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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042520 ID=TCONS_00042520|Name=TCONS_00042520|organism=Clytia hemisphaerica|type=transcript|length=1035bp
CTGTTGAGAAATAAGCTCAGATTTCATGGTTTTCACTTAAAAACAatcca
taattttttttattattaagtATGAAATATATTTACCAGGACAATGGTTA
ACTGGCACAACAAACCTAAGTAAAAATAATGACAATTTAAAGTGACAAAT
AAAAATTCTAGTTACTCCCTGGAAATAACAGCAAGGtgttaaatttctta
ttacaaaaagGGTGGAAAAGGTGAAAACATCATCACATGGCCttctaaaa
ttgtaaaaacttcaTAACTACTTTATAACTTAAACTCAGaaatttttcag
ccaaagtaTTTAAGATAACAAGGGCATGTCAATTTTGTCAACTAagagaa
catttttttaaatttcaattgagATCATCCCAAAGTATGTTAGCAGACAA
TTTGAATAGCTGACAGATTTTGAAAACTGGAGAGGCCAACTGTGTTTCAT
CCGAGGGGGGGggctacttaggcaaaatgggtgccgagtatgtgcgagcc
ataaggggtcccttttttacaccctcaaaagtctctcaaaggggtacaaa
aaccttttaaaagaaaattgagtctctatataagggtccaaaaatcacga
aaatcaacaattttgaGAAAAGATGACTTACCGGTCACCTCACAAACCTA
GTACTCTGGGTACGTTTAATTAACTAGAGAGTTACAAGTCTGCTTAAGAA
ATNtttaaaagaaaattgagtctctgtaagggtccaaaaatcacgaaaat
caacaattttgaGAAAAGATGACTTACCGGTCACCTCACAAACCTAGTAC
TCTGGGTACGTTTAATTAACTAGAGAGTTACAAATCTGCTTAAGAAATTC
AAGGAAGGACCTTTCAATAAAATTCTATGTTACAATTTATAAATCTCAAT
ATATATtgtataaaaaaatagaaaaatatcaagCAGTCTCACAAAGGATG
AGAAAAATCAGTAGTGTAATTCGCCCCCGATTGTCTAACCAAAGGGCAGG
GCGATAATGCAAGTATCATATTCTTGTCATTTCAC Run BLAST on NCBI transcript from alignment at sc0003472:24..1058 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042520 ID=TCONS_00042520|Name=TCONS_00042520|organism=Clytia hemisphaerica|type=transcript|length=1035bp|location=Sequence derived from alignment at sc0003472:24..1058 (Clytia hemisphaerica)
GTGAAATGACAAGAATATGATACTTGCATTATCGCCCTGCCCTTTGGTTA
GACAATCGGGGGCGAATTACACTACTGATTTTTCTCATCCTTTGTGAGAC
TGcttgatatttttctatttttttatacaATATATATTGAGATTTATAAA
TTGTAACATAGAATTTTATTGAAAGGTCCTTCCTTGAATTTCTTAAGCAG
ATTTGTAACTCTCTAGTTAATTAAACGTACCCAGAGTACTAGGTTTGTGA
GGTGACCGGTAAGTCATCTTTTCtcaaaattgttgattttcgtgattttt
ggacccttacagagactcaattttcttttaaaNATTTCTTAAGCAGACTT
GTAACTCTCTAGTTAATTAAACGTACCCAGAGTACTAGGTTTGTGAGGTG
ACCGGTAAGTCATCTTTTCtcaaaattgttgattttcgtgatttttggac
ccttatatagagactcaattttcttttaaaaggtttttgtacccctttga
gagacttttgagggtgtaaaaaagggaccccttatggctcgcacatactc
ggcacccattttgcctaagtagccCCCCCCCTCGGATGAAACACAGTTGG
CCTCTCCAGTTTTCAAAATCTGTCAGCTATTCAAATTGTCTGCTAACATA
CTTTGGGATGATctcaattgaaatttaaaaaaatgttctctTAGTTGACA
AAATTGACATGCCCTTGTTATCTTAAAtactttggctgaaaaatttCTGA
GTTTAAGTTATAAAGTAGTTAtgaagtttttacaattttagaaGGCCATG
TGATGATGTTTTCACCTTTTCCACCctttttgtaataagaaatttaacaC
CTTGCTGTTATTTCCAGGGAGTAACTAGAATTTTTATTTGTCACTTTAAA
TTGTCATTATTTTTACTTAGGTTTGTTGTGCCAGTTAACCATTGTCCTGG
TAAATATATTTCATacttaataataaaaaaaattatggatTGTTTTTAAG
TGAAAACCATGAAATCTGAGCTTATTTCTCAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042520-exon-sc0003472-1491911889:24..1058 | TCONS_00042520-exon-sc0003472-1491911889:24..1058 | Clytia hemisphaerica | exon |
| TCONS_00042520-exon-sc0003472-1510915933:24..1058 | TCONS_00042520-exon-sc0003472-1510915933:24..1058 | Clytia hemisphaerica | exon |
| TCONS_00042520-exon-sc0003472-1575043694:24..1058 | TCONS_00042520-exon-sc0003472-1575043694:24..1058 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003472 | supercontig | sc0003472:24..1058 . |
Blast
The following BLAST results are available for this feature:
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