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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042377 ID=TCONS_00042377|Name=TCONS_00042377|organism=Clytia hemisphaerica|type=transcript|length=1388bp
ttttagaTATGAAATATATCGATCATTGAGTGTACAATAAACCAAGTCAC
GAAGCACTATGCACTCATACTACAAAAGATTAGTTTTTGTATCTCAATTT
TCTTGCCTATGTCTGCCCGATCATGAAAATATCtgacaaatgaaaatgta
aGTGGAAGTTAAGGTATCTGTCCATGAATTAAAGGAAAGTTTTGATAATA
AATAGAAACAACAAATGGAGTCAAACATTTTAATAAACTTTAATGAATTT
CTCatgttattttcttatttctttgtGTATTATTTAAAGAGTTAAACCAT
TCAAATGAGACAGAAATCCAGACAGTAGGCAATATATAAACATAATCATC
TTATGTTTAGCAAGAATATTCCTATGGCTAGTAAAACTTTGATGCAAAGC
CAAATTTTGAGGATGAATCTCACCCTGTCACCTGTAGTACACATGGCTGC
TTATGTTTCAAAAGTATTTACCTATATAGCTAtgagcaaaaagctcgtac
ccatgtCTTTTTTTAGCTGTTAAAACATAATAATTTAAGTTGTTTATAGG
AGATAATCTCCTCCTCTACAAAATCTAGGGAGCCACATGCTATATCCATA
ACATGTGTATCAAATCAAATCAGAAAGGAAATCATTTTGCTAATTGAAAG
ATAACCATCTTATAATCATTGGCACACTTCAACCGGGCTAACAAAGTCCA
GAAAAAGATAATACTATCAGACCTGCCGCCACATGCTCCAAGTTTTTAGC
ACCTCTGCTGACAGAGGTTCATGGTTAGTTCAGAACAATTCTCCTGGTCT
CATACATAATTGCAGTTAAAAAGTTCccgattttcaaagatttctgcAAC
AATGATAAAAATCTGCCAGAGAAGGTTGAAcgaatttacataattttgtc
ACATATCCAAAAGTAAGGCCATTGTGTTGTTGCTTACATANTTCTGCAAC
TATGATAAAAATCTGCCAGAGAAGGTTGAACGAATTTACATAATTTTCTC
ACATATCCAAAAGTAAGGCCATTGTGTTGTTGCTTACAtaattgtaaatt
ttcaaaaacacccccagatattcacacaAACAAGGAACAAGTGAGCAAAA
TTAaagccaaatctgaccatttttgaagtctccagtctGTCCCAAAGTTT
TATTGAGGTGACATACTGACTGACTAACagacacattctcagattctagc
tcaattgAAGTTGAGAACCAGTCCATAGTGGgcaacacccctccaacccc
cacctaaaAAAAGTCACCCCACCTGCATAGgcttacccccacctgaaaat
tgaAGACTACTCAACCCCCACCTTCTTGGGCAACCCTCACCTGATTTTAA
AAAATctcccaacccccacctgaaaaatccaatttcat Run BLAST on NCBI transcript from alignment at sc0003378:7390..8777 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042377 ID=TCONS_00042377|Name=TCONS_00042377|organism=Clytia hemisphaerica|type=transcript|length=1388bp|location=Sequence derived from alignment at sc0003378:7390..8777 (Clytia hemisphaerica)
atgaaattggatttttcaggtgggggttgggagATTTTTTAAAATCAGGT
GAGGGTTGCCCAAGAAGGTGGGGGTTGAGTAGTCTtcaattttcaggtgg
gggtaagcCTATGCAGGTGGGGTGACTTTTtttaggtgggggttggaggg
gtgttgcCCACTATGGACTGGTTCTCAACTTcaattgagctagaatctga
gaatgtgtctGTTAGTCAGTCAGTATGTCACCTCAATAAAACTTTGGGAC
agactggagacttcaaaaatggtcagatttggcttTAATTTTGCTCACTT
GTTCCTTGTTtgtgtgaatatctgggggtgtttttgaaaatttacaatta
TGTAAGCAACAACACAATGGCCTTACTTTTGGATATGTGAGAAAATTATG
TAAATTCGTTCAACCTTCTCTGGCAGATTTTTATCATAGTTGCAGAANTA
TGTAAGCAACAACACAATGGCCTTACTTTTGGATATGTgacaaaattatg
taaattcgTTCAACCTTCTCTGGCAGATTTTTATCATTGTTgcagaaatc
tttgaaaatcggGAACTTTTTAACTGCAATTATGTATGAGACCAGGAGAA
TTGTTCTGAACTAACCATGAACCTCTGTCAGCAGAGGTGCTAAAAACTTG
GAGCATGTGGCGGCAGGTCTGATAGTATTATCTTTTTCTGGACTTTGTTA
GCCCGGTTGAAGTGTGCCAATGATTATAAGATGGTTATCTTTCAATTAGC
AAAATGATTTCCTTTCTGATTTGATTTGATACACATGTTATGGATATAGC
ATGTGGCTCCCTAGATTTTGTAGAGGAGGAGATTATCTCCTATAAACAAC
TTAAATTATTATGTTTTAACAGCTAAAAAAAGacatgggtacgagctttt
tgctcaTAGCTATATAGGTAAATACTTTTGAAACATAAGCAGCCATGTGT
ACTACAGGTGACAGGGTGAGATTCATCCTCAAAATTTGGCTTTGCATCAA
AGTTTTACTAGCCATAGGAATATTCTTGCTAAACATAAGATGATTATGTT
TATATATTGCCTACTGTCTGGATTTCTGTCTCATTTGAATGGTTTAACTC
TTTAAATAATACacaaagaaataagaaaataacatGAGAAATTCATTAAA
GTTTATTAAAATGTTTGACTCCATTTGTTGTTTCTATTTATTATCAAAAC
TTTCCTTTAATTCATGGACAGATACCTTAACTTCCACttacattttcatt
tgtcaGATATTTTCATGATCGGGCAGACATAGGCAAGAAAATTGAGATAC
AAAAACTAATCTTTTGTAGTATGAGTGCATAGTGCTTCGTGACTTGGTTT
ATTGTACACTCAATGATCGATATATTTCATAtctaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042377-exon-sc0003378-1491911889:7390..8777 | TCONS_00042377-exon-sc0003378-1491911889:7390..8777 | Clytia hemisphaerica | exon |
| TCONS_00042377-exon-sc0003378-1510915933:7390..8777 | TCONS_00042377-exon-sc0003378-1510915933:7390..8777 | Clytia hemisphaerica | exon |
| TCONS_00042377-exon-sc0003378-1575043694:7390..8777 | TCONS_00042377-exon-sc0003378-1575043694:7390..8777 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003378 | supercontig | sc0003378:7390..8777 . |
Blast
The following BLAST results are available for this feature:
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