TCONS_00042239 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042239
Unique NameTCONS_00042239
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042239 ID=TCONS_00042239|Name=TCONS_00042239|organism=Clytia hemisphaerica|type=transcript|length=151bp
GAAAAACACAGACACAAAAAAATGGCactaatttttgtatttttgtaatg
TGCTGAAGTCAATTTGTCAGCTGTGACATGGTTGTTTTATCTGTAACTTG
TGGAATTGTTGCTTTTGTATCAATTCTATATTTACAATCACAAACGGTAG
G
Run BLAST on NCBI

transcript from alignment at sc0003302:5820..5970

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042239 ID=TCONS_00042239|Name=TCONS_00042239|organism=Clytia hemisphaerica|type=transcript|length=151bp|location=Sequence derived from alignment at sc0003302:5820..5970 (Clytia hemisphaerica)
CCTACCGTTTGTGATTGTAAATATAGAATTGATACAAAAGCAACAATTCC
ACAAGTTACAGATAAAACAACCATGTCACAGCTGACAAATTGACTTCAGC
AcattacaaaaatacaaaaattagtGCCATTTTTTTGTGTCTGTGTTTTT
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026099XLOC_026099Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042239-exon-sc0003302-1491911889:5820..5970TCONS_00042239-exon-sc0003302-1491911889:5820..5970Clytia hemisphaericaexon
TCONS_00042239-exon-sc0003302-1510915933:5820..5970TCONS_00042239-exon-sc0003302-1510915933:5820..5970Clytia hemisphaericaexon
TCONS_00042239-exon-sc0003302-1575043694:5820..5970TCONS_00042239-exon-sc0003302-1575043694:5820..5970Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003302supercontigsc0003302:5820..5970 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042239 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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