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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042299 ID=TCONS_00042299|Name=TCONS_00042299|organism=Clytia hemisphaerica|type=transcript|length=951bp
TCATAATCTTTATCTATTGTTTTCGGCTTGGATCATCCGCCAAAATCGTC
TTACCCAACTCCTCTGTTGTTTTTTTCGGAGACATTGCGAAATGAGGTAG
GGTTGTTTTGATGAGTCGTCGCTTGAACCTAGCCAagtttctctctctct
ctttttctaaataatttgaaatatcgTATTTAATGAAAATCAAGATTAAT
ATTAAACTATATGTATATTACCTTACCTTAGAGAAGATCTTATTTTTAAA
AGacacaatttttagtttttaggtatttaaaatagctttaaaaatcCCAA
CAAATTTTAGGGACTTTGATATAATGTAAAGGTTGATGATTTGACAAATT
GATTATTCTTTAAGTAAGACTGTATTTAGAAAATGAGCCCTTCTAATTTT
AAGCCTGTCATTGAATTAGTATCTTTGTAATCCTATCTAATATTCTTGTT
AATCTGTCGCGAAGATCTATTATAGCCAAATGACTTTTgtctcaaaattt
catgttgTTTTGTATAAAAGCAATCAAAGTTGAGGTTCGTTTAAGGGGAG
GAGGCAGCCGGCCAGATGTCAAGCCTAGGGAAATCACGGCGTCATGCGAG
TTTCTTTGTTGGCATAACACCAAAAGGAAACGCTTTTGACAGATAGTGGC
GGACGTAACAAAAAGACGTTGCTTTTATGAAACTTTAAGAACTAGGAAGG
ATTTTTGTCTGGTTAACtctaatttattattttttccttttttttatgtG
TATTATTTGATGTTTGGTACCCTTAATTCCGTTAGCAGAcgtttcttgtt
ttgaaagtaaatTTACCTGTCTATTAAAAACAACTGGTAAAATTTGGCTG
AGACTCGACTCTTCTAActcatatttttaaaatcatcaGACTTGTAATAT
TCTTAAAGTGTTCTTGATACGCATTAGTTGCTATTCTCAAGTGCTTTAAA
G Run BLAST on NCBI transcript from alignment at sc0003334:10117..11067 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042299 ID=TCONS_00042299|Name=TCONS_00042299|organism=Clytia hemisphaerica|type=transcript|length=951bp|location=Sequence derived from alignment at sc0003334:10117..11067 (Clytia hemisphaerica)
CTTTAAAGCACTTGAGAATAGCAACTAATGCGTATCAAGAACACTTTAAG
AATATTACAAGTCtgatgattttaaaaatatgagTTAGAAGAGTCGAGTC
TCAGCCAAATTTTACCAGTTGTTTTTAATAGACAGGTAAatttactttca
aaacaagaaacgTCTGCTAACGGAATTAAGGGTACCAAACATCAAATAAT
ACacataaaaaaaaggaaaaaataataaattagaGTTAACCAGACAAAAA
TCCTTCCTAGTTCTTAAAGTTTCATAAAAGCAACGTCTTTTTGTTACGTC
CGCCACTATCTGTCAAAAGCGTTTCCTTTTGGTGTTATGCCAACAAAGAA
ACTCGCATGACGCCGTGATTTCCCTAGGCTTGACATCTGGCCGGCTGCCT
CCTCCCCTTAAACGAACCTCAACTTTGATTGCTTTTATACAAAAcaacat
gaaattttgagacAAAAGTCATTTGGCTATAATAGATCTTCGCGACAGAT
TAACAAGAATATTAGATAGGATTACAAAGATACTAATTCAATGACAGGCT
TAAAATTAGAAGGGCTCATTTTCTAAATACAGTCTTACTTAAAGAATAAT
CAATTTGTCAAATCATCAACCTTTACATTATATCAAAGTCCCTAAAATTT
GTTGGgatttttaaagctattttaaatacctaaaaactaaaaattgtgtC
TTTTAAAAATAAGATCTTCTCTAAGGTAAGGTAATATACATATAGTTTAA
TATTAATCTTGATTTTCATTAAATAcgatatttcaaattatttagaaaaa
gagagagagagaaactTGGCTAGGTTCAAGCGACGACTCATCAAAACAAC
CCTACCTCATTTCGCAATGTCTCCGAAAAAAACAACAGAGGAGTTGGGTA
AGACGATTTTGGCGGATGATCCAAGCCGAAAACAATAGATAAAGATTATG
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042299-exon-sc0003334-1491911889:10117..11067 | TCONS_00042299-exon-sc0003334-1491911889:10117..11067 | Clytia hemisphaerica | exon |
| TCONS_00042299-exon-sc0003334-1510915933:10117..11067 | TCONS_00042299-exon-sc0003334-1510915933:10117..11067 | Clytia hemisphaerica | exon |
| TCONS_00042299-exon-sc0003334-1575043694:10117..11067 | TCONS_00042299-exon-sc0003334-1575043694:10117..11067 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003334 | supercontig | sc0003334:10117..11067 . |
Blast
The following BLAST results are available for this feature:
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