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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042620 ID=TCONS_00042620|Name=TCONS_00042620|organism=Clytia hemisphaerica|type=transcript|length=501bp
catttttcgatattttattaGCGCTTTTCGTGACGATTACTCTCATATAA
ATCTTATCACCACCAGGATTGGCGAAGTTTGTGAAGTTGAAGCACACGAA
GAATTTACTTTTTCAATCATCTGCGGTGGATCTCAAGTTATCTGAAATTG
GAATCGTCTAAAACACGATGTGTAATGAATTGTAAGGAACGATAATTGTT
GATTTTAAAGTCGTTAAAAGTGCGAAGTAATTATCTTGGGAATAAACGAA
ctgaaaatcaattaaaacaatgtaacaaaaaagTTACAGAATTATGTCAA
TTATGAACGACAGtcattttcattttttatgggaaTACGATTGCAATATC
ATTTATCCAGATGACACGTGTATTTTCCACATTTCCACTGTCGTAATATC
ATAATGATACACATTCATTGGCGAAGGCAAGAATCTGGAAACCTTCCGGA
GAATACCTGTGTCAGAGATCCGGTGGAGCCCTGCAAAACCATCCCTATTG
T Run BLAST on NCBI transcript from alignment at sc0003543:95..1121- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042620 ID=TCONS_00042620|Name=TCONS_00042620|organism=Clytia hemisphaerica|type=transcript|length=1027bp|location=Sequence derived from alignment at sc0003543:95..1121- (Clytia hemisphaerica)
CATTTTTCGATATTTTATTAGCGCTTTTCGTGACGATTACTCTCATATAA
ATCTTATCACCACCAGGATTGGCGAAGTTTGTGAAGTTGAAGCACACGAA
GAATTTACTTTTTCAATCATCTGCGGTGGATCTCAAGTTATCTGAAATTG
GAATCGTCTAAAACACGATGTGTAATGAATTGTAAGGAACGATAATTGTT
GATTTTAAAGTCGTTAAAAGTGCGAAGTAATTATCTTGGGAATAAACGAA
CTGAAAATCAATTAAAACAATGTAACAAAAAAGTTACAGAATTATGTCAA
TTATGAACGACAGGTGAGACTTTTATTTATGGCTTTTATTCGCCAATACG
ATGACATGGTTTTCGGCTAATTTTACGAAAAGAAACACACCCCTGTCTCA
CATGTCCCTTATATCTGTTAAAGAGTTTTTATGAATACGGGCGAAGAGTG
GGGAAACGGTACATCATATTATCTCAGTGACGCTTATTACCACCGGGACA
AGGGGTGAAGCTTTCCACCTCTTAGCGAGTTTAGTTCGATTTTCCTTTGA
GTTCAAGCTGCAAAAATATCTTGCTTCGATGTTTTTCCATTCGATGTAAT
TTTTACTTAAAAAGGACGTGAGAATTTCGGTACGGTTTTCCTTTTAACTA
CCTTAAAACGGGCATTGTGAGATAACGATGTTTCAGAACCCTGATCTTGC
CACTCCTTGCTCATTACTAGGTCTCCAGTGGTCTAGATTGGATGAATCAC
AACAATTCTTNGGTCTCCAGTGGTCTAGATTGGATGAATCACAACAATTC
TTCTCTCGTGCTATTTTCTTTTTTTCTTTTTCATTTCAGTCATTTTCATT
TTTTATGGGAATACGATTGCAATATCATTTATCCAGATGACACGTGTATT
TTCCACATTTCCACTGTCGTAATATCATAATGATACACATTCATTGGCGA
AGGCAAGAATCTGGAAACCTTCCGGAGAATACCTGTGTCAGAGATCCGGT
GGAGCCCTGCAAAACCATCCCTATTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042620-exon-sc0003543-1575043694:809..1121 | TCONS_00042620-exon-sc0003543-1575043694:809..1121 | Clytia hemisphaerica | exon |
| TCONS_00042620-exon-sc0003543-1575043694:95..282 | TCONS_00042620-exon-sc0003543-1575043694:95..282 | Clytia hemisphaerica | exon |
| TCONS_00042620-exon-sc0003543-1510915933:809..1121 | TCONS_00042620-exon-sc0003543-1510915933:809..1121 | Clytia hemisphaerica | exon |
| TCONS_00042620-exon-sc0003543-1510915933:95..282 | TCONS_00042620-exon-sc0003543-1510915933:95..282 | Clytia hemisphaerica | exon |
| TCONS_00042620-exon-sc0003543-1491911889:809..1121 | TCONS_00042620-exon-sc0003543-1491911889:809..1121 | Clytia hemisphaerica | exon |
| TCONS_00042620-exon-sc0003543-1491911889:95..282 | TCONS_00042620-exon-sc0003543-1491911889:95..282 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003543 | supercontig | sc0003543:95..1121 - |
Blast
The following BLAST results are available for this feature:
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