TCONS_00042367 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042367
Unique NameTCONS_00042367
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length205

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042367 ID=TCONS_00042367|Name=TCONS_00042367|organism=Clytia hemisphaerica|type=transcript|length=205bp
AGAAAAAGGATTATGCCTAACAACAATATTGATGATTCGCCAGTCAGAAA
GAAACCTGACTCTGAAAGTAGATCATGCAACAATACtctaaataagaaaa
tatatcaGAAACAATTGTCTACAACTCGACCTCGCCCAGTACCACAACAT
TCAGCGTATGGTTGTGAATCGGATGAAACGAACAAATCTCTTTTAGATGA
CCATC
Run BLAST on NCBI

transcript from alignment at sc0003373:673..1054-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042367 ID=TCONS_00042367|Name=TCONS_00042367|organism=Clytia hemisphaerica|type=transcript|length=382bp|location=Sequence derived from alignment at sc0003373:673..1054- (Clytia hemisphaerica)
AGAAAAAGGATTATGCCTAACAACAATATTGATGATTCGCCAGTCAGAAA
GAAACCTGACTCTGAAAGTAGATCATGTAAGTTTTAACTTTAACATTGGT
TCAATCTTTGTTGAAATCTTTGCAGTATATTTTGCCAAGCCCTGTTATGA
TGGAAAAAATTGTGAAATTGCAGAATTGTAGAGGGTTATTTTATTGCATT
AAGGTGCATTTGGAATCATGATAATAAATTCCGTAATATAATTGTGTTTT
CAGGCAACAATACTCTAAATAAGAAAATATATCAGAAACAATTGTCTACA
ACTCGACCTCGCCCAGTACCACAACATTCAGCGTATGGTTGTGAATCGGA
TGAAACGAACAAATCTCTTTTAGATGACCATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026212XLOC_026212Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042367-exon-sc0003373-1575043694:979..1054TCONS_00042367-exon-sc0003373-1575043694:979..1054Clytia hemisphaericaexon
TCONS_00042367-exon-sc0003373-1575043694:673..801TCONS_00042367-exon-sc0003373-1575043694:673..801Clytia hemisphaericaexon
TCONS_00042367-exon-sc0003373-1510915933:979..1054TCONS_00042367-exon-sc0003373-1510915933:979..1054Clytia hemisphaericaexon
TCONS_00042367-exon-sc0003373-1510915933:673..801TCONS_00042367-exon-sc0003373-1510915933:673..801Clytia hemisphaericaexon
TCONS_00042367-exon-sc0003373-1491911889:979..1054TCONS_00042367-exon-sc0003373-1491911889:979..1054Clytia hemisphaericaexon
TCONS_00042367-exon-sc0003373-1491911889:673..801TCONS_00042367-exon-sc0003373-1491911889:673..801Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003373supercontigsc0003373:673..1054 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042367 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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