|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042264 ID=TCONS_00042264|Name=TCONS_00042264|organism=Clytia hemisphaerica|type=transcript|length=1154bp
attttcttctttattttacaTATAGATATTTTTCATCATCTTTTTcatcc
tttttctttttcgataTTAATTTACATAACAGTCCGAAAAAATTAAGGAT
TGATTCTTTCAAAAGGGACATGACGGCGACTGATTCTTCccttttttctt
ttcacttcTTGCGCTTACTATCTATGTGTTCTTTCCTTCCATTTCACTAC
AAGACTTTCACAGTTGTGTCAAAGTATATGATTTTTATCTTCAAAGGGgg
gaaattaatgaaaaatgaaaaatgggaAAAGTGATGACATGATATTAACT
CAGGGGTTGAAATGACAATACTTTTTATTGACTCCTACtcagaagaaaat
aatgaattactTCAACATCAATATATAAGAAAGGTGTAAAATTGAAGAAC
AGAAAGAAAAGCGATAAAATGATGGGacatgtaaaaaaaattaaaaagtc
acTTTTGCATTTTGTTTCCGTGAACAAAATAAGAGAAATATAGGTTTCCG
TCCAGTTAGCACCTGCACTCAAGCATCGAATGTTAAAAAAGCGGTTCTTC
TTTTTCGACTATTCATTGCAAAACAATAGACATGTGACAATCTTAACGCC
GTTTGACAATTCACTATATAGTGATGAATAAAGAcaagagaaaacttttt
ttcaataaagacgTATATTCGCATACAAATAAAAGCATTACTTGAAAGAG
CAGCAGATGTTTTTGCTTGATATGTTAAGCGTTGCTAGGTTGTATGAATG
ACACATGTCATTTCTAATATCTTTCTTCTTTActtctcctttttcttttt
cttttcttttcaactttttcacttttttttaagtAAGCGAGGACGCGCTT
TTGTtaacaaaaatcatttttaataaGTCGTCACACACATGCTTATTTTG
TGTGTGTGTATTTTTTTACACGACTAAAATCATTTTGAATCGTCCTTATT
TTCAGCAAACATCCTTCTAATTAAGAAAGTATCCATTCTTTTTTGTCGAA
CATTTACTCATTAAAATCATGCAGAAGAACAGCAACAATCAGTCGGGttt
gtttttgtgaaaactAAACGATACTGAAGTGACAAAACTATGNCACAGAG
TATGACACTGTGAATGTTGATAGTTGTTTTCACAGTGACCCTTGTAACAT
GCTG Run BLAST on NCBI transcript from alignment at sc0003319:5558..6711 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042264 ID=TCONS_00042264|Name=TCONS_00042264|organism=Clytia hemisphaerica|type=transcript|length=1154bp|location=Sequence derived from alignment at sc0003319:5558..6711 (Clytia hemisphaerica)
CAGCATGTTACAAGGGTCACTGTGAAAACAACTATCAACATTCACAGTGT
CATACTCTGTGNCATAGTTTTGTCACTTCAGTATCGTTTagttttcacaa
aaacaaaCCCGACTGATTGTTGCTGTTCTTCTGCATGATTTTAATGAGTA
AATGTTCGACAAAAAAGAATGGATACTTTCTTAATTAGAAGGATGTTTGC
TGAAAATAAGGACGATTCAAAATGATTTTAGTCGTGTAAAAAAATACACA
CACACAAAATAAGCATGTGTGTGACGACttattaaaaatgatttttgtta
ACAAAAGCGCGTCCTCGCTTacttaaaaaaaagtgaaaaagttgaaaaga
aaagaaaaagaaaaaggagaagTAAAGAAGAAAGATATTAGAAATGACAT
GTGTCATTCATACAACCTAGCAACGCTTAACATATCAAGCAAAAACATCT
GCTGCTCTTTCAAGTAATGCTTTTATTTGTATGCGAATATAcgtctttat
tgaaaaaaagttttctcttgTCTTTATTCATCACTATATAGTGAATTGTC
AAACGGCGTTAAGATTGTCACATGTCTATTGTTTTGCAATGAATAGTCGA
AAAAGAAGAACCGCTTTTTTAACATTCGATGCTTGAGTGCAGGTGCTAAC
TGGACGGAAACCTATATTTCTCTTATTTTGTTCACGGAAACAAAATGCAA
AAgtgactttttaattttttttacatgtCCCATCATTTTATCGCTTTTCT
TTCTGTTCTTCAATTTTACACCTTTCTTATATATTGATGTTGAagtaatt
cattattttcttctgaGTAGGAGTCAATAAAAAGTATTGTCATTTCAACC
CCTGAGTTAATATCATGTCATCACTTTtcccatttttcatttttcattaa
tttcccCCCTTTGAAGATAAAAATCATATACTTTGACACAACTGTGAAAG
TCTTGTAGTGAAATGGAAGGAAAGAACACATAGATAGTAAGCGCAAgaag
tgaaaagaaaaaaggGAAGAATCAGTCGCCGTCATGTCCCTTTTGAAAGA
ATCAATCCTTAATTTTTTCGGACTGTTATGTAAATTAAtatcgaaaaaga
aaaaggatgAAAAAGATGATGAAAAATATCTATAtgtaaaataaagaaga
aaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042264-exon-sc0003319-1491911889:5558..6711 | TCONS_00042264-exon-sc0003319-1491911889:5558..6711 | Clytia hemisphaerica | exon |
| TCONS_00042264-exon-sc0003319-1510915933:5558..6711 | TCONS_00042264-exon-sc0003319-1510915933:5558..6711 | Clytia hemisphaerica | exon |
| TCONS_00042264-exon-sc0003319-1575043694:5558..6711 | TCONS_00042264-exon-sc0003319-1575043694:5558..6711 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003319 | supercontig | sc0003319:5558..6711 . |
Blast
The following BLAST results are available for this feature:
|
