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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042602 ID=TCONS_00042602|Name=TCONS_00042602|organism=Clytia hemisphaerica|type=transcript|length=964bp
cagcacctgaccccgagaatgtagtaaaccccgagaatgtaggtttctca
ttttttagcattgtagccctaacgatagttcaacttcataaaaagttgtt
tcagagcatactgttacatattactgattatttctagacataaaatttta
acttgaattgattttttcagtACGGTGGTTTGTTAGGGCCATGTACAAAA
CAGATATAATTAGCTAACTAACTGGGTCCTAGCGTACTAACTCGACTTAG
CGCACTAACTTGATTTAGCGTATTAACTTGACTTAATGTACTAACTCGAC
ATAGTGAACTAACTCGACTTAGCGGACTAACTTGCCTTGTGATGATCATC
AAGGCTCTGGTTCTGGTGAACCTGATGTTGGTGCTGATGAATCTGATGAA
TCTGGTGGTGGTGATAAGGATCTGGTGATTATTGTGGTGTTGATGGTTGT
TCTGGTGATTTTGATTGTGGTGATGATGTCTCTGATGATTCTGAacgtgg
aatcaatggtgttgacGAATCTGACGCTGCAATCAATGATGTTGATGAAT
CTGATGCTGGGATCAAAGGTAATGGTGATCCTGAAGTTAAAGCAAAGGTG
CTGAATGAATCTAATGTTGAAGTCAATGATGCTAGCGATTCTAATGCTGA
AACCAATGGATGGCGGGATCAACAGTGTTGATAAGTCTGATGATCACCCT
TAGTTTCTTCATCACAATCCAGCACCATTGCTCCCACCATCACTTTCATA
TTTATAAGCACCATTTATTCAATCGTCagattcaccagcaccattgattc
accaTCAAATTTATCAGCATCGGTTCCAACATCAGATTCATCAACAAAAT
TGATTATATTTTCAGAACCACCAGTTCCATTATCACCACCATCAGAATCA
CCAGAGCCATCATCATAGCCACCAGAAAAATCATCACCACCACCAGATCA
CTCATTACATCCGG Run BLAST on NCBI transcript from alignment at sc0003531:5137..6100 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042602 ID=TCONS_00042602|Name=TCONS_00042602|organism=Clytia hemisphaerica|type=transcript|length=964bp|location=Sequence derived from alignment at sc0003531:5137..6100 (Clytia hemisphaerica)
CCGGATGTAATGAGTGATCTGGTGGTGGTGATGATTTTTCTGGTGGCTAT
GATGATGGCTCTGGTGATTCTGATGGTGGTGATAATGGAACTGGTGGTTC
TGAAAATATAATCAATTTTGTTGATGAATCTGATGTTGGAACCGATGCTG
ATAAATTTGAtggtgaatcaatggtgctggtgaatctGACGATTGAATAA
ATGGTGCTTATAAATATGAAAGTGATGGTGGGAGCAATGGTGCTGGATTG
TGATGAAGAAACTAAGGGTGATCATCAGACTTATCAACACTGTTGATCCC
GCCATCCATTGGTTTCAGCATTAGAATCGCTAGCATCATTGACTTCAACA
TTAGATTCATTCAGCACCTTTGCTTTAACTTCAGGATCACCATTACCTTT
GATCCCAGCATCAGATTCATCAACATCATTGATTGCAGCGTCAGATTCgt
caacaccattgattccacgtTCAGAATCATCAGAGACATCATCACCACAA
TCAAAATCACCAGAACAACCATCAACACCACAATAATCACCAGATCCTTA
TCACCACCACCAGATTCATCAGATTCATCAGCACCAACATCAGGTTCACC
AGAACCAGAGCCTTGATGATCATCACAAGGCAAGTTAGTCCGCTAAGTCG
AGTTAGTTCACTATGTCGAGTTAGTACATTAAGTCAAGTTAATACGCTAA
ATCAAGTTAGTGCGCTAAGTCGAGTTAGTACGCTAGGACCCAGTTAGTTA
GCTAATTATATCTGTTTTGTACATGGCCCTAACAAACCACCGTactgaaa
aaatcaattcaagttaaaattttatgtctagaaataatcagtaatatgta
acagtatgctctgaaacaactttttatgaagttgaactatcgttagggct
acaatgctaaaaaatgagaaacctacattctcggggtttactacattctc
ggggtcaggtgctg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042602-exon-sc0003531-1491911889:5137..6100 | TCONS_00042602-exon-sc0003531-1491911889:5137..6100 | Clytia hemisphaerica | exon |
| TCONS_00042602-exon-sc0003531-1510915933:5137..6100 | TCONS_00042602-exon-sc0003531-1510915933:5137..6100 | Clytia hemisphaerica | exon |
| TCONS_00042602-exon-sc0003531-1575043694:5137..6100 | TCONS_00042602-exon-sc0003531-1575043694:5137..6100 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003531 | supercontig | sc0003531:5137..6100 . |
Blast
The following BLAST results are available for this feature:
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