TCONS_00042376 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042376
Unique NameTCONS_00042376
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length180

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042376 ID=TCONS_00042376|Name=TCONS_00042376|organism=Clytia hemisphaerica|type=transcript|length=180bp
CTCTGTATCTTGCTGAAGAGCATCGCCATCATCATGTTCAGGTTCTAGAC
CAACAGTGACATCAACAGTCTGTTGTTCGTCATCACTTTCAATAACATCA
GCAACAATTATTACTTCATCTATTCCACTTTGTTGGCTGTTTGAGGAATC
AGTTTCTGGTTCACTTTCACTCTCACCAGC
Run BLAST on NCBI

transcript from alignment at sc0003378:3974..4153

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042376 ID=TCONS_00042376|Name=TCONS_00042376|organism=Clytia hemisphaerica|type=transcript|length=180bp|location=Sequence derived from alignment at sc0003378:3974..4153 (Clytia hemisphaerica)
GCTGGTGAGAGTGAAAGTGAACCAGAAACTGATTCCTCAAACAGCCAACA
AAGTGGAATAGATGAAGTAATAATTGTTGCTGATGTTATTGAAAGTGATG
ACGAACAACAGACTGTTGATGTCACTGTTGGTCTAGAACCTGAACATGAT
GATGGCGATGCTCTTCAGCAAGATACAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026220XLOC_026220Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042376-exon-sc0003378-1491911889:3974..4153TCONS_00042376-exon-sc0003378-1491911889:3974..4153Clytia hemisphaericaexon
TCONS_00042376-exon-sc0003378-1510915933:3974..4153TCONS_00042376-exon-sc0003378-1510915933:3974..4153Clytia hemisphaericaexon
TCONS_00042376-exon-sc0003378-1575043694:3974..4153TCONS_00042376-exon-sc0003378-1575043694:3974..4153Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003378supercontigsc0003378:3974..4153 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042376 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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