCAACATTACCGTCTTCACCGGGTGGTGTTGA
CTGGGTGTCCTCGAATTGCTCAATTTTGTCAGAGTTTTCCCCCTCATCTA
TCTGAAGTTTCTCAAAGTCAGCGTCTGAGAAGGTTTCGTCAGAGATAATT
GTGTCCCCTTCACTTTCGTATTTTTGAGAGAGTGTTCGAGTTGGGCTTTC
CTCATTGTAGTCAAGTTCCACTTCTCCCTCCTCCTCCCTCTGGTCAATTT
CCTCTAGTGGTTGTTGTTCCAAGGGAGTTTCAGGGATCACCGGGGTTGCC
ATGTTTTCGAGATTTGGTTCCACTAAGTTAACTTCCAGATTAGACTCAGG
GGGGATCTTCCCTTCAAGGGCAGACTCGGTCTCCTGGACACCCTCCCCCA
GCCCAGGTGGGTCATCCTGTTTTGGCGATTCCGTTTTTCCTCTTTTGGAG
ATCGTCTCCTGGTCATCTGAAAAGTCTCTTCTTTGGCGGATAAGGCCTTT
CCCTTCCTCCTTTCTAACTTCCCGGTCTTGGGGGATGATTTGTTCAATGA
TTTTCGTGANTGTCTCCTGGTCATCTGAAAAGTCTCTTCTTTGGCGGATA
AGGCCTTTCCCTTCCTCCTTTCTAACTTCCCGGTCTTGGGGGATGATTTG
TTCAATGATTTTTGTGAAGTCAATTTTCGCCTCACCGGAGGGTGAGACTT
GTTGATCTTCGGTTCTCCATATAATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026487XLOC_026487Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042674-proteinTCONS_00042674-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042674-exon-sc0003589-1491911889:1133..5625TCONS_00042674-exon-sc0003589-1491911889:1133..5625Clytia hemisphaericaexon
TCONS_00042674-exon-sc0003589-1510915933:1133..5625TCONS_00042674-exon-sc0003589-1510915933:1133..5625Clytia hemisphaericaexon
TCONS_00042674-exon-sc0003589-1575043694:1133..5625TCONS_00042674-exon-sc0003589-1575043694:1133..5625Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003589supercontigsc0003589:1133..5625 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.535671 0.293692 0.299006 0.431711 0.31868 0.342628 0.594575 1.01102 0.410526 0.750387 0.31099 0.452611 0.431172 0.533896 0.744173 0.772857 1.01377 0.858609 0.550129 0.651685 0.742017 0.535945 0.699456 0.647977 0.805406 0.900312 1.08885 1.27604 1.4455 1.45227
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042674 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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