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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042294 ID=TCONS_00042294|Name=TCONS_00042294|organism=Clytia hemisphaerica|type=transcript|length=761bp
GACGAAGACAGTGTTACTGATATAAGCGTAAGCGGAGACGGAACTTGGCA
AAAGCGTGGATATTCATCTTTAAATGGAGTAATGACTCTAATTGCAGAAG
GAAAATGCATAGACAATGAAGTTATGTCTAAAAAATGTAGACAGTGTGAT
GTGTGGGAGAAAAAGAAAGGAACAGAGGAGTATGAGAAATGGAAAGAAAC
TCATGATAACTTTTGTTCTATGAATCACCAAGGCAGCTCAGGCGCAATGG
AAGTAACTGGCTTGAAACGAATTTATCATCGTTCAGTGAAAAACCATAAA
TTAAGATATAAATTCTATATTGGAGATGGAGACAGCAAATCATTTGCTGA
AGTGAGTAGCTCTAATCCATACCCTGGCCGCAACCTCACAAAGGGTGAAT
GCAGTGGCCATGTACAAAAACGGGTCGGAACGCGTTTACGCAAAATCAAA
GTAAGTTACAAAGGCCGAAAGTTGAGCGATGGAAAAGGAATCGGGCGAGG
TGAAGGTCGTCTTACAGACAACATAATGAACACATTACAAAATCACTACG
GTTTGGCAATACGTCAAAATACTGGCAGTTTGTACGCTATGAAAAAGAAT
GTCGCCGCGGTATTATTTCACTCCACTGCAGACCCAGACCCCGAGAAacg
tcatcggttttgcccTTGCACAAAGGACTCCTGGTGTAAATACCAGAGTG
ACAAAATCACTGGTGAGAAAACCTACAAAGGTAAACTCAATATTGACAAA
ACAGTCTCAGA Run BLAST on NCBI protein sequence of TCONS_00042294-protein >TCONS_00042294-protein ID=TCONS_00042294-protein|Name=TCONS_00042294-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
DEDSVTDISVSGDGTWQKRGYSSLNGVMTLIAEGKCIDNEVMSKKCRQCD
VWEKKKGTEEYEKWKETHDNFCSMNHQGSSGAMEVTGLKRIYHRSVKNHK
LRYKFYIGDGDSKSFAEVSSSNPYPGRNLTKGECSGHVQKRVGTRLRKIK
VSYKGRKLSDGKGIGRGEGRLTDNIMNTLQNHYGLAIRQNTGSLYAMKKN
VAAVLFHSTADPDPEKRHRFCPCTKDSWCKYQSDKITGEKTYKGKLNIDK
TVS Run BLAST on NCBI transcript from alignment at sc0003332:8125..8885 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042294 ID=TCONS_00042294|Name=TCONS_00042294|organism=Clytia hemisphaerica|type=transcript|length=761bp|location=Sequence derived from alignment at sc0003332:8125..8885 (Clytia hemisphaerica)
TCTGAGACTGTTTTGTCAATATTGAGTTTACCTTTGTAGGTTTTCTCACC
AGTGATTTTGTCACTCTGGTATTTACACCAGGAGTCCTTTGTGCAAgggc
aaaaccgatgacgtTTCTCGGGGTCTGGGTCTGCAGTGGAGTGAAATAAT
ACCGCGGCGACATTCTTTTTCATAGCGTACAAACTGCCAGTATTTTGACG
TATTGCCAAACCGTAGTGATTTTGTAATGTGTTCATTATGTTGTCTGTAA
GACGACCTTCACCTCGCCCGATTCCTTTTCCATCGCTCAACTTTCGGCCT
TTGTAACTTACTTTGATTTTGCGTAAACGCGTTCCGACCCGTTTTTGTAC
ATGGCCACTGCATTCACCCTTTGTGAGGTTGCGGCCAGGGTATGGATTAG
AGCTACTCACTTCAGCAAATGATTTGCTGTCTCCATCTCCAATATAGAAT
TTATATCTTAATTTATGGTTTTTCACTGAACGATGATAAATTCGTTTCAA
GCCAGTTACTTCCATTGCGCCTGAGCTGCCTTGGTGATTCATAGAACAAA
AGTTATCATGAGTTTCTTTCCATTTCTCATACTCCTCTGTTCCTTTCTTT
TTCTCCCACACATCACACTGTCTACATTTTTTAGACATAACTTCATTGTC
TATGCATTTTCCTTCTGCAATTAGAGTCATTACTCCATTTAAAGATGAAT
ATCCACGCTTTTGCCAAGTTCCGTCTCCGCTTACGCTTATATCAGTAACA
CTGTCTTCGTC Coding sequence (CDS) from alignment at sc0003332:8125..8885 >TCONS_00042294 ID=TCONS_00042294|Name=TCONS_00042294|organism=Clytia hemisphaerica|type=CDS|length=759bp|location=Sequence derived from alignment at sc0003332:8125..8885 (Clytia hemisphaerica)
TGAGACTGTTTTGTCAATATTGAGTTTACCTTTGTAGGTTTTCTCACCAG
TGATTTTGTCACTCTGGTATTTACACCAGGAGTCCTTTGTGCAAgggcaa
aaccgatgacgtTTCTCGGGGTCTGGGTCTGCAGTGGAGTGAAATAATAC
CGCGGCGACATTCTTTTTCATAGCGTACAAACTGCCAGTATTTTGACGTA
TTGCCAAACCGTAGTGATTTTGTAATGTGTTCATTATGTTGTCTGTAAGA
CGACCTTCACCTCGCCCGATTCCTTTTCCATCGCTCAACTTTCGGCCTTT
GTAACTTACTTTGATTTTGCGTAAACGCGTTCCGACCCGTTTTTGTACAT
GGCCACTGCATTCACCCTTTGTGAGGTTGCGGCCAGGGTATGGATTAGAG
CTACTCACTTCAGCAAATGATTTGCTGTCTCCATCTCCAATATAGAATTT
ATATCTTAATTTATGGTTTTTCACTGAACGATGATAAATTCGTTTCAAGC
CAGTTACTTCCATTGCGCCTGAGCTGCCTTGGTGATTCATAGAACAAAAG
TTATCATGAGTTTCTTTCCATTTCTCATACTCCTCTGTTCCTTTCTTTTT
CTCCCACACATCACACTGTCTACATTTTTTAGACATAACTTCATTGTCTA
TGCATTTTCCTTCTGCAATTAGAGTCATTACTCCATTTAAAGATGAATAT
CCACGCTTTTGCCAAGTTCCGTCTCCGCTTACGCTTATATCAGTAACACT
GTCTTCGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042294-exon-sc0003332-1491911889:8125..8885 | TCONS_00042294-exon-sc0003332-1491911889:8125..8885 | Clytia hemisphaerica | exon |
| TCONS_00042294-exon-sc0003332-1510915933:8125..8885 | TCONS_00042294-exon-sc0003332-1510915933:8125..8885 | Clytia hemisphaerica | exon |
| TCONS_00042294-exon-sc0003332-1575043694:8125..8885 | TCONS_00042294-exon-sc0003332-1575043694:8125..8885 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003332 | supercontig | sc0003332:8125..8885 . |
Blast
The following BLAST results are available for this feature:
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