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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042288 ID=TCONS_00042288|Name=TCONS_00042288|organism=Clytia hemisphaerica|type=transcript|length=911bp
ATGCTGGAGCTTGAGGATAAGGAACGTGATATGGCGATAATGGGCTTTCT
TTTTACCCAAAAGCCCAAGACTGGTgacaaaatacaattttctatCCGCG
GGGTACATGTTTGTCGTAAGACGTTTCTCTTTTTGTACACTGTTTCAAAG
ACACTTTATTCCGCTATCTGcaaacattttgatgaaaatggtcCCACCCC
ACGCGTTCACGGAAATTCAAAGAGACTGCCTCATAACGTAATTGATCTGG
TTAGTACAGAGAGGGCCAGGAATTTCATAGAAAATTATGCGCTAGCGAAC
GCTATCTCTCTCCCCGGCCGTGTACCAAATTACCGTGACAGTGACGCCAA
ACTTCTTCTCATCCCGTCGTTCGAAACAAAAGAGAGTGTTTACAAATAGT
ACAAGGAATTGTGCATTGAgaacaattttgattttcttggacTAAGTTCG
TTTGGTCATTTATGGAAGACGCAGCTACCGAATGTTCTTATCACAAAACC
AATGGGTGATCTTTGCTGGGTGTGCCAACAAGGCAACGAGCGACTCTTGC
GGTCTCATTTGAATGACAATGAGGATAACGATGAAGAAGACCACGACAAA
GCCCAGGATGAGCAAACCACCCACATTATAGAAGCCACTCAAGAGGCTCG
GTATTATCGGGCTCAGGTATTATTTTATTTCTTGTAATGAGACGCAAGGG
GTCACTAGCAAGAGGGGAAAACCATCCATATATCGCAGTGCGTGAAGGGG
AAATGGGGTTAAGCCAAAGCGTCCGTCCATTGTTTGAATGACGTAATTTA
CTTATGCTCTCTCTATTGCTTTACTATAGGAAAAAGAAAACGGCTGAAAA
AGAGGCCGATTCACGTTTAGTTTTCGtttgaatttttccaaaataaccCC
TAGAATTCAAG Run BLAST on NCBI transcript from alignment at sc0003329:4481..5391 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042288 ID=TCONS_00042288|Name=TCONS_00042288|organism=Clytia hemisphaerica|type=transcript|length=911bp|location=Sequence derived from alignment at sc0003329:4481..5391 (Clytia hemisphaerica)
CTTGAATTCTAGGggttattttggaaaaattcaaaCGAAAACTAAACGTG
AATCGGCCTCTTTTTCAGCCGTTTTCTTTTTCCTATAGTAAAGCAATAGA
GAGAGCATAAGTAAATTACGTCATTCAAACAATGGACGGACGCTTTGGCT
TAACCCCATTTCCCCTTCACGCACTGCGATATATGGATGGTTTTCCCCTC
TTGCTAGTGACCCCTTGCGTCTCATTACAAGAAATAAAATAATACCTGAG
CCCGATAATACCGAGCCTCTTGAGTGGCTTCTATAATGTGGGTGGTTTGC
TCATCCTGGGCTTTGTCGTGGTCTTCTTCATCGTTATCCTCATTGTCATT
CAAATGAGACCGCAAGAGTCGCTCGTTGCCTTGTTGGCACACCCAGCAAA
GATCACCCATTGGTTTTGTGATAAGAACATTCGGTAGCTGCGTCTTCCAT
AAATGACCAAACGAACTTAgtccaagaaaatcaaaattgttcTCAATGCA
CAATTCCTTGTACTATTTGTAAACACTCTCTTTTGTTTCGAACGACGGGA
TGAGAAGAAGTTTGGCGTCACTGTCACGGTAATTTGGTACACGGCCGGGG
AGAGAGATAGCGTTCGCTAGCGCATAATTTTCTATGAAATTCCTGGCCCT
CTCTGTACTAACCAGATCAATTACGTTATGAGGCAGTCTCTTTGAATTTC
CGTGAACGCGTGGGGTGGgaccattttcatcaaaatgtttgCAGATAGCG
GAATAAAGTGTCTTTGAAACAGTGTACAAAAAGAGAAACGTCTTACGACA
AACATGTACCCCGCGGatagaaaattgtattttgtcACCAGTCTTGGGCT
TTTGGGTAAAAAGAAAGCCCATTATCGCCATATCACGTTCCTTATCCTCA
AGCTCCAGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042288-exon-sc0003329-1491911889:4481..5391 | TCONS_00042288-exon-sc0003329-1491911889:4481..5391 | Clytia hemisphaerica | exon |
| TCONS_00042288-exon-sc0003329-1510915933:4481..5391 | TCONS_00042288-exon-sc0003329-1510915933:4481..5391 | Clytia hemisphaerica | exon |
| TCONS_00042288-exon-sc0003329-1575043694:4481..5391 | TCONS_00042288-exon-sc0003329-1575043694:4481..5391 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003329 | supercontig | sc0003329:4481..5391 . |
Blast
The following BLAST results are available for this feature:
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