TCONS_00042413 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042413
Unique NameTCONS_00042413
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1096

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042413 ID=TCONS_00042413|Name=TCONS_00042413|organism=Clytia hemisphaerica|type=transcript|length=1096bp
TTTTAGTTGGCACAACTCTTGAACAATTACAAAATCAATTGAAGAAATTC
GAAGATAAGAACCAATATCTGGAAGATGAAATCAATCACCTTAAACGGAC
ACAACAAGTGTCAAATAAtcaaaatcagaaatcaaatgCACAGGAAAATG
TTGAATCGACATTGCATCCTTTTGGCTTTCACCAAGGGCACTTGCATAAT
GATCATGTACCAATGATAAATCACCACAAAGGTGATTTTCACGAACAGAG
GCTAATGGGAATTCGTCAAGAAACGGAATATTATCGCCAACAACTTGAGC
TTGAACAGCTAAGACAGCAACTTCACAATCTGAGAGGACATCCTAACCAT
CCGGTTCTTCCATCAATCGGAACAACAATAACAGCCAACCATTATCCTAC
ACAGCAACAACATCCGCAACAGCATCCTTGGCAACAACACATACCATTAA
TGGTGGCCAATAATCAACATTTTAATGAGatttcaACGGAGAACAATTTG
TATTCAATGACACTTCATAAACGAGAAGAAGTATTCGAGAAAAGTCCCTA
CGATCCAACATCTGGGTTCACAATCTTCTGGGATTTTCTGCACGTGCCAA
CCACAACTGACCAATCAGAAAACAACAAGTACCATATCTCAGTAACTCTT
TACAAAGGACAAAATAAAGTCTCTGAGACAAGAAACCTACCAGTTCTACA
TCAAAACAATGGGAATGGATTACATGAACGTGCTTTTGGATTTGGTAATG
ATGAAACAACTCCAGGATTTGTGACGATAAGTGTGAAACAAGTTTTCCCC
AAGTGTTTTCCAAACGAGGACATATCACTGATCGTGTCATTACAAATCac
gaaaaatgacgtcattcataACAATGATGGTTTCCAAGACAACGATCAAC
CAATGAGATCATTACAAATGGGAGAATATGGTTGGTGCAAATTGACGCTT
TTTGATTCGTTCAATAGAGTCACGTGTGGAAGGTAATATTTCATGAAACA
GTGCAGTCCCAGCTggaacacaacgttgtttcgacgttcacctaacgtta
tatggacgttgtgaacattagatgaacgttgaaacgacgttgtgtg
Run BLAST on NCBI

protein sequence of TCONS_00042413-protein

>TCONS_00042413-protein ID=TCONS_00042413-protein|Name=TCONS_00042413-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
LVGTTLEQLQNQLKKFEDKNQYLEDEINHLKRTQQVSNNQNQKSNAQENV
ESTLHPFGFHQGHLHNDHVPMINHHKGDFHEQRLMGIRQETEYYRQQLEL
EQLRQQLHNLRGHPNHPVLPSIGTTITANHYPTQQQHPQQHPWQQHIPLM
VANNQHFNEISTENNLYSMTLHKREEVFEKSPYDPTSGFTIFWDFLHVPT
TTDQSENNKYHISVTLYKGQNKVSETRNLPVLHQNNGNGLHERAFGFGND
ETTPGFVTISVKQVFPKCFPNEDISLIVSLQITKNDVIHNNDGFQDNDQP
MRSLQMGEYGWCKLTLFDSFNRVTCGR
Run BLAST on NCBI

transcript from alignment at sc0003407:82..8024+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042413 ID=TCONS_00042413|Name=TCONS_00042413|organism=Clytia hemisphaerica|type=transcript|length=7943bp|location=Sequence derived from alignment at sc0003407:82..8024+ (Clytia hemisphaerica)
TTTTAGTTGGCACAACTCTTGAACAATTACAAAATCAATTGAAGAAATTC GAAGATAAGAACCAATATCTGGAAGATGAAATCAATCACCTTAAACGGAC ACAACAAGTGTCAAATAAtcaaaatcagaaatcaaatgCACAGGTATATA TGTTGTCTGTAAACAGTTCCAATATCTACggaaattatcaaaattcaaaa ctctCTGTACTTACTACACTACGTTATACTCTTTAGTACACGAAGTAAGG TATATGTTACAGAAGAGTTTTCTTACTCAGAAATCTTATTTTTAGATCTT TCATAGAATCCAATCCCCTAAGGTCAGATAGGGCGAGggctaaattttct tttcttttctatgcttttattgtttgaaatcttttttcaatactGGGGGT TATTTCGATAGGGGATGGGGTACGTTTTGAGTAATCAAACTGGGGGCTGT GCTAACAATTCAAATAATTTTCTTATATACTAGTatgcaaatttaaaaat taatttagcTTGCCCTTATGTGATATACATCTTCttttaataagcaactc caattcaCAGGGCTGCCGCTTAGCATTcttgctcattttctgaaaaattt gctttgacccCTAATATTATACCATTTTTATGCTTATTCGGTCAAGGGCT GTCGTTTGCCATGcttaaattatctaaaaaagCTTTTCGAGATAGCGAAA ACAATGGGCTAATTTCAGGACTCGAGCCTTAACAacgtggttgcttataa aaaatgtgtaatgtATCATGGAGATATATGGTAATAGGAAAAAACTTTAT TACATTTAAGTgacctttttgatttttttgtttttgagaacTTTCGTCAA CTAATTTTTGATCTTACGTTTCGTGGAGATGAGGGCTACATCCTTAAAAT TTAACTGGGGGCTATTTTCACTAGCCCCTCCCCCCGAAAATTGACGGGAA CTAGACCCCCTTCGTCATGTTATGTTAGTCCGTTGAGTACTTATTAGACT ACTTAATCAAACTTAGTAAATATGTTATTGCATTTCAATGGAAATTAGGT CTAGTAAACATTTTTCACACAATATTTTACATAAACTTTCTAGGAAAATG TTGAATCGACATTGCATCCTTTTGGCTTTCACCAAGGTAACGACAATGTT TAATTTATCAATTGGGattctttcaataaaatagaaaaaactgtCTAAAA TTCCTAGGTTATTACTGTGCTATCCACCTCTAACTATCGACCCTATCTAT CTNAACTATGTTTAATTCATCAATTAGGattctttcaataaaatagaaaa aactgtCTAAAATTCCTAGGTTATTACTGTGCTATCCACCTCTAACTATC GACCCTATCTATCTATCATTCCTCTAACTTCTACTATAGGGCACTTGCAT AATGATCATGTACCAATGATAAATCACCACAAAGGTGATTTTCACGAACA GAGGCTAATGNTAGGGCACTTGCAGAATGATCATGTACCAATGATAAATC ACCACAAAGGTGATTTTCACGAACAGAGGCTAATGGGAATTCGTCAAGAA ACGGAATATTATCGCCAACAACTTGAGCTTGAACAGCTAAGACAGGTAAA CTAAGCCTGTAAAAAGAAAACTCAACTTAGAAAGAAGCTCTTTGTCACTT TATATTGATAACAAATTGAACTTGCATTTAGAAATTACTTTTTTTGCCAA CTCTTTGTTGAGCCACTCCTAAGAGAAGTACTTGGTCATACAATAAAAAT GTATATTATGGGTGTTAGGAGCAGTACAGGCTAATCTTATTAGATTGTTT gttaaaaatactcaaaatattTCCTCTTCTCAaacaacttttattttatt tataccGATTTGATTTACAGCAACTTCACAATCTGAGAGGACATCCTAAC CATCCGGTTCTTCCATCAATCGGAACAACAATAACAGCCAACCATTATCC TACACAGCAACAACATCCGCAACAGCATCCTTGGCAACAACACATACCAT TAATGGTGGCCAATAATCAACATTTTAATGAGGTACCTTCTTtcaagtgg attaatttttgacTTGGACTTTTTACTAGCGAATGGAGGATCTGAAGTTC TAACGTAGattaaattatgtaaaataagctctagtttagatggCTATCTA TCTACCCTGTCTATTACACCTATCGTTACTTGCAGCGCGCTCAGGGACTG GTAACGAAAATAAAAGGCAAATTCTTTTCAACGACGGTATCGAAAACACA AGTGTGGAGCGCAGTTGTGAAAAATGTAAGCTTTAGTTTAGACAGCCGAC TTGTCTAACTTAATTGCTAGAACAGGCAAAAAGTGGGTAGAATTGCAGTT AATATCCTcccttgaaaatttttgaaataggccatttgcattgacgtcaa aagaaagCCAATTCTCTACTCAATTCACATTTAGAGCATACAAGGTAAAA GCCCTCTAAACCAGATAGAGCTAAACCAGATAGAGCTAAACCTTTGTTCA ATcaatcattcattcattcattcattccctAGAGGCTTTGGCTAGTATTT GAATCTTAGATCTTTCGCGAAGACTAATTTTGTGCGAAAATGGCCAAATG ATTGGCCAAAATCGCAAAACGATGATAGGTTGATAGGTTGATAGGCGTGG CTGTTTCGTTCTTAAAGCgaaccgtagtgcagtggtagagcatccggcta cggttcgcaaggttgtgggttcaatccccagcccggtcataccaaagatt tccaaaatggtacttgaagcctctctgcttgatgctcagcaattaagaga aggatcaagggtaagtgaagAAATCCatggagaaagagtggcgccctccc ctaccttcgggtagatagctatcgaaagaggagccatcGGGTCGCccccg actgcggtcgcagacctACTTATTTACTTAAAGCGACAGAATTGAAGGTC GTGAAGAGGAGGGAGTAGACGTATTTAGAGGGAAGTGATAAGGGTTAACA GTACTGGAGGGTCAGTACTTAAAGCGACAGAATTGAGAGCGACAGAATTG AAGGTCGTGAAGGGGAGGGAGTAGACGTATTTAGAGGGAAGTGATGAGGG TTAACAGTACTGGAGGGTCAACAGTACTGGAGAGTCAGGCTCAAGAATGC ATATTACTTAAATATGGACAAAGTATGGCGAAACTCTATTCGAACTGTTA TACAACAGAAATGTTTTTCTAATGGGGCTAAATCAGTATCTCCCACCTCC TATCTCCTACAAAGCTACTGGAATATATTGCGTAACAGGGGAAGGAATCA GACTCCTTGAATACTTGCGTTCCCAAAAAATTGCCAACTTTAATGAGCTT GATTGTAGAATATAccttttacagaatttcaaattaAAGTTGAATCTCaa actttatattttgatatatttttaaaaaaatttctttagatttcaACGGA GAACAATTTGTATTCAATGACACTTCATAAACGAGAAGAAGTATTCGAGA AAAGTCCCTACGATCCAACGTAGGTTTGAATTATTTGCCGtacgctctct aattcggttttcagggggggggggttgggtttcattgaataagggagcgc gtatcgaatagtagaacgtcgaatagatcttatcggagtttttgattttt ctaaaaaagcgatgcattgatTATGGGATTTCGGGAGtgttacaatagaa ttccctcgagaaattcataagagatttctattgtaatactcccaaaacaa tcccacaatgcatcggtcaaaatccgccaaattaagttcccgccaaatta aatttttcaagttaaccgccAAATTAGATTCCCGCTAAATTTATGTTGCT CTATTTTAtcccccaaatgtgtgctatttcaggctttaaaacaggttttc cttttttaatggcgttttttggacaaaaatgtccttcgtccgccaaattt aattcccaccaaatttaatttttcaagttaaccgccaaattaaattcccg ccaaaatttcttcctttaatgtacaTTCCATTTCAGATCTGGGTTCACAA TCTTCTGGGATTTTCTGCACGTGCCAACCACAACTGACCAATCAGAAAAC AACAAGTACCATATCTCAGTAACTCTTTACAAAGGACAAAATAAAGTCTC TGAGACAAGAAACCTACCAGTTCTACATCAAAACAATGGGAATGGATTAC ATGAACGTGCTTTTGGATTTGGTAATGATGAAACAACTCCAGGATTTGTG ACGATAAGTGTGAAACAAGTTTTCCCCAAGTGAGTAATACCGTAGTGTCA TTACAAGCGATCTTGacaaacaaataaaatggaaggtTCCAGTAAAACGA ACGACATTGAATGTTCTTGAACGTTCCTGAACATTTCTGATCATTCCCTT TTATTTACTAGTTTAAGAATGTCTTAGAACATTCGAGAACGTTCCCAAAC GTTTCCAAACGTCTTTATTGAGTCAAGCATTAACCTTTGGACGCAAAGGA TCGTTCGCCAGCATTAAACGTTCTGAAACGTTACTGGACGATCTGGTTCT GAAAGTTCTAAGAATTCTATGGAACGTTCAGTTACGTCTCAAAAACGCTC CATTTTATTTGTACTAAAAATCGCGTGTAATGACACTAATGGTAATGTCG ACATCTGGGAATAAGCTTGCAGCAGTATAGAGCGTGCATTGGGAActtta attcttataatttttttctcacaaaatttAGCCTCAGTCTGCGCATTAGT CTTACTTTCCATgggttttcaaaaaattttccccttCGCTTCTATATATT CTGGGTACAGtacttttatatattttttaagctTAGCCTACTTCTTTTGG CGGGAGATATCGAGTCAAACCCGGGCCCGTGAGAGAAAGATAACACCTTA TCAATTTCACATTGGAATCTAAACAGCGTTTGggttaataaattttcaaa gattgctcAAATTACTGCCTTTCTGACTGCTCATAAGTTTGATATCTTCT GTGTCGGTGAGTCGTTTCTCGATTCCTCTATCGAGAGTGATGATTCGAGG TTGAAGATAGAAAATTATGAGCTACTCAGATGTGACCACCCATCTAACTC TAAAATAGGTGGTGTTTGTCTTTATTATAGAAGGGGTCTTTCTGTTGAGA GAAGGCCTGAGNAATTTCTCATTGGAATCTAAACAACGTTTGggttaata aattttcaaagatttctcaAATCACTGCCTTTCTGAGTGCTCACAAGTTT GATATCTTCTGCGTCGGTGAGTCTTTTCTTGACTCCTCTATCGAGAGTGA TGATTTGAGGTTAAAGATAGAAAATTATGAGCTACTCAGATGTGACCACC CATCTAACTCTAAAATGGGTGGTGTAACTTGTCTTTATTATAGGAAGGGT TTTTCTGTTGAGAGAAGACCCGAGTTGTTTTCTCTTGACGAGTGCCTTGT TTGTGAAGTAAGATATGGTTcgaaaaaacttcttctttgtcttctcTACC GGACTCCTAAAATAGTCAAAATGCAGACGAATTTTTTGCATTTAAACAAA AATGGGaggaaacaatcaaaaacatttaTGACGTTTCTCCCACTCTATCT ATTTTTCTTGGTGATTTCAACGCAAGAAATTCAGTATGGTGGACTGGTGA TGTCACAAATTCTCAAGGAGAGGACATTAACGAATTAGCCCCGCAGTATG GGTTACATCAACTGATTGACGAGCCAACTCACTTGAAGCCTGGGTGCTCT CCATCCTGtatagatcttattttttcatcttcgcgaACACCTATTTTAGA ATCTGGGGTTTTACCTTCCCCCAAGTCCCGTTGTCACCACCAGATACCTT TTGTTAGAATAAACTATCAAATTAAACTATCACGTCAAATACTTTTTCGC ATCAAGACGTCTTTTTTTAAGCTGGCGAATCTCGCAAGGAAAATGGagga aaaaatcgatgaaaatgaccaagaaTTGCCGCTTGAAAATAGGTTTGCAC CCAACAAAATACATTATTAGAgaaggaacaacaacaaaaGACACTCTGAC CTGCAGGAAGTGCCATCGAGATGTTCATTATAACTGTTCCCAGCTACCAA TCTACCAAATACAGATTTGCTTAACGTTTAAATCTAGAAGTTTCCAATGT CAAAGTTACGTTAAGATCTCACCAGAGCTGATGGAACGAGTTGAAACATG CAGAAACACCAAAATCGAGGGACttcaaaaggaaattaaagCATGTGAAA ACAGCATGAAAgttcaaaatgaagaaatctCCCAACTGAAATCAAAGACC TCAAcgttatttacaaaaaaaaatcaaagaaagcctGGAAACAAAGATGA CCATACTCGAGAAGAAGATAGAAACAAATAATCGAAAAGAAGCAAGAGCT GAAAGAGGTTAGTTATGCTGAAGCTGTATCCAAACAGATAAATCAACGAT CAAATAAGGTGGAGAAAATGGCTCGAAGTGAAACAGTCGGCAAACAACGA TCCACGGCATGCAATCTAATTTTCCATggaatcaaagaaaatttggagGA TCCCGAAAATACAACGAAAATCTACGACGAGAAATTTATCAAGTGCAGAA TCCTTGGATTACAACTGGGTATCAAGGACATAAAAATTGTAAACACACAG AGGATTGGAGTATTCACGGAAGAGAGAGAGGAAGAAGGGAGGTATCGACC AATCAAGGTAGTTTTCGAAAATGAAGAAGACAAGAACAAAGTCTTGAGAA CCATCACGACATACAAAGGCCCTCCTTCATCCTATCGAGCAACAGAAGAC CTCACAATTATTGAACGATTGACAATCAAAGAATTTAGCAAGAAAGCACG CGAGCTCaatgctcaaatgaaagacaaaacTATTCAATTTAAAGTCAGGG GAAGCTCCAAAACAAAATCATACCTAAAGAAAACTGTAACAACAAGCGTT TGTAAAAAGATAGGTTCTTAGAGGCCCACGGCGCGCCTTGAACCTCaatc ctttaataaataaataaataaattccctCCAGCTTATAAACgctaattta ttttatttattcattctAATTCTTACCAACCGATCTTTATTCACGCTATA AACTAAACTATGTTTGCCATCTTTATTGAAGTTTCCCATGTGACAAATGT AGTTTTCCCTCAAGTAAGTATTAAACGAGATTTTGACTTCAGTTCATACC GATTCATCTCTTTTCAAACCCTGTAAACTAAgatatatctgccatctttg atttgaaTATTCCTTGTGACTTATGTAGTACGGTTTGACTTTGAGCAAAG TTATGGTAGCAGTAAAGCAGCTCCTTTTCGTAACATTTTAGCGATGGTTT TCCCTACTTATTTACAAAATTAGCCTgtgtaaaatttttaaatgtcTTTG CAAAGTTTTGCCTCATTTTGACCGGGTTAAACAATTTtgacatttattga caaaaaactCTCGGGATGTACATATGATTTTAATAAAGTCCATAATGTAA CATAGCCGGGTAACTTAACCAAAGcatatcaatttttattttaaaacatg TTTCGATATTTCATTATACATATGATTTTAGGAGACCTTGTCAGGGAATT TCAAATCAAAGGCGTTAAAAATTCAAACTCGCATTTTTGAATCCGACAGG TGTTTTCCAAACGAGGACATATCACTGATCGTGTCATTACAAATCacgaa aaatgacgtcattcataACAATGATGGTTTCCAAGACAACGATCAACCAA TGAGATCATTACAAATGGGAGAATATGGTTGGTGCAAATTGACGCTTTTT GATTCGTTCAATAGAGTCACGTGTGGAAGGTAATATTTCATGAAACAGTG CAGTCCCAGCTggaacacaacgttgtttcgacgttcacctaacgttatat ggacgttgtgaacattagatgaacgttgaaacgacgttgtgtg

Coding sequence (CDS) from alignment at sc0003407:82..8024+

>TCONS_00042413 ID=TCONS_00042413|Name=TCONS_00042413|organism=Clytia hemisphaerica|type=CDS|length=7872bp|location=Sequence derived from alignment at sc0003407:82..8024+ (Clytia hemisphaerica)
TTAGTTGGCACAACTCTTGAACAATTACAAAATCAATTGAAGAAATTCGA
AGATAAGAACCAATATCTGGAAGATGAAATCAATCACCTTAAACGGACAC
AACAAGTGTCAAATAAtcaaaatcagaaatcaaatgCACAGGAAAATGTT
GAATCGACATTGCATCCTTTTGGCTTTCACCAAGGGCACTTGCATAATGA
TCATGTACCAATGATAAATCACCACAAAGGTGATTTTCACGAACAGAGGC
TAATGGGAATTCGTCAAGAAACGGAATATTATCGCCAACAACTTGAGCTT
GAACAGCTAAGACAGCAACTTCACAATCTGAGAGGACATCCTAACCATCC
GGTTCTTCCATCAATCGGAACAACAATAACAGCCAACCATTATCCTACAC
AGCAACAACATCCGCAACAGCATCCTTGGCAACAACACATACCATTAATG
GTGGCCAATAATCAACATTTTAATGAGatttcaACGGAGAACAATTTGTA
TTCAATGACACTTCATAAACGAGAAGAAGTATTCGAGAAAAGTCCCTACG
ATCCAACATCTGGGTTCACAATCTTCTGGGATTTTCTGCACGTGCCAACC
ACAACTGACCAATCAGAAAACAACAAGTACCATATCTCAGTAACTCTTTA
CAAAGGACAAAATAAAGTCTCTGAGACAAGAAACCTACCAGTTCTACATC
AAAACAATGGGAATGGATTACATGAACGTGCTTTTGGATTTGGTAATGAT
GAAACAACTCCAGGATTTGTGACGATAAGTGTGAAACAAGTTTTCCCCAA
GTGTTTTCCAAACGAGGACATATCACTGATCGTGTCATTACAAATCacga
aaaatgacgtcattcataACAATGATGGTTTCCAAGACAACGATCAACCA
ATGAGATCATTACAAATGGGAGAATATGGTTGGTGCAAATTGACGCTTTT
TGATTCGTTCAATAGAGTCACGTGTGGAAGGTAATTAGTTGGCACAACTC
TTGAACAATTACAAAATCAATTGAAGAAATTCGAAGATAAGAACCAATAT
CTGGAAGATGAAATCAATCACCTTAAACGGACACAACAAGTGTCAAATAA
tcaaaatcagaaatcaaatgCACAGGAAAATGTTGAATCGACATTGCATC
CTTTTGGCTTTCACCAAGGGCACTTGCATAATGATCATGTACCAATGATA
AATCACCACAAAGGTGATTTTCACGAACAGAGGCTAATGGGAATTCGTCA
AGAAACGGAATATTATCGCCAACAACTTGAGCTTGAACAGCTAAGACAGC
AACTTCACAATCTGAGAGGACATCCTAACCATCCGGTTCTTCCATCAATC
GGAACAACAATAACAGCCAACCATTATCCTACACAGCAACAACATCCGCA
ACAGCATCCTTGGCAACAACACATACCATTAATGGTGGCCAATAATCAAC
ATTTTAATGAGatttcaACGGAGAACAATTTGTATTCAATGACACTTCAT
AAACGAGAAGAAGTATTCGAGAAAAGTCCCTACGATCCAACATCTGGGTT
CACAATCTTCTGGGATTTTCTGCACGTGCCAACCACAACTGACCAATCAG
AAAACAACAAGTACCATATCTCAGTAACTCTTTACAAAGGACAAAATAAA
GTCTCTGAGACAAGAAACCTACCAGTTCTACATCAAAACAATGGGAATGG
ATTACATGAACGTGCTTTTGGATTTGGTAATGATGAAACAACTCCAGGAT
TTGTGACGATAAGTGTGAAACAAGTTTTCCCCAAGTGTTTTCCAAACGAG
GACATATCACTGATCGTGTCATTACAAATCacgaaaaatgacgtcattca
taACAATGATGGTTTCCAAGACAACGATCAACCAATGAGATCATTACAAA
TGGGAGAATATGGTTGGTGCAAATTGACGCTTTTTGATTCGTTCAATAGA
GTCACGTGTGGAAGGTAATTAGTTGGCACAACTCTTGAACAATTACAAAA
TCAATTGAAGAAATTCGAAGATAAGAACCAATATCTGGAAGATGAAATCA
ATCACCTTAAACGGACACAACAAGTGTCAAATAAtcaaaatcagaaatca
aatgCACAGGAAAATGTTGAATCGACATTGCATCCTTTTGGCTTTCACCA
AGGGCACTTGCATAATGATCATGTACCAATGATAAATCACCACAAAGGTG
ATTTTCACGAACAGAGGCTAATGGGAATTCGTCAAGAAACGGAATATTAT
CGCCAACAACTTGAGCTTGAACAGCTAAGACAGCAACTTCACAATCTGAG
AGGACATCCTAACCATCCGGTTCTTCCATCAATCGGAACAACAATAACAG
CCAACCATTATCCTACACAGCAACAACATCCGCAACAGCATCCTTGGCAA
CAACACATACCATTAATGGTGGCCAATAATCAACATTTTAATGAGatttc
aACGGAGAACAATTTGTATTCAATGACACTTCATAAACGAGAAGAAGTAT
TCGAGAAAAGTCCCTACGATCCAACATCTGGGTTCACAATCTTCTGGGAT
TTTCTGCACGTGCCAACCACAACTGACCAATCAGAAAACAACAAGTACCA
TATCTCAGTAACTCTTTACAAAGGACAAAATAAAGTCTCTGAGACAAGAA
ACCTACCAGTTCTACATCAAAACAATGGGAATGGATTACATGAACGTGCT
TTTGGATTTGGTAATGATGAAACAACTCCAGGATTTGTGACGATAAGTGT
GAAACAAGTTTTCCCCAAGTGTTTTCCAAACGAGGACATATCACTGATCG
TGTCATTACAAATCacgaaaaatgacgtcattcataACAATGATGGTTTC
CAAGACAACGATCAACCAATGAGATCATTACAAATGGGAGAATATGGTTG
GTGCAAATTGACGCTTTTTGATTCGTTCAATAGAGTCACGTGTGGAAGGT
AATTAGTTGGCACAACTCTTGAACAATTACAAAATCAATTGAAGAAATTC
GAAGATAAGAACCAATATCTGGAAGATGAAATCAATCACCTTAAACGGAC
ACAACAAGTGTCAAATAAtcaaaatcagaaatcaaatgCACAGGAAAATG
TTGAATCGACATTGCATCCTTTTGGCTTTCACCAAGGGCACTTGCATAAT
GATCATGTACCAATGATAAATCACCACAAAGGTGATTTTCACGAACAGAG
GCTAATGGGAATTCGTCAAGAAACGGAATATTATCGCCAACAACTTGAGC
TTGAACAGCTAAGACAGCAACTTCACAATCTGAGAGGACATCCTAACCAT
CCGGTTCTTCCATCAATCGGAACAACAATAACAGCCAACCATTATCCTAC
ACAGCAACAACATCCGCAACAGCATCCTTGGCAACAACACATACCATTAA
TGGTGGCCAATAATCAACATTTTAATGAGatttcaACGGAGAACAATTTG
TATTCAATGACACTTCATAAACGAGAAGAAGTATTCGAGAAAAGTCCCTA
CGATCCAACATCTGGGTTCACAATCTTCTGGGATTTTCTGCACGTGCCAA
CCACAACTGACCAATCAGAAAACAACAAGTACCATATCTCAGTAACTCTT
TACAAAGGACAAAATAAAGTCTCTGAGACAAGAAACCTACCAGTTCTACA
TCAAAACAATGGGAATGGATTACATGAACGTGCTTTTGGATTTGGTAATG
ATGAAACAACTCCAGGATTTGTGACGATAAGTGTGAAACAAGTTTTCCCC
AAGTGTTTTCCAAACGAGGACATATCACTGATCGTGTCATTACAAATCac
gaaaaatgacgtcattcataACAATGATGGTTTCCAAGACAACGATCAAC
CAATGAGATCATTACAAATGGGAGAATATGGTTGGTGCAAATTGACGCTT
TTTGATTCGTTCAATAGAGTCACGTGTGGAAGGTAATTAGTTGGCACAAC
TCTTGAACAATTACAAAATCAATTGAAGAAATTCGAAGATAAGAACCAAT
ATCTGGAAGATGAAATCAATCACCTTAAACGGACACAACAAGTGTCAAAT
AAtcaaaatcagaaatcaaatgCACAGGAAAATGTTGAATCGACATTGCA
TCCTTTTGGCTTTCACCAAGGGCACTTGCATAATGATCATGTACCAATGA
TAAATCACCACAAAGGTGATTTTCACGAACAGAGGCTAATGGGAATTCGT
CAAGAAACGGAATATTATCGCCAACAACTTGAGCTTGAACAGCTAAGACA
GCAACTTCACAATCTGAGAGGACATCCTAACCATCCGGTTCTTCCATCAA
TCGGAACAACAATAACAGCCAACCATTATCCTACACAGCAACAACATCCG
CAACAGCATCCTTGGCAACAACACATACCATTAATGGTGGCCAATAATCA
ACATTTTAATGAGatttcaACGGAGAACAATTTGTATTCAATGACACTTC
ATAAACGAGAAGAAGTATTCGAGAAAAGTCCCTACGATCCAACATCTGGG
TTCACAATCTTCTGGGATTTTCTGCACGTGCCAACCACAACTGACCAATC
AGAAAACAACAAGTACCATATCTCAGTAACTCTTTACAAAGGACAAAATA
AAGTCTCTGAGACAAGAAACCTACCAGTTCTACATCAAAACAATGGGAAT
GGATTACATGAACGTGCTTTTGGATTTGGTAATGATGAAACAACTCCAGG
ATTTGTGACGATAAGTGTGAAACAAGTTTTCCCCAAGTGTTTTCCAAACG
AGGACATATCACTGATCGTGTCATTACAAATCacgaaaaatgacgtcatt
cataACAATGATGGTTTCCAAGACAACGATCAACCAATGAGATCATTACA
AATGGGAGAATATGGTTGGTGCAAATTGACGCTTTTTGATTCGTTCAATA
GAGTCACGTGTGGAAGGTAATTAGTTGGCACAACTCTTGAACAATTACAA
AATCAATTGAAGAAATTCGAAGATAAGAACCAATATCTGGAAGATGAAAT
CAATCACCTTAAACGGACACAACAAGTGTCAAATAAtcaaaatcagaaat
caaatgCACAGGAAAATGTTGAATCGACATTGCATCCTTTTGGCTTTCAC
CAAGGGCACTTGCATAATGATCATGTACCAATGATAAATCACCACAAAGG
TGATTTTCACGAACAGAGGCTAATGGGAATTCGTCAAGAAACGGAATATT
ATCGCCAACAACTTGAGCTTGAACAGCTAAGACAGCAACTTCACAATCTG
AGAGGACATCCTAACCATCCGGTTCTTCCATCAATCGGAACAACAATAAC
AGCCAACCATTATCCTACACAGCAACAACATCCGCAACAGCATCCTTGGC
AACAACACATACCATTAATGGTGGCCAATAATCAACATTTTAATGAGatt
tcaACGGAGAACAATTTGTATTCAATGACACTTCATAAACGAGAAGAAGT
ATTCGAGAAAAGTCCCTACGATCCAACATCTGGGTTCACAATCTTCTGGG
ATTTTCTGCACGTGCCAACCACAACTGACCAATCAGAAAACAACAAGTAC
CATATCTCAGTAACTCTTTACAAAGGACAAAATAAAGTCTCTGAGACAAG
AAACCTACCAGTTCTACATCAAAACAATGGGAATGGATTACATGAACGTG
CTTTTGGATTTGGTAATGATGAAACAACTCCAGGATTTGTGACGATAAGT
GTGAAACAAGTTTTCCCCAAGTGTTTTCCAAACGAGGACATATCACTGAT
CGTGTCATTACAAATCacgaaaaatgacgtcattcataACAATGATGGTT
TCCAAGACAACGATCAACCAATGAGATCATTACAAATGGGAGAATATGGT
TGGTGCAAATTGACGCTTTTTGATTCGTTCAATAGAGTCACGTGTGGAAG
GTAATTAGTTGGCACAACTCTTGAACAATTACAAAATCAATTGAAGAAAT
TCGAAGATAAGAACCAATATCTGGAAGATGAAATCAATCACCTTAAACGG
ACACAACAAGTGTCAAATAAtcaaaatcagaaatcaaatgCACAGGAAAA
TGTTGAATCGACATTGCATCCTTTTGGCTTTCACCAAGGGCACTTGCATA
ATGATCATGTACCAATGATAAATCACCACAAAGGTGATTTTCACGAACAG
AGGCTAATGGGAATTCGTCAAGAAACGGAATATTATCGCCAACAACTTGA
GCTTGAACAGCTAAGACAGCAACTTCACAATCTGAGAGGACATCCTAACC
ATCCGGTTCTTCCATCAATCGGAACAACAATAACAGCCAACCATTATCCT
ACACAGCAACAACATCCGCAACAGCATCCTTGGCAACAACACATACCATT
AATGGTGGCCAATAATCAACATTTTAATGAGatttcaACGGAGAACAATT
TGTATTCAATGACACTTCATAAACGAGAAGAAGTATTCGAGAAAAGTCCC
TACGATCCAACATCTGGGTTCACAATCTTCTGGGATTTTCTGCACGTGCC
AACCACAACTGACCAATCAGAAAACAACAAGTACCATATCTCAGTAACTC
TTTACAAAGGACAAAATAAAGTCTCTGAGACAAGAAACCTACCAGTTCTA
CATCAAAACAATGGGAATGGATTACATGAACGTGCTTTTGGATTTGGTAA
TGATGAAACAACTCCAGGATTTGTGACGATAAGTGTGAAACAAGTTTTCC
CCAAGTGTTTTCCAAACGAGGACATATCACTGATCGTGTCATTACAAATC
acgaaaaatgacgtcattcataACAATGATGGTTTCCAAGACAACGATCA
ACCAATGAGATCATTACAAATGGGAGAATATGGTTGGTGCAAATTGACGC
TTTTTGATTCGTTCAATAGAGTCACGTGTGGAAGGTAATTAGTTGGCACA
ACTCTTGAACAATTACAAAATCAATTGAAGAAATTCGAAGATAAGAACCA
ATATCTGGAAGATGAAATCAATCACCTTAAACGGACACAACAAGTGTCAA
ATAAtcaaaatcagaaatcaaatgCACAGGAAAATGTTGAATCGACATTG
CATCCTTTTGGCTTTCACCAAGGGCACTTGCATAATGATCATGTACCAAT
GATAAATCACCACAAAGGTGATTTTCACGAACAGAGGCTAATGGGAATTC
GTCAAGAAACGGAATATTATCGCCAACAACTTGAGCTTGAACAGCTAAGA
CAGCAACTTCACAATCTGAGAGGACATCCTAACCATCCGGTTCTTCCATC
AATCGGAACAACAATAACAGCCAACCATTATCCTACACAGCAACAACATC
CGCAACAGCATCCTTGGCAACAACACATACCATTAATGGTGGCCAATAAT
CAACATTTTAATGAGatttcaACGGAGAACAATTTGTATTCAATGACACT
TCATAAACGAGAAGAAGTATTCGAGAAAAGTCCCTACGATCCAACATCTG
GGTTCACAATCTTCTGGGATTTTCTGCACGTGCCAACCACAACTGACCAA
TCAGAAAACAACAAGTACCATATCTCAGTAACTCTTTACAAAGGACAAAA
TAAAGTCTCTGAGACAAGAAACCTACCAGTTCTACATCAAAACAATGGGA
ATGGATTACATGAACGTGCTTTTGGATTTGGTAATGATGAAACAACTCCA
GGATTTGTGACGATAAGTGTGAAACAAGTTTTCCCCAAGTGTTTTCCAAA
CGAGGACATATCACTGATCGTGTCATTACAAATCacgaaaaatgacgtca
ttcataACAATGATGGTTTCCAAGACAACGATCAACCAATGAGATCATTA
CAAATGGGAGAATATGGTTGGTGCAAATTGACGCTTTTTGATTCGTTCAA
TAGAGTCACGTGTGGAAGGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026255XLOC_026255Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042413-exon-sc0003407-1491911889:82..224TCONS_00042413-exon-sc0003407-1491911889:82..224Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1510915933:82..224TCONS_00042413-exon-sc0003407-1510915933:82..224Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1575043694:82..224TCONS_00042413-exon-sc0003407-1575043694:82..224Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1491911889:1175..1217TCONS_00042413-exon-sc0003407-1491911889:1175..1217Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1510915933:1175..1217TCONS_00042413-exon-sc0003407-1510915933:1175..1217Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1575043694:1175..1217TCONS_00042413-exon-sc0003407-1575043694:1175..1217Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1491911889:1471..1515TCONS_00042413-exon-sc0003407-1491911889:1471..1515Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1510915933:1471..1515TCONS_00042413-exon-sc0003407-1510915933:1471..1515Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1575043694:1471..1515TCONS_00042413-exon-sc0003407-1575043694:1471..1515Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1491911889:1591..1676TCONS_00042413-exon-sc0003407-1491911889:1591..1676Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1510915933:1591..1676TCONS_00042413-exon-sc0003407-1510915933:1591..1676Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1575043694:1591..1676TCONS_00042413-exon-sc0003407-1575043694:1591..1676Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1491911889:1952..2113TCONS_00042413-exon-sc0003407-1491911889:1952..2113Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1510915933:1952..2113TCONS_00042413-exon-sc0003407-1510915933:1952..2113Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1575043694:1952..2113TCONS_00042413-exon-sc0003407-1575043694:1952..2113Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1491911889:3521..3600TCONS_00042413-exon-sc0003407-1491911889:3521..3600Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1510915933:3521..3600TCONS_00042413-exon-sc0003407-1510915933:3521..3600Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1575043694:3521..3600TCONS_00042413-exon-sc0003407-1575043694:3521..3600Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1491911889:4118..4360TCONS_00042413-exon-sc0003407-1491911889:4118..4360Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1510915933:4118..4360TCONS_00042413-exon-sc0003407-1510915933:4118..4360Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1575043694:4118..4360TCONS_00042413-exon-sc0003407-1575043694:4118..4360Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1491911889:7731..8024TCONS_00042413-exon-sc0003407-1491911889:7731..8024Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1510915933:7731..8024TCONS_00042413-exon-sc0003407-1510915933:7731..8024Clytia hemisphaericaexon
TCONS_00042413-exon-sc0003407-1575043694:7731..8024TCONS_00042413-exon-sc0003407-1575043694:7731..8024Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042413-proteinTCONS_00042413-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003407supercontigsc0003407:82..8024 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.510735 0.549257 0 0.332298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.425182 0 0.505105 0.594177 0.222581 0.598119 0 0 0.634713 0 0 0.361844
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042413 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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