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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042585 ID=TCONS_00042585|Name=TCONS_00042585|organism=Clytia hemisphaerica|type=transcript|length=1243bp
GAAGTTGCAAAAGATTAGAGGATTCGATGAAAGAATGATTCAGAAACCAC
CTCAACACCTGGCACCATACTCCATGCTAAACATCTTCTCCGAAATTCAT
GATGCTATGGAGGAAGTAAAACAACTACAGATAGAACGTGGAAATGGCGA
CCTTCTCACTGGTATTGGAGTTGGACTTGGAGGAGCTTTAGAAGCCGCTG
CAGGAGGAACAAGCCAAATCATTGGAGCTTTAGGAAGTGGAATACAAGGT
GTCCTAACTGGAGTTGGTAACTTGGATGAAAAGATTGTTACTTCCCTTGG
TTCAGCTGCAGGTAATATCATCACTTCTACTGGCGATGCAGTGGAATCTG
CTGGGAAAGGAATAGGAAGTATCCTCAACATCTTTGGTGGAGTCGGTGGA
ACTATTAAATGGGTCGTCTTTCTAGCTTTAATTGGAGCTTTTGTATACCT
GAACCGAGGCTCCATAATAAAACGTTTcaagaaaaataccaaaatggaAT
TCTCACCAGCCCAGCAACGGTTAGAAAAAGAGGAAGAACATTCCCATAAA
GAAATGCATAGGGAACGACGTCACCACCGTCATCATCAAAGAcattgctt
taaaacgcctaatgaagggaaaacattcgaaactgtAACAGAAGAACCTG
CTACGAGGGATCTCTTCATGTACGTTCATACTGGAAAGAAAAGAAGCCAC
GTCCATAAGACCAAACGACACCATGGACATGTACTGGCAATACATTGCCG
ATCAACTGACCAAGAAGAGCAAAAACATGGCATCAAGACAGAAGTCTATT
TATCCATAGAAGGAGAAACAAAGACCTTTATTGCTCTGGTGGACACTGGT
TCTAGTCATTCCTTATTGAACAAAAGAATTTGGGATAAGGCTGAAATCGC
TCCATTTCTGACCCACAATGAAGGGACTATATTAGCATAATCTACTGGAG
GTGTCCTTGAGACTGCTGGAAGTGCAATCATACCAGCTAGCATAGCAGAC
CCACTGTCATTGAAAACCCAGGAATTTATGGTtgtcccaaacattgaaga
agatGTAATCATTGGAATGAATATTTTGAGCTCGGAGAAGGCTATCATCA
ACTTTTCAGAACAAACCATAACCAGTGCGAGCAGGAGAAAGAGATTCTTT
GCGAGTAACAAACGAAAAGAAACACCCAGATTTTGGAGTATCCTAGCAGT
TATAGCCGCTATTACTGCATTGACGGTTGCGATCCTGTACGTT Run BLAST on NCBI transcript from alignment at sc0003513:8609..9851+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042585 ID=TCONS_00042585|Name=TCONS_00042585|organism=Clytia hemisphaerica|type=transcript|length=1243bp|location=Sequence derived from alignment at sc0003513:8609..9851+ (Clytia hemisphaerica)
GAAGTTGCAAAAGATTAGAGGATTCGATGAAAGAATGATTCAGAAACCAC
CTCAACACCTGGCACCATACTCCATGCTAAACATCTTCTCCGAAATTCAT
GATGCTATGGAGGAAGTAAAACAACTACAGATAGAACGTGGAAATGGCGA
CCTTCTCACTGGTATTGGAGTTGGACTTGGAGGAGCTTTAGAAGCCGCTG
CAGGAGGAACAAGCCAAATCATTGGAGCTTTAGGAAGTGGAATACAAGGT
GTCCTAACTGGAGTTGGTAACTTGGATGAAAAGATTGTTACTTCCCTTGG
TTCAGCTGCAGGTAATATCATCACTTCTACTGGCGATGCAGTGGAATCTG
CTGGGAAAGGAATAGGAAGTATCCTCAACATCTTTGGTGGAGTCGGTGGA
ACTATTAAATGGGTCGTCTTTCTAGCTTTAATTGGAGCTTTTGTATACCT
GAACCGAGGCTCCATAATAAAACGTTTcaagaaaaataccaaaatggaAT
TCTCACCAGCCCAGCAACGGTTAGAAAAAGAGGAAGAACATTCCCATAAA
GAAATGCATAGGGAACGACGTCACCACCGTCATCATCAAAGAcattgctt
taaaacgcctaatgaagggaaaacattcgaaactgtAACAGAAGAACCTG
CTACGAGGGATCTCTTCATGTACGTTCATACTGGAAAGAAAAGAAGCCAC
GTCCATAAGACCAAACGACACCATGGACATGTACTGGCAATACATTGCCG
ATCAACTGACCAAGAAGAGCAAAAACATGGCATCAAGACAGAAGTCTATT
TATCCATAGAAGGAGAAACAAAGACCTTTATTGCTCTGGTGGACACTGGT
TCTAGTCATTCCTTATTGAACAAAAGAATTTGGGATAAGGCTGAAATCGC
TCCATTTCTGACCCACAATGAAGGGACTATATTAGCATAATCTACTGGAG
GTGTCCTTGAGACTGCTGGAAGTGCAATCATACCAGCTAGCATAGCAGAC
CCACTGTCATTGAAAACCCAGGAATTTATGGTtgtcccaaacattgaaga
agatGTAATCATTGGAATGAATATTTTGAGCTCGGAGAAGGCTATCATCA
ACTTTTCAGAACAAACCATAACCAGTGCGAGCAGGAGAAAGAGATTCTTT
GCGAGTAACAAACGAAAAGAAACACCCAGATTTTGGAGTATCCTAGCAGT
TATAGCCGCTATTACTGCATTGACGGTTGCGATCCTGTACGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042585-exon-sc0003513-1491911889:8609..9851 | TCONS_00042585-exon-sc0003513-1491911889:8609..9851 | Clytia hemisphaerica | exon |
| TCONS_00042585-exon-sc0003513-1510915933:8609..9851 | TCONS_00042585-exon-sc0003513-1510915933:8609..9851 | Clytia hemisphaerica | exon |
| TCONS_00042585-exon-sc0003513-1575043694:8609..9851 | TCONS_00042585-exon-sc0003513-1575043694:8609..9851 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003513 | supercontig | sc0003513:8609..9851 + |
Blast
The following BLAST results are available for this feature:
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