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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042556 ID=TCONS_00042556|Name=TCONS_00042556|organism=Clytia hemisphaerica|type=transcript|length=1000bp
accttttataaggcatttccccttatcgctccttttatttacttgatttt
ttctctcgcgccagatttaattcgaaacccgtgtattagatgatgatttt
tgaggATATTTTCTTTCTATAAAAATGTCTCTGTTTTTTTAGGCCGCACT
GTATGTAGAACCTCTAATTAACAGACGCTCTCAAATGCTGACATTAATTA
GGAAATATGAATCCATTTCCCCaaatggtgtccgctaattagaggttcca
atTATACATACACTAGCCTATCTAAAATTTATGGggggatttcatttttt
tcgtttaatattttattgattaaaatagaGAAACGATTCATCACGTAGCG
TAGCACCGCGatgttcttaaatattttcGAGATTTTAGATTTGAAGCACT
TCTGAAAGTTCGAAAAATCTATTTCCAAAAACATCTTGGTTTTAGAAAAG
GAAACAATACTACTACTTGGGTTTTTTAGCATTGAACATTGGCATCATCT
CATCAATAACTTCCTTACACGTTTTAAAGTCCACATCCacatagtcttaa
aatgttcttaacttgttcttattattttggccattgaagctttatgttct
tatatagtttgttcttatataaataACGTGTATCGTTAATTTTAAAGGAT
AAAACATCTATTGTAATATAAGGTATTTTTGTATAAGGTCAATTTAAATG
GCCAGTAGTCAAAAGATTTGTAATTAGCAACGCTCTTCAGGATGTGGGCG
CTCTCCTTTTAGATTTAAAATCTTAGGTAAGAGGGCGGCGCTACATAGAC
GATAAAGCCTATGttcattttatacttttttcagtttctatgttacacgc
tttttttataagaatatcagggtgagattcgGAGTTAGCATATtctttag
aacaatagaaaaataagaataatgctcaccctcagtcAAAAtacattatt
cttataaaaaaacgtgaattTCACGATTTGTAAATACATGCATgtcacca Run BLAST on NCBI transcript from alignment at sc0003489:10396..11395 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042556 ID=TCONS_00042556|Name=TCONS_00042556|organism=Clytia hemisphaerica|type=transcript|length=1000bp|location=Sequence derived from alignment at sc0003489:10396..11395 (Clytia hemisphaerica)
tggtgacATGCATGTATTTACAAATCGTGAaattcacgtttttttataag
aataatgtaTTTTgactgagggtgagcattattcttatttttctattgtt
ctaaagaATATGCTAACTCcgaatctcaccctgatattcttataaaaaaa
gcgtgtaacatagaaactgaaaaaagtataaaatgaaCATAGGCTTTATC
GTCTATGTAGCGCCGCCCTCTTACCTAAGATTTTAAATCTAAAAGGAGAG
CGCCCACATCCTGAAGAGCGTTGCTAATTACAAATCTTTTGACTACTGGC
CATTTAAATTGACCTTATACAAAAATACCTTATATTACAATAGATGTTTT
ATCCTTTAAAATTAACGATACACGTtatttatataagaacaaactatata
agaacataaagcttcaatggccaaaataataagaacaagttaagaacatt
ttaagactatgtGGATGTGGACTTTAAAACGTGTAAGGAAGTTATTGATG
AGATGATGCCAATGTTCAATGCTAAAAAACCCAAGTAGTAGTATTGTTTC
CTTTTCTAAAACCAAGATGTTTTTGGAAATAGATTTTTCGAACTTTCAGA
AGTGCTTCAAATCTAAAATCTCgaaaatatttaagaacatCGCGGTGCTA
CGCTACGTGATGAATCGTTTCtctattttaatcaataaaatattaaacga
aaaaaatgaaatccccCCATAAATTTTAGATAGGCTAGTGTATGTATAat
tggaacctctaattagcggacaccatttGGGGAAATGGATTCATATTTCC
TAATTAATGTCAGCATTTGAGAGCGTCTGTTAATTAGAGGTTCTACATAC
AGTGCGGCCTAAAAAAACAGAGACATTTTTATAGAAAGAAAATATcctca
aaaatcatcatctaatacacgggtttcgaattaaatctggcgcgagagaa
aaaatcaagtaaataaaaggagcgataaggggaaatgccttataaaaggt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042556-exon-sc0003489-1491911889:10396..11395 | TCONS_00042556-exon-sc0003489-1491911889:10396..11395 | Clytia hemisphaerica | exon |
| TCONS_00042556-exon-sc0003489-1510915933:10396..11395 | TCONS_00042556-exon-sc0003489-1510915933:10396..11395 | Clytia hemisphaerica | exon |
| TCONS_00042556-exon-sc0003489-1575043694:10396..11395 | TCONS_00042556-exon-sc0003489-1575043694:10396..11395 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003489 | supercontig | sc0003489:10396..11395 . |
Blast
The following BLAST results are available for this feature:
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