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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042624 ID=TCONS_00042624|Name=TCONS_00042624|organism=Clytia hemisphaerica|type=transcript|length=571bp
GGGAACGTCATCATCCATTATCTCTTTTCTTAGAAGAAAAAGATATCTCA
GAAATTCAACTCCGTATGTTTTAGGTGCAGATCCTTTGGAGAGCGATGTT
ACGATGAACAGCCAATCACCGAGCTCAGGAAAGAAGAACTTTGAAGACCG
ATGGAATTCTTCTACAACTCGCCACAGATCACTGTTCTCTTCGATTGCAT
TCACCGACGCCAATAAAGTGTTCAAAGTTTCAAATTGAGGAAAAGAATCT
CCGACAGGCTGCTCAATTGGCGTCACATTAATCTGTTTAAATGTAATTCC
GATCTTTGTGGCATCGGCGGCCAGGTACTTTGGATCTGATCCACAACTCG
GACATTTTTGAACAAAGTCCAGATCCATTGCTGAAGCCACTTGATCAGAG
TGTTCCTGGACATAAATTCACATGGAGACTGGTAGTCTGTGTACCTATTT
TTGACAACCTTGACAAACCctgaaaatgtttgtttgtttgctGGTCATTA
CGCTGTCCACGAACTCCCAGCCTATTTCGTACCCGCAGGCAACTGTTGTG
CTAGATCGAAACAAACTGTCT Run BLAST on NCBI transcript from alignment at sc0003545:7583..8459+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042624 ID=TCONS_00042624|Name=TCONS_00042624|organism=Clytia hemisphaerica|type=transcript|length=877bp|location=Sequence derived from alignment at sc0003545:7583..8459+ (Clytia hemisphaerica)
GGGAACGTCATCATCCATTATCTCTTTTCTTAGAAGAAAAAGATATCTCA
GAAATTCAACTCCGTATGTTTTAGGTGCAGATCCTTTGGAGAGCGATGTT
ACGATGAACAGCCAATCACCGAGCTCAGGAAAGAAGAACTTTGAAGACCG
ATGGAATTCTTCTACAACTCGCCACAGATCACTGTTCTCTTCGATTGCAT
TCACCGACGCCAATAAAGTGTTCAAAGTTTCAAATTGAGGTAGGTATCTT
TTTGGAATTAGATTAATTAAACTTGTATCTTTGGTTAATATCACTATTAA
TTTACTCAATGATGTTCTTTCGAGAGTTGAGATATCACACTCAAAGAGTT
TTTCTGTCACTAAACGCACCACAGGGATTTCTGATTTCATCAGTGTTTTT
TTCGCTACTTCTAAATCTTCTTTACTGGCCTTGACTTTGCCACAAAAATG
TcttgaaattaaatttagagCCTCGTTGACGACTATTCTTGATTTACTGT
TGCGGTTGTTAATGAAGGTTCGGTCATATCTCCTTCTTTTTGTAGGAAAA
GAATCTCCGACAGGCTGCTCAATTGGCGTCACATTAATCTGTTTAAATGT
AATTCCGATCTTTGTGGCATCGGCGGCCAGGTACTTTGGATCTGATCCAC
AACTCGGACATTTTTGAACAAAGTCCAGATCCATTGCTGAAGCCACTTGA
TCAGAGTGTTCCTGGACATAAATTCACATGGAGACTGGTAGTCTGTGTAC
CTATTTTTGACAACCTTGACAAACCctgaaaatgtttgtttgtttgctGG
TCATTACGCTGTCCACGAACTCCCAGCCTATTTCGTACCCGCAGGCAACT
GTTGTGCTAGATCGAAACAAACTGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042624-exon-sc0003545-1491911889:7583..7821 | TCONS_00042624-exon-sc0003545-1491911889:7583..7821 | Clytia hemisphaerica | exon |
| TCONS_00042624-exon-sc0003545-1510915933:7583..7821 | TCONS_00042624-exon-sc0003545-1510915933:7583..7821 | Clytia hemisphaerica | exon |
| TCONS_00042624-exon-sc0003545-1575043694:7583..7821 | TCONS_00042624-exon-sc0003545-1575043694:7583..7821 | Clytia hemisphaerica | exon |
| TCONS_00042624-exon-sc0003545-1491911889:8128..8459 | TCONS_00042624-exon-sc0003545-1491911889:8128..8459 | Clytia hemisphaerica | exon |
| TCONS_00042624-exon-sc0003545-1510915933:8128..8459 | TCONS_00042624-exon-sc0003545-1510915933:8128..8459 | Clytia hemisphaerica | exon |
| TCONS_00042624-exon-sc0003545-1575043694:8128..8459 | TCONS_00042624-exon-sc0003545-1575043694:8128..8459 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003545 | supercontig | sc0003545:7583..8459 + |
Blast
The following BLAST results are available for this feature:
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