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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042644 ID=TCONS_00042644|Name=TCONS_00042644|organism=Clytia hemisphaerica|type=transcript|length=1329bp
CCCCCCCTTTAAACTGTAAGTACTAAAAGGTTCTAGCCCTTAAACTGTAA
GTACTAAAAAGTTCTAGCCCTCAAACTGTAAGTACTAAAAAGTTCTAGCC
CTCAAACTGTAAGTACTAAAAGTTCTAGCCCTTAGATTGTAAATACTAAA
AGGTCCTATCctagaaataaaaaacttaAGCCTTACAACAAGAGCCGGAG
CTGTGATATGTTGTTTAACCCCAAAGAGTGCAACGAGAGCCGGAAGCCGT
GACGCTGTTCTAAGAGGagtaatcaaagaaaaaagataaaaaaaaataga
aaccttAGCCTACTAAGGAGAGCCGGAGCTTCCTGTGTGACGTTGCTGAA
aggagtaaaagaaaaaagaacaaaagccTACAACAAGAGCCGGAGCTGTG
ATATGTTGTTTAACCCCAAAGAGTGCAACGAGAGCCGGAAGCCGTGACGC
TGTTCTAAGAGgagtaaacaaagaaaaaagataaaaaaaaaaaagaaacc
taGCCTATAACGAGAGCCTGAGCCTCCAGTGTGACGttgttaaaaaaaag
aaaccttAGCCTATGTGGAGAGCCAGAGCCTCCCGTGTGACGTTGTTGAA
AATAGAAACCTTAGCTTATAACGAGAGCAGAGCGATGAGAAACGAGgtac
aaacaataaaaaaaaaaaggaaggaaaaaaaagaaaacgacccaaaaaag
aaaaacaataaaagaaaaacaaaacgaGCAACCTAACAAACACCTATTGA
TCGAACTCAAGATGCATCCCAAACGACCTAGTCCCTGGACTAAAAAACCT
GTAGCGTGGAAAAACCAGGTAAAACCGCTGGGACTAGGATTGATCGAAAT
GACTGGCGCGCGCGTCCTCTTCCCGTCGTCGGTGATGGTTGATCTGAAaa
tagaagagaaaaaaaaacagcgaaAGGAAATAAGTACAAGTTAAAGGCGC
ATAGGGATAAATAAGGGTGTCAGGGAGGGTGGGAAGCAAAAGTATTTGTG
TTGAATGCATGAGAGGATGAGGTGAACTGAATGACTGAACTCAAACGCTA
CAAGTCGGAGTCCGTGGGACTGGGACGAGTAGGAGTGGGCGTGCAGTTTA
AGCCCGCCATATGATGCCGGGCGTTAGACTTGCTGATTGCGGAATTAACA
TGAGCTAAAATTTAGCTCTAATTGATTCCTTATCAGTGTGACTGTTGAGT
GATGAGTAGCTTAAACCTAGCCTAGTGGAGAATCCAAAAATGCGTTTTTG
ATGATAGTCGAAATACCCGAAAATAGTGATAAGATACCCTAAACATAAAC
AAGGGGAAACAATGAAAAGGAAACAAATG Run BLAST on NCBI transcript from alignment at sc0003567:9567..10895 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042644 ID=TCONS_00042644|Name=TCONS_00042644|organism=Clytia hemisphaerica|type=transcript|length=1329bp|location=Sequence derived from alignment at sc0003567:9567..10895 (Clytia hemisphaerica)
CATTTGTTTCCTTTTCATTGTTTCCCCTTGTTTATGTTTAGGGTATCTTA
TCACTATTTTCGGGTATTTCGACTATCATCAAAAACGCATTTTTGGATTC
TCCACTAGGCTAGGTTTAAGCTACTCATCACTCAACAGTCACACTGATAA
GGAATCAATTAGAGCTAAATTTTAGCTCATGTTAATTCCGCAATCAGCAA
GTCTAACGCCCGGCATCATATGGCGGGCTTAAACTGCACGCCCACTCCTA
CTCGTCCCAGTCCCACGGACTCCGACTTGTAGCGTTTGAGTTCAGTCATT
CAGTTCACCTCATCCTCTCATGCATTCAACACAAATACTTTTGCTTCCCA
CCCTCCCTGACACCCTTATTTATCCCTATGCGCCTTTAACTTGTACTTAT
TTCCTttcgctgtttttttttctcttctattTTCAGATCAACCATCACCG
ACGACGGGAAGAGGACGCGCGCGCCAGTCATTTCGATCAATCCTAGTCCC
AGCGGTTTTACCTGGTTTTTCCACGCTACAGGTTTTTTAGTCCAGGGACT
AGGTCGTTTGGGATGCATCTTGAGTTCGATCAATAGGTGTTTGTTAGGTT
GCtcgttttgtttttcttttattgtttttcttttttgggtcgttttcttt
tttttccttcctttttttttttattgtttgtacCTCGTTTCTCATCGCTC
TGCTCTCGTTATAAGCTAAGGTTTCTATTTTCAACAACGTCACACGGGAG
GCTCTGGCTCTCCACATAGGCTaaggtttcttttttttaacaaCGTCACA
CTGGAGGCTCAGGCTCTCGTTATAGGCtaggtttcttttttttttttatc
ttttttctttgtttactcCTCTTAGAACAGCGTCACGGCTTCCGGCTCTC
GTTGCACTCTTTGGGGTTAAACAACATATCACAGCTCCGGCTCTTGTTGT
AggcttttgttcttttttcttttactcctTTCAGCAACGTCACACAGGAA
GCTCCGGCTCTCCTTAGTAGGCTaaggtttctatttttttttatcttttt
tctttgattactCCTCTTAGAACAGCGTCACGGCTTCCGGCTCTCGTTGC
ACTCTTTGGGGTTAAACAACATATCACAGCTCCGGCTCTTGTTGTAAGGC
TtaagttttttatttctagGATAGGACCTTTTAGTATTTACAATCTAAGG
GCTAGAACTTTTAGTACTTACAGTTTGAGGGCTAGAACTTTTTAGTACTT
ACAGTTTGAGGGCTAGAACTTTTTAGTACTTACAGTTTAAGGGCTAGAAC
CTTTTAGTACTTACAGTTTAAAGGGGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042644-exon-sc0003567-1491911889:9567..10895 | TCONS_00042644-exon-sc0003567-1491911889:9567..10895 | Clytia hemisphaerica | exon |
| TCONS_00042644-exon-sc0003567-1510915933:9567..10895 | TCONS_00042644-exon-sc0003567-1510915933:9567..10895 | Clytia hemisphaerica | exon |
| TCONS_00042644-exon-sc0003567-1575043694:9567..10895 | TCONS_00042644-exon-sc0003567-1575043694:9567..10895 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003567 | supercontig | sc0003567:9567..10895 . |
Blast
The following BLAST results are available for this feature:
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