TCONS_00042651 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042651
Unique NameTCONS_00042651
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042651 ID=TCONS_00042651|Name=TCONS_00042651|organism=Clytia hemisphaerica|type=transcript|length=196bp
gaaggtactggctagcAATTAACCAATGGAATCGCTTCGTTTTAGTTTCT
GTACGGGAGACGTAACGTTTTCACAATTCGTTTTATTTTTTAGGGCGTTG
ATTATTCAGCTTTAATATGGGGTGTTGGAAATAACAGTTTGAAATTACCA
GTGCCTGTGACTTGTCCAGAAGGCTTCAAATTACTCCTCAATCTAT
Run BLAST on NCBI

transcript from alignment at sc0003572:265..460

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042651 ID=TCONS_00042651|Name=TCONS_00042651|organism=Clytia hemisphaerica|type=transcript|length=196bp|location=Sequence derived from alignment at sc0003572:265..460 (Clytia hemisphaerica)
ATAGATTGAGGAGTAATTTGAAGCCTTCTGGACAAGTCACAGGCACTGGT
AATTTCAAACTGTTATTTCCAACACCCCATATTAAAGCTGAATAATCAAC
GCCCTAAAAAATAAAACGAATTGTGAAAACGTTACGTCTCCCGTACAGAA
ACTAAAACGAAGCGATTCCATTGGTTAATTgctagccagtaccttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026465XLOC_026465Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042651-exon-sc0003572-1491911889:265..460TCONS_00042651-exon-sc0003572-1491911889:265..460Clytia hemisphaericaexon
TCONS_00042651-exon-sc0003572-1510915933:265..460TCONS_00042651-exon-sc0003572-1510915933:265..460Clytia hemisphaericaexon
TCONS_00042651-exon-sc0003572-1575043694:265..460TCONS_00042651-exon-sc0003572-1575043694:265..460Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003572supercontigsc0003572:265..460 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042651 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top