TCONS_00042555 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042555
Unique NameTCONS_00042555
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length152

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042555 ID=TCONS_00042555|Name=TCONS_00042555|organism=Clytia hemisphaerica|type=transcript|length=152bp
CTACCATCTTGCGTGTATTTACCTAAGTTTAACCGCCCTCGATACTTAGA
GTTTATGGCGGCcattttttggaacattttgatTGCGTGCAGTTCGCGCG
GCAATGGAATATTCTTACAGGCAAgctcaaataaaaaagaataacaaaaa
aa
Run BLAST on NCBI

transcript from alignment at sc0003489:3328..3479

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042555 ID=TCONS_00042555|Name=TCONS_00042555|organism=Clytia hemisphaerica|type=transcript|length=152bp|location=Sequence derived from alignment at sc0003489:3328..3479 (Clytia hemisphaerica)
tttttttgttattcttttttatttgagcTTGCCTGTAAGAATATTCCATT
GCCGCGCGAACTGCACGCAatcaaaatgttccaaaaaatgGCCGCCATAA
ACTCTAAGTATCGAGGGCGGTTAAACTTAGGTAAATACACGCAAGATGGT
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026373XLOC_026373Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042555-exon-sc0003489-1491911889:3328..3479TCONS_00042555-exon-sc0003489-1491911889:3328..3479Clytia hemisphaericaexon
TCONS_00042555-exon-sc0003489-1510915933:3328..3479TCONS_00042555-exon-sc0003489-1510915933:3328..3479Clytia hemisphaericaexon
TCONS_00042555-exon-sc0003489-1575043694:3328..3479TCONS_00042555-exon-sc0003489-1575043694:3328..3479Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003489supercontigsc0003489:3328..3479 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042555 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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