TCONS_00042249 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042249
Unique NameTCONS_00042249
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length178

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042249 ID=TCONS_00042249|Name=TCONS_00042249|organism=Clytia hemisphaerica|type=transcript|length=178bp
GTTAAAAAAACATGTGCTTTTCAAAACCAACTTTCACTTTTAACGTCAAC
AATATTGAATATTATACGATTTTTAGAGGGGAAGCAAGAAAGGAgttctt
tttttcactttgttgcAAATAACTTGCAGATATGGCTACTGACGATGGAG
TTATTAAAGCCACTTCTGCCAATGTCCA
Run BLAST on NCBI

transcript from alignment at sc0003308:12307..12612-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042249 ID=TCONS_00042249|Name=TCONS_00042249|organism=Clytia hemisphaerica|type=transcript|length=306bp|location=Sequence derived from alignment at sc0003308:12307..12612- (Clytia hemisphaerica)
GTTAAAAAAACATGTGCTTTTCAAAACCAACTTTCACTTTTAACGTCAAC
AATATTGAATATTATACGATTTTTAGAGGGGAAGCAAGAAAGGAGTTCTT
TTTTTCACTTTGTTGCAAATAACTTGCAGATATGGCTACTGACGATGGAG
TTATTAAAGGTGAGAAGAAATTTCTCTTAATGCCTGATTATTCTATTTAT
CATATTTATCAAAATCTGAGTTTTTCTGAAAAAATCGAAAAATGAAAAAT
TAATTGAAAGAGGAATGTAAAAAATTGTATGCTGCAGCCACTTCTGCCAA
TGTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026109XLOC_026109Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042249-exon-sc0003308-1575043694:12454..12612TCONS_00042249-exon-sc0003308-1575043694:12454..12612Clytia hemisphaericaexon
TCONS_00042249-exon-sc0003308-1575043694:12307..12325TCONS_00042249-exon-sc0003308-1575043694:12307..12325Clytia hemisphaericaexon
TCONS_00042249-exon-sc0003308-1510915933:12454..12612TCONS_00042249-exon-sc0003308-1510915933:12454..12612Clytia hemisphaericaexon
TCONS_00042249-exon-sc0003308-1510915933:12307..12325TCONS_00042249-exon-sc0003308-1510915933:12307..12325Clytia hemisphaericaexon
TCONS_00042249-exon-sc0003308-1491911889:12454..12612TCONS_00042249-exon-sc0003308-1491911889:12454..12612Clytia hemisphaericaexon
TCONS_00042249-exon-sc0003308-1491911889:12307..12325TCONS_00042249-exon-sc0003308-1491911889:12307..12325Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003308supercontigsc0003308:12307..12612 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042249 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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