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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042295 ID=TCONS_00042295|Name=TCONS_00042295|organism=Clytia hemisphaerica|type=transcript|length=1332bp
GATCGATGTGCTGGTTGTACCTTCAAGTTTCTAAAAGAAGAtatttattg
caaaaaatgtggtTCTCCACgtacaaaaacagaaaaacagaGAACAATGA
ACTTAAGTGAATTTGCAGATGCAAGAAAACGGAAACTCAATCAATCAAAC
AAACATGGTAATACCAAAATAGCCACTTCATCCTCCTCAACAACAATAAC
CGCTAGTAAAGCAGCAGCAAAGAATGTTGAAATTAATATTGGTATTGCTA
GTATTGAtgaaaaatcttctattttgaaGAAACGACAAGGGCGTATGAGC
CTCAGAGTTTTGGAAACCATTGATAGACATGATTTGTTAGATGCAGCAAT
CGAAaaatatgcaagatttaatCAAAACTTCTGTGCCAGTGATGACTATG
TTTTGCTTTATTAGGATTTGAGTGAGGTTGTTTTCAATCCTGGAAcccac
aaaacttttaaattaaatgaatacaaaaaagattttggcaaaagttatgc
taaaatatGCTTCTTTTTGTGCCAAAAGTGTGATTTCGATGAAATAGAAA
GCTCATCATTACCAactaaaacaaagcaaaaatcaGTCATAGCAATTGAC
GAAATTGATAATGATGATTGTGGTAAACATGATAATCATTTTGATGATGA
CGATGATCTCTTCCAAGCTGTTGATCCCAATTTAGTACTACCACCACAAT
GTTCTCCTCACGCACCTCCACCTCCACCACTACTGGCTCAGCCTCAGCCG
CATTCCAGGATTTACAACAAATCTTCAAATACAACATCATGTTGGTTGAT
CACAAGTTACAATAACAGGTATGGGTTAAAGTGTTGTGAAATCTATGTAA
AAATTCTATAATCATGGTAAGAGCTGGCTGAAGATCGATAAAAAGTTGAT
CTTTTCTAAAGAATGAATTAATTAAACTATACTAGAGTGATTGATGGGAA
AGTTTGTAAGAAATTTAGGAAATTTATgacaaatcttcaaaatttatgac
aTTTTATGACACTTTTACTTTTACGAAATTGGTGtagatttgtaaaaatt
tagGAATTTATGACAAATGGGAGGCCTGGACGTTTCCAAGTCCGACACAT
TGTTCATTTGTCGAACAGATGAGGTGTCGAACATCTTAAGCACCCAGTTG
TTTGACACCCAGTTGTTCGACACTTACTTGTTCGATTAATGGATGTCGAA
CATCTAAGcgcccacttgttcgacaaccCTTAATTGTTCTGTTCTTCTGT
TCGAGCTTCTGTTCATGTTCTTGATATGCAAGTTACGTCATGTTACGTCA
TTTTTCTctatcgaaaacacccgaaTTTTGCC Run BLAST on NCBI protein sequence of TCONS_00042295-protein >TCONS_00042295-protein ID=TCONS_00042295-protein|Name=TCONS_00042295-protein|organism=Clytia hemisphaerica|type=polypeptide|length=137bp
DRCAGCTFKFLKEDIYCKKCGSPRTKTEKQRTMNLSEFADARKRKLNQSN
KHGNTKIATSSSSTTITASKAAAKNVEINIGIASIDEKSSILKKRQGRMS
LRVLETIDRHDLLDAAIEKYARFNQNFCASDDYVLLY Run BLAST on NCBI transcript from alignment at sc0003332:10051..11382 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042295 ID=TCONS_00042295|Name=TCONS_00042295|organism=Clytia hemisphaerica|type=transcript|length=1332bp|location=Sequence derived from alignment at sc0003332:10051..11382 (Clytia hemisphaerica)
GGCAAAAttcgggtgttttcgatagAGAAAAATGACGTAACATGACGTAA
CTTGCATATCAAGAACATGAACAGAAGCTCGAACAGAAGAACAGAACAAT
TAAGggttgtcgaacaagtgggcgCTTAGATGTTCGACATCCATTAATCG
AACAAGTAAGTGTCGAACAACTGGGTGTCAAACAACTGGGTGCTTAAGAT
GTTCGACACCTCATCTGTTCGACAAATGAACAATGTGTCGGACTTGGAAA
CGTCCAGGCCTCCCATTTGTCATAAATTCctaaatttttacaaatctaCA
CCAATTTCGTAAAAGTAAAAGTGTCATAAAAtgtcataaattttgaagat
ttgtcATAAATTTCCTAAATTTCTTACAAACTTTCCCATCAATCACTCTA
GTATAGTTTAATTAATTCATTCTTTAGAAAAGATCAACTTTTTATCGATC
TTCAGCCAGCTCTTACCATGATTATAGAATTTTTACATAGATTTCACAAC
ACTTTAACCCATACCTGTTATTGTAACTTGTGATCAACCAACATGATGTT
GTATTTGAAGATTTGTTGTAAATCCTGGAATGCGGCTGAGGCTGAGCCAG
TAGTGGTGGAGGTGGAGGTGCGTGAGGAGAACATTGTGGTGGTAGTACTA
AATTGGGATCAACAGCTTGGAAGAGATCATCGTCATCATCAAAATGATTA
TCATGTTTACCACAATCATCATTATCAATTTCGTCAATTGCTATGACtga
tttttgctttgttttagtTGGTAATGATGAGCTTTCTATTTCATCGAAAT
CACACTTTTGGCACAAAAAGAAGCatattttagcataacttttgccaaaa
tcttttttgtattcatttaatttaaaagttttgtgggTTCCAGGATTGAA
AACAACCTCACTCAAATCCTAATAAAGCAAAACATAGTCATCACTGGCAC
AGAAGTTTTGattaaatcttgcatatttTTCGATTGCTGCATCTAACAAA
TCATGTCTATCAATGGTTTCCAAAACTCTGAGGCTCATACGCCCTTGTCG
TTTCttcaaaatagaagatttttcaTCAATACTAGCAATACCAATATTAA
TTTCAACATTCTTTGCTGCTGCTTTACTAGCGGTTATTGTTGTTGAGGAG
GATGAAGTGGCTATTTTGGTATTACCATGTTTGTTTGATTGATTGAGTTT
CCGTTTTCTTGCATCTGCAAATTCACTTAAGTTCATTGTTCtctgttttt
ctgtttttgtacGTGGAGAaccacattttttgcaataaataTCTTCTTTT
AGAAACTTGAAGGTACAACCAGCACATCGATC Coding sequence (CDS) from alignment at sc0003332:10051..11382 >TCONS_00042295 ID=TCONS_00042295|Name=TCONS_00042295|organism=Clytia hemisphaerica|type=CDS|length=414bp|location=Sequence derived from alignment at sc0003332:10051..11382 (Clytia hemisphaerica)
CTAATAAAGCAAAACATAGTCATCACTGGCACAGAAGTTTTGattaaatc
ttgcatatttTTCGATTGCTGCATCTAACAAATCATGTCTATCAATGGTT
TCCAAAACTCTGAGGCTCATACGCCCTTGTCGTTTCttcaaaatagaaga
tttttcaTCAATACTAGCAATACCAATATTAATTTCAACATTCTTTGCTG
CTGCTTTACTAGCGGTTATTGTTGTTGAGGAGGATGAAGTGGCTATTTTG
GTATTACCATGTTTGTTTGATTGATTGAGTTTCCGTTTTCTTGCATCTGC
AAATTCACTTAAGTTCATTGTTCtctgtttttctgtttttgtacGTGGAG
AaccacattttttgcaataaataTCTTCTTTTAGAAACTTGAAGGTACAA
CCAGCACATCGATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042295-exon-sc0003332-1491911889:10051..11382 | TCONS_00042295-exon-sc0003332-1491911889:10051..11382 | Clytia hemisphaerica | exon |
| TCONS_00042295-exon-sc0003332-1510915933:10051..11382 | TCONS_00042295-exon-sc0003332-1510915933:10051..11382 | Clytia hemisphaerica | exon |
| TCONS_00042295-exon-sc0003332-1575043694:10051..11382 | TCONS_00042295-exon-sc0003332-1575043694:10051..11382 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003332 | supercontig | sc0003332:10051..11382 . |
Blast
The following BLAST results are available for this feature:
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