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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042456 ID=TCONS_00042456|Name=TCONS_00042456|organism=Clytia hemisphaerica|type=transcript|length=236bp
CTCCTTGTCAATCCAGTGAACATTGTATGGGCTCCAGTTGTTGTGAAACG
CAATGTCAATCCATGCCCAGGGTCTGTTCAGCAATATACCAAGACTAATC
ATTGTGGTCGAGGATGCAGACGAGATTGTGGGTAATGAATCAAGTTATTT
TAAATGTTAGATGGCGAGAGAAACTCACTATCAAAGTTACCATAGTTACC
TCATAAGAGGTTTTTCTAAGGGATACTCGACGATCa Run BLAST on NCBI transcript from alignment at sc0003434:1152..2607+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042456 ID=TCONS_00042456|Name=TCONS_00042456|organism=Clytia hemisphaerica|type=transcript|length=1456bp|location=Sequence derived from alignment at sc0003434:1152..2607+ (Clytia hemisphaerica)
CTCCTTGTCAATCCAGTGAACATTGTATGGGCTCCAGTTGTTGTGAAACG
CAATGTCAATCCATGCCCAGGGTCTGTTCAGCAATATACCAAGGTGTTTA
ATTGATTATTTTACTACGTGGTGCCAAATTGCGGTAACTTTGAATCgtta
attttgaattaaaattgattaccATTGACCATCCAAGGTACCCTTTTATT
CCCATGTCAATCATCGGATTATCANGTGATTGTTCTTTTTCGACACTCTG
ATTGGATTTCATGTTGTTTTCCAAACGATGCCTTTAAGTCGGAATAAAGA
CAGGAAAATTAAATCTCCTACTTGTGCATCTCATTTAAGAAATGTCCGAT
ATCTTTTGGATTATGTTCTAATATTGTCTTAAATTTCCACTGTAGAGGAA
CACCAAGTATCAAGGCACGAATATAATTAGTTTCAGGTGAAATTCACTGT
TGatatatctgaaaaagctaatcaaaATTCAGAAACAACGCATGTTaaac
taaaagtcaaaaactattcaaatcaaaaaagaaatcatatcacCAACTCA
ACGCGACAAGGACAAAAGTGGCAAACTGACAAATCAACACAGCAACAAAA
CAAACTCAACTAAAATGACAAATTAACATaccaaaaaaatccaaaaccgA
GACAAATAGATAGATATTAATTAGCGTCAATAGTCGTGAATGATCGCATT
GGCACGCTCGCAGATAAAGATACTTTACGTACAACCTTGATAAAAAATCT
TCTGGCAGAAGGGTTGATACATAGGTAATAAGTTTCAATCTTCTTTCTTG
TTCTTCTTTTAGATCGTTGTCCCCCGAAAGACTTGTTCACATGTCGAGAT
GTTGTGAAGTACGCTCCTTGTCAATCCAGTGAACATTGTATGGGCTCCAG
TTGTTGTGAAACGCAATGCCAATCCATGCCCAGGGTCTGTTCAACAATAT
ACCAAGGTGTTTAATTGATTATTTTACTACGTGGTGTCGAATTGTGGTAA
CTTTGAATCgttaattttgaattaaaattgattaccATTGACCATCCAAG
GTACCCTTTTATTCCCATGTCAATCATCGGATTATCATTTAAACTGGGAC
TCCGGAAATCGCCGGGATCGCATGTCTATacatataattataaaaatatt
agNATTTAAACTGGGACTCCGGAAATCGCCGGGATCGCATGTCTATacat
ataattataaaaatattagtgcctttttatatttcatctttattttattt
agtattttcaacactttctctccttgaggtcagatctctgatcttcacca
tatataatTCCAGACTAATCATTGTGGTCGAGGATGCAGACGAGATTGTG
GGTAATGAATCAAGTTATTTTAAATGTTAGATGGCGAGAGAAACTCACTA
TCAAAGTTACCATAGTTACCTCATAAGAGGTTTTTCTAAGGGATACTCGA
CGATCa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042456-exon-sc0003434-1491911889:1152..1244 | TCONS_00042456-exon-sc0003434-1491911889:1152..1244 | Clytia hemisphaerica | exon |
| TCONS_00042456-exon-sc0003434-1510915933:1152..1244 | TCONS_00042456-exon-sc0003434-1510915933:1152..1244 | Clytia hemisphaerica | exon |
| TCONS_00042456-exon-sc0003434-1575043694:1152..1244 | TCONS_00042456-exon-sc0003434-1575043694:1152..1244 | Clytia hemisphaerica | exon |
| TCONS_00042456-exon-sc0003434-1491911889:2465..2607 | TCONS_00042456-exon-sc0003434-1491911889:2465..2607 | Clytia hemisphaerica | exon |
| TCONS_00042456-exon-sc0003434-1510915933:2465..2607 | TCONS_00042456-exon-sc0003434-1510915933:2465..2607 | Clytia hemisphaerica | exon |
| TCONS_00042456-exon-sc0003434-1575043694:2465..2607 | TCONS_00042456-exon-sc0003434-1575043694:2465..2607 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003434 | supercontig | sc0003434:1152..2607 + |
Blast
The following BLAST results are available for this feature:
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