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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042666 ID=TCONS_00042666|Name=TCONS_00042666|organism=Clytia hemisphaerica|type=transcript|length=1279bp
TAGTCAGTTAAAGGTACTGGCGGGCGCTTATTGAAAACGTCTATAGTTGT
GAAAATGGGCCTGAAAGCCTCCTGCGACTCCAAATAGAAGTAGAAATAGA
TACTATCGAAGTGGGATCGCCTGGAAGACTTTTGCTTGTGGATGCACAGC
TAACACTGGTGACATAATCCAACATAACTATAGCACTGTGCTGTGAGCTT
TAAAATCTGTAACAGAGTAGCTATATATTGTAGAGTGCTACAGGATTTGG
ATAATTTGATTTGTCATTATTGACAATTACAGTATTTTGGATTATGTTGC
CTCACAGTTGTTTTAATAGGACTGCACAAACCAAATCTGCTGTCAATAAA
TgtctgaaaatttctttttataccTATTCAGGACTCCCAATTCAAGATGT
TGACGTGTATGTGTACGTGTATGGGAACATTTTGAACAAGGAACAAGAAC
AAGTTGAAATTTTAGAGAATTGTATGGCTTGATGGTTTCTGAACGTTTTC
AATCAAAGTATCAAAGATTCTTACTCAGAGCTGAATTATGACTGTTACGT
AAAAACTTTTACCCATGCCACGTTGGATATGTAGTCGTAATGAAGTTGTA
CATTGTTCGATAAACATATGTATGGTTGCCAAAATAATTGGTCTTGATTT
ACTGTAACTAATACAGAACTTGACTGTTTATGTCATTCCTTGTTGTTTTA
AATCTTATGACACAATAAGAATGGAAAGAGTATAGTATATATTAGTAGGC
TATGATTACGAAAAAATTTTTGGAGACTACCttttaaatgaagaattttg
ACAAGTATTTAACTTACGGAATTACTGGAAAAATTAAGAGTAGTCAGGAA
TAGCAGGAATCTTAATTTAGCAATCAAaggattttgaccaaaaatagtga
tTCAACAAGCCTGTTTATAAGTCCTGACATAGCACAAGTCCAGGGAATAT
AATGAAATAAATCAACTTTGGCAGAGATTTTAACTAAATCCCTAATAAAT
TTCATTTTTTCAACAAAATTCCTTCCTTTAAGATACTTTTGTAATTTTGA
GGATATATCTCAAGTATTTGGTCAAATTTCATCCAGAAGTTTCCTTCTCT
GGTTAATTTCTAATGATATAACAGGGTTAATTGTCTTACTGTGTCTTATG
TTTTATGTTTTCAGGAGTTTGAAAAAGTTCTTAGGGTGAAATTCTGTCAG
ATAATTTAGATCCTGTGAAATTTATTGGAATTATGTTGAGGATaatgttt
ttatataattttgttaatttaaGAATTCC Run BLAST on NCBI transcript from alignment at sc0003583:1955..3233 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042666 ID=TCONS_00042666|Name=TCONS_00042666|organism=Clytia hemisphaerica|type=transcript|length=1279bp|location=Sequence derived from alignment at sc0003583:1955..3233 (Clytia hemisphaerica)
GGAATTCttaaattaacaaaattatataaaaacattATCCTCAACATAAT
TCCAATAAATTTCACAGGATCTAAATTATCTGACAGAATTTCACCCTAAG
AACTTTTTCAAACTCCTGAAAACATAAAACATAAGACACAGTAAGACAAT
TAACCCTGTTATATCATTAGAAATTAACCAGAGAAGGAAACTTCTGGATG
AAATTTGACCAAATACTTGAGATATATCCTCAAAATTACAAAAGTATCTT
AAAGGAAGGAATTTTGTTGAAAAAATGAAATTTATTAGGGATTTAGTTAA
AATCTCTGCCAAAGTTGATTTATTTCATTATATTCCCTGGACTTGTGCTA
TGTCAGGACTTATAAACAGGCTTGTTGAatcactatttttggtcaaaatc
ctTTGATTGCTAAATTAAGATTCCTGCTATTCCTGACTACTCTTAATTTT
TCCAGTAATTCCGTAAGTTAAATACTTGTcaaaattcttcatttaaaaGG
TAGTCTCCAAAAATTTTTTCGTAATCATAGCCTACTAATATATACTATAC
TCTTTCCATTCTTATTGTGTCATAAGATTTAAAACAACAAGGAATGACAT
AAACAGTCAAGTTCTGTATTAGTTACAGTAAATCAAGACCAATTATTTTG
GCAACCATACATATGTTTATCGAACAATGTACAACTTCATTACGACTACA
TATCCAACGTGGCATGGGTAAAAGTTTTTACGTAACAGTCATAATTCAGC
TCTGAGTAAGAATCTTTGATACTTTGATTGAAAACGTTCAGAAACCATCA
AGCCATACAATTCTCTAAAATTTCAACTTGTTCTTGTTCCTTGTTCAAAA
TGTTCCCATACACGTACACATACACGTCAACATCTTGAATTGGGAGTCCT
GAATAggtataaaaagaaattttcagacATTTATTGACAGCAGATTTGGT
TTGTGCAGTCCTATTAAAACAACTGTGAGGCAACATAATCCAAAATACTG
TAATTGTCAATAATGACAAATCAAATTATCCAAATCCTGTAGCACTCTAC
AATATATAGCTACTCTGTTACAGATTTTAAAGCTCACAGCACAGTGCTAT
AGTTATGTTGGATTATGTCACCAGTGTTAGCTGTGCATCCACAAGCAAAA
GTCTTCCAGGCGATCCCACTTCGATAGTATCTATTTCTACTTCTATTTGG
AGTCGCAGGAGGCTTTCAGGCCCATTTTCACAACTATAGACGTTTTCAAT
AAGCGCCCGCCAGTACCTTTAACTGACTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042666-exon-sc0003583-1491911889:1955..3233 | TCONS_00042666-exon-sc0003583-1491911889:1955..3233 | Clytia hemisphaerica | exon |
| TCONS_00042666-exon-sc0003583-1510915933:1955..3233 | TCONS_00042666-exon-sc0003583-1510915933:1955..3233 | Clytia hemisphaerica | exon |
| TCONS_00042666-exon-sc0003583-1575043694:1955..3233 | TCONS_00042666-exon-sc0003583-1575043694:1955..3233 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003583 | supercontig | sc0003583:1955..3233 . |
Blast
The following BLAST results are available for this feature:
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