TCONS_00042244 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042244
Unique NameTCONS_00042244
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length214

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042244 ID=TCONS_00042244|Name=TCONS_00042244|organism=Clytia hemisphaerica|type=transcript|length=214bp
TACTCGAAATGTGACATTTATGTAAACGAAACactgaaaactaattttta
ttattttggaagcCGGAAATCCACCGGATGTcaaaaaaaagccaaatttg
caCACAATACTTGTAGGTTTGTAAATTAGCATCTATTAATTGTATATAAT
TTATCGAAAATATGAAATAGCAAATACTCATATTCTTAGATTAATGAAAT
CGAGACTCAAGTTA
Run BLAST on NCBI

transcript from alignment at sc0003306:7600..7813

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042244 ID=TCONS_00042244|Name=TCONS_00042244|organism=Clytia hemisphaerica|type=transcript|length=214bp|location=Sequence derived from alignment at sc0003306:7600..7813 (Clytia hemisphaerica)
TAACTTGAGTCTCGATTTCATTAATCTAAGAATATGAGTATTTGCTATTT
CATATTTTCGATAAATTATATACAATTAATAGATGCTAATTTACAAACCT
ACAAGTATTGTGtgcaaatttggcttttttttgACATCCGGTGGATTTCC
GgcttccaaaataataaaaattagttttcagtGTTTCGTTTACATAAATG
TCACATTTCGAGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026104XLOC_026104Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042244-exon-sc0003306-1491911889:7600..7813TCONS_00042244-exon-sc0003306-1491911889:7600..7813Clytia hemisphaericaexon
TCONS_00042244-exon-sc0003306-1510915933:7600..7813TCONS_00042244-exon-sc0003306-1510915933:7600..7813Clytia hemisphaericaexon
TCONS_00042244-exon-sc0003306-1575043694:7600..7813TCONS_00042244-exon-sc0003306-1575043694:7600..7813Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003306supercontigsc0003306:7600..7813 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042244 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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