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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042221 ID=TCONS_00042221|Name=TCONS_00042221|organism=Clytia hemisphaerica|type=transcript|length=905bp
CTGGAATATATAATATGATAGAATGAAATagaaagatggaatttttagTT
CAACCAAGagatattcaattcccaaactAATTAAAATAAGTTTTCAACAA
AGAGTACCTTCTTTTCCAGGCAAACTGTATATCTAACttatctaaaataa
atatttttcgtttttatttttaaataacacGAACAGTTCAGGGTGCAAAT
TTACTCAAAGCGTTTAAGAACATCAACCACATCAACTCATCATCATCACT
AGTTCCAATTCCCTGATGACTTCTTCATTTCATACAGATCTATTCGCGAT
TCCCCATTTCTTGACATCTTCACTATACTTAATGGTCAGTTCTTCTCCTT
GCTTAATCTCGCATTTCGACAGTAAAACCATCGAGTCTCCGATCGCTAAC
AAAACACAGTTCGGTTTCTTATCATGATTCAAGAGGGAAATTCGCATCAG
AAGAGAAACGCCTTGCTCCTTGTCTACATCCCATCCGAAAGTATTGACGT
CAAGGATACCTTCTGCCATTTTGATTGTCAAAAGACCAGTATCAACTTCA
CACTGTTTTGGCGTTTGTGGTAAGAAAGGAGCAATATGATGATCTAGGGT
TCGGTAACCATACGAATCAAGatcactaattttttttttttttttcttct
ttattgaaacaaagacacgtgtacactacgaacatatattacaaaacatt
acttaaacataaaatatagtccctccccccgctaggaactaacgttatat
cgccagaggtactagactatgtaaaaaataaataaataagtaaataaatt
aaagcaaaaaaaaaaaaatcttggagaaggaagctacagttgttaggtaa
aagcctaaaataaagcaccgctaaaccttccagtttcgttaagaaattca
acaac Run BLAST on NCBI transcript from alignment at sc0003289:5634..6538 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042221 ID=TCONS_00042221|Name=TCONS_00042221|organism=Clytia hemisphaerica|type=transcript|length=905bp|location=Sequence derived from alignment at sc0003289:5634..6538 (Clytia hemisphaerica)
gttgttgaatttcttaacgaaactggaaggtttagcggtgctttatttta
ggcttttacctaacaactgtagcttccttctccaagattttttttttttt
gctttaatttatttacttatttatttattttttacatagtctagtacctc
tggcgatataacgttagttcctagcggggggagggactatattttatgtt
taagtaatgttttgtaatatatgttcgtagtgtacacgtgtctttgtttc
aataaagaagaaaaaaaaaaaaaaaattagtgatCTTGATTCGTATGGTT
ACCGAACCCTAGATCATCATATTGCTCCTTTCTTACCACAAACGCCAAAA
CAGTGTGAAGTTGATACTGGTCTTTTGACAATCAAAATGGCAGAAGGTAT
CCTTGACGTCAATACTTTCGGATGGGATGTAGACAAGGAGCAAGGCGTTT
CTCTTCTGATGCGAATTTCCCTCTTGAATCATGATAAGAAACCGAACTGT
GTTTTGTTAGCGATCGGAGACTCGATGGTTTTACTGTCGAAATGCGAGAT
TAAGCAAGGAGAAGAACTGACCATTAAGTATAGTGAAGATGTCAAGAAAT
GGGGAATCGCGAATAGATCTGTATGAAATGAAGAAGTCATCAGGGAATTG
GAACTAGTGATGATGATGAGTTGATGTGGTTGATGTTCTTAAACGCTTTG
AGTAAATTTGCACCCTGAACTGTTCgtgttatttaaaaataaaaacgaaa
aatatttattttagataaGTTAGATATACAGTTTGCCTGGAAAAGAAGGT
ACTCTTTGTTGAAAACTTATTTTAATTagtttgggaattgaatatctCTT
GGTTGAActaaaaattccatctttctATTTCATTCTATCATATTATATAT
TCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042221-exon-sc0003289-1491911889:5634..6538 | TCONS_00042221-exon-sc0003289-1491911889:5634..6538 | Clytia hemisphaerica | exon |
| TCONS_00042221-exon-sc0003289-1510915933:5634..6538 | TCONS_00042221-exon-sc0003289-1510915933:5634..6538 | Clytia hemisphaerica | exon |
| TCONS_00042221-exon-sc0003289-1575043694:5634..6538 | TCONS_00042221-exon-sc0003289-1575043694:5634..6538 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003289 | supercontig | sc0003289:5634..6538 . |
Blast
The following BLAST results are available for this feature:
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