TCONS_00042469 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042469
Unique NameTCONS_00042469
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length166

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042469 ID=TCONS_00042469|Name=TCONS_00042469|organism=Clytia hemisphaerica|type=transcript|length=166bp
ATGAGCAATGAATTGGATCGACATTTGACTCGACTATATTGCTTTATTGC
TATATTGCTTTCATGGTCAATACAGgagATACTGAAATCACACAGAAAAT
CCCGATTGTTGGGAGGAAATTATTAGATCTGGTTGAACTATATCGATTGG
TTCAAAAACATGGTGG
Run BLAST on NCBI

transcript from alignment at sc0003444:7362..7761-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042469 ID=TCONS_00042469|Name=TCONS_00042469|organism=Clytia hemisphaerica|type=transcript|length=400bp|location=Sequence derived from alignment at sc0003444:7362..7761- (Clytia hemisphaerica)
ATGAGCAATGAATTGGATCGACATTTGACTCGACTATATTGCTTTATTGC
TATATTGCTTTCATGGTCAATACAGGTAAACAATTTAATTTTTTTTAATT
TCATTTCCATTCATTCAGAGGTGGTCGAAGAGGCGAAAAGTAGATCCTAA
ATCTTACATCCTTTTAAGCGTATCCATTAGCTTACACAGTGTTTTCAACC
AACAGAAAGAATGACTTTTCCCGCTTCCCTAACCACACGAGCACAAAATC
TCTTAATTCTACTGTGCGGCTGTTTTTTATATAATAAAAAAATAAATTTT
CTTTTTCAGGAGATACTGAAATCACACAGAAAATCCCGATTGTTGGGAGG
AAATTATTAGATCTGGTTGAACTATATCGATTGGTTCAAAAACATGGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026302XLOC_026302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042469-exon-sc0003444-1575043694:7687..7761TCONS_00042469-exon-sc0003444-1575043694:7687..7761Clytia hemisphaericaexon
TCONS_00042469-exon-sc0003444-1575043694:7362..7452TCONS_00042469-exon-sc0003444-1575043694:7362..7452Clytia hemisphaericaexon
TCONS_00042469-exon-sc0003444-1510915933:7687..7761TCONS_00042469-exon-sc0003444-1510915933:7687..7761Clytia hemisphaericaexon
TCONS_00042469-exon-sc0003444-1510915933:7362..7452TCONS_00042469-exon-sc0003444-1510915933:7362..7452Clytia hemisphaericaexon
TCONS_00042469-exon-sc0003444-1491911889:7687..7761TCONS_00042469-exon-sc0003444-1491911889:7687..7761Clytia hemisphaericaexon
TCONS_00042469-exon-sc0003444-1491911889:7362..7452TCONS_00042469-exon-sc0003444-1491911889:7362..7452Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003444supercontigsc0003444:7362..7761 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042469 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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