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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042505 ID=TCONS_00042505|Name=TCONS_00042505|organism=Clytia hemisphaerica|type=transcript|length=1013bp
CTACCTTTTCCTAAACCCATAAGTGGAACAGGCGCTTTTGAGCTTGAATG
TCTTTCTTGTTGATGATGAAAATTGGGGAGGAGAATCGAGCATCTTTGAA
CGCAAACCGGATAAGCGGCGGTTGTTGCTCCTTGTAGCCGGACTgctagt
ttgaaaatattctgtGAAGATGGattcatttttctattttttatataatt
tctaTAAACTAAAACAGACAATGATTTAGATAACAACAAATCGAAACGAG
TCAGTAACAATTGATTGTGTTTGATAGgataaataaaccagccgaggctg
gaaagTCAGCCAATATAGCTAGATTATTAGTTGGATAGCTTGTAAAGAAT
TTAAGTAGCTGCGATGGAAGGAAGGACTAGATGCATAAAGAATCAAgcga
aattggaaaattttaagaGCTAAAAACcacattttgcttaaaaatgtttG
TCCAGGTTACTCAAAACTCCTAGTAGTTAGATTGAGTAGAAAATGAACAT
TCCATATGTTAAGCatttaaattcaacttttaacatttttgaagataaag
taaaaatctagggacaaattacaaattacaaaattttagaTATGTCCTGT
TATAAACCTGtacaaaaattttatcaaaaaaatcaaatagacgaatcatt
tacatttataaatacaagtagttttctttttgaataataGTTCAATAACT
TTATTCCAGTAGCATGTTTACAATAAccaagcaaaacaaaacaatgcaaT
ACGAAATGGTTAATGGACAAGTAGATAGCACTTATGATATCATTTTGATC
ACAACGCGTACAATCTTAAAATTATGTAATATTGCCGCCTTTATTGGCAC
CTTTTAAAGTTATGTATGtacacattttcttttttataagcaaccaggtt
gctaaggtCAAATCAAATATTTTCGGGGTATCTCTATTCTAACAAATGGA
AATGGTGTTACTCGCCCTGAAATGcattttaaaggtataattgTGGCCCC
CTataaaaaattt Run BLAST on NCBI transcript from alignment at sc0003460:10540..11552 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042505 ID=TCONS_00042505|Name=TCONS_00042505|organism=Clytia hemisphaerica|type=transcript|length=1013bp|location=Sequence derived from alignment at sc0003460:10540..11552 (Clytia hemisphaerica)
aaattttttatAGGGGGCCAcaattatacctttaaaatgCATTTCAGGGC
GAGTAACACCATTTCCATTTGTTAGAATAGAGATACCCCGAAAATATTTG
ATTTGaccttagcaacctggttgcttataaaaaagaaaatgtgtaCATAC
ATAACTTTAAAAGGTGCCAATAAAGGCGGCAATATTACATAATTTTAAGA
TTGTACGCGTTGTGATCAAAATGATATCATAAGTGCTATCTACTTGTCCA
TTAACCATTTCGTAttgcattgttttgttttgcttggTTATTGTAAACAT
GCTACTGGAATAAAGTTATTGAACtattattcaaaaagaaaactacttgt
atttataaatgtaaatgattcgtctatttgatttttttgataaaattttt
gtaCAGGTTTATAACAGGACATAtctaaaattttgtaatttgtaatttgt
ccctagatttttactttatcttcaaaaatgttaaaagttgaatttaaatG
CTTAACATATGGAATGTTCATTTTCTACTCAATCTAACTACTAGGAGTTT
TGAGTAACCTGGACaaacatttttaagcaaaatgtgGTTTTTAGCtctta
aaattttccaatttcgcTTGATTCTTTATGCATCTAGTCCTTCCTTCCAT
CGCAGCTACTTAAATTCTTTACAAGCTATCCAACTAATAATCTAGCTATA
TTGGCTGActttccagcctcggctggtttatttatcCTATCAAACACAAT
CAATTGTTACTGACTCGTTTCGATTTGTTGTTATCTAAATCATTGTCTGT
TTTAGTTTAtagaaattatataaaaaatagaaaaatgaatCCATCTTCac
agaatattttcaaactagcAGTCCGGCTACAAGGAGCAACAACCGCCGCT
TATCCGGTTTGCGTTCAAAGATGCTCGATTCTCCTCCCCAATTTTCATCA
TCAACAAGAAAGACATTCAAGCTCAAAAGCGCCTGTTCCACTTATGGGTT
TAGGAAAAGGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042505-exon-sc0003460-1491911889:10540..11552 | TCONS_00042505-exon-sc0003460-1491911889:10540..11552 | Clytia hemisphaerica | exon |
| TCONS_00042505-exon-sc0003460-1510915933:10540..11552 | TCONS_00042505-exon-sc0003460-1510915933:10540..11552 | Clytia hemisphaerica | exon |
| TCONS_00042505-exon-sc0003460-1575043694:10540..11552 | TCONS_00042505-exon-sc0003460-1575043694:10540..11552 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003460 | supercontig | sc0003460:10540..11552 . |
Blast
The following BLAST results are available for this feature:
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