TCONS_00042504 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042504
Unique NameTCONS_00042504
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length143

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042504 ID=TCONS_00042504|Name=TCONS_00042504|organism=Clytia hemisphaerica|type=transcript|length=143bp
GCTTGATGAAAAATTCTGACAATTTTCTGACTCCTCCAGCATTTTTGTCT
GCCAAGTTGGTTGGATTGGTTGGCCGACGCAAACAGCCGGCGCAaacaga
acatatttttgattgtctCCCTCTGCTGTTGTTGTAGCCAAAC
Run BLAST on NCBI

transcript from alignment at sc0003460:9299..9441

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042504 ID=TCONS_00042504|Name=TCONS_00042504|organism=Clytia hemisphaerica|type=transcript|length=143bp|location=Sequence derived from alignment at sc0003460:9299..9441 (Clytia hemisphaerica)
GTTTGGCTACAACAACAGCAGAGGGagacaatcaaaaatatgttctgttT
GCGCCGGCTGTTTGCGTCGGCCAACCAATCCAACCAACTTGGCAGACAAA
AATGCTGGAGGAGTCAGAAAATTGTCAGAATTTTTCATCAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026331XLOC_026331Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042504-exon-sc0003460-1491911889:9299..9441TCONS_00042504-exon-sc0003460-1491911889:9299..9441Clytia hemisphaericaexon
TCONS_00042504-exon-sc0003460-1510915933:9299..9441TCONS_00042504-exon-sc0003460-1510915933:9299..9441Clytia hemisphaericaexon
TCONS_00042504-exon-sc0003460-1575043694:9299..9441TCONS_00042504-exon-sc0003460-1575043694:9299..9441Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003460supercontigsc0003460:9299..9441 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042504 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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