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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042219 ID=TCONS_00042219|Name=TCONS_00042219|organism=Clytia hemisphaerica|type=transcript|length=1335bp
CAAATCAAACTGATTTAGGCATTAATTGAAGCAAATGAAACTATTATTTA
CTATGAAAAGAAGACTTTTGCAAAGCATATGAAGTTGTTGAAATTACAGT
GCAATCTCCACCATGAATATCGAAAAAGCTAAAGAATCCCTTTTTAATCC
GATGCAAAACATAAATCGTGAGGCTTTTATGACTATCTTGGGAGAGATTT
GGCCTAAATATGGGCAGATAAAGATACATTAGTTTCATGTGCCAAGCGGG
TTTGAATAACATCAAGTGGATTGAGCGTAAACTTCATGCAGTAAGATAAG
CTTGACAGAGCAGCAGCATGTATACAAGAAGAAATCCCTCCATCAACATC
TACATCAACTCCAGACTCATCATGTCTCCTTCtgacaaaagaaaaggttc
TCGTGATTATTGGAAGGCTAAATTTGGCCAGGCTCAGTCCCTGATAAGGG
AGATGGTAGAAAGAAGCATCCAACTGGAGGAAATTCCTTGCCTTCTGACA
ATAAAAAGGGTTAAGCCACACTAAGAAAAGAAAGCAACCACAACTACAAG
GGTGGCTCAGGTACACGGCTTGACGAGGACTAAAGAtgtagcaaccaagg
tcaaagAAATCAGGGATGAGAAACTGAAGAAggaaactgaaaaagaagaN
GGTCAAAGAAATCAGGGATGAGAAACTGAAGAAggaaactgaaaaagaag
aagcaaAGAAGAGAGAGTAGATCAGAGAAACATTCATCAAATGCAAAACT
CAATGTATCTGTTTGCAACAAAAATCTTTGGCTTTAGGATTAAAGCAGTG
CCCAGTATTGCACTATTGCATTATCATTCAGTTTGCAGCAAAGCAAGCTG
TAAAGTTAATGGAATCAAACCGCTGATGATATTACCAGCCAAACAACATT
CAATCTCTAAACGATTGTTTGAGGATGATTCGTCATCAGGAAGGGGAGGA
ATTTGAATCTAAAGAAAGCGAAATGTCCGAAGATAAAACTGATGAAGAAG
ACGTGATATCCAAAAACTCAAGAATTGCTGGAAAGGCCTGGCATAGCCAA
CAAAAGAGACTGGAGTCACTGGTAGATGGTATGCTGCCATCTACACcacc
aagaaaacaaaaaggttgtACAGTATATTGGTCGTTTGTTGAAGAGATTC
TTAAAAGATGAAGATGGCGCTGTTAACTCACTTCAGTTGCACTGTCTAAA
GCCTAAAGTTGGGAGTGGCACTGTTTTTGAAGACACCCCAGACCACTATT
TCTGTGTttgacatcaaaaaattctaaaacttgcaatttttctcatttgt
acctcaaaacccacaatttaaaaatgagttttttg Run BLAST on NCBI transcript from alignment at sc0003288:9..1343 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042219 ID=TCONS_00042219|Name=TCONS_00042219|organism=Clytia hemisphaerica|type=transcript|length=1335bp|location=Sequence derived from alignment at sc0003288:9..1343 (Clytia hemisphaerica)
caaaaaactcatttttaaattgtgggttttgaggtacaaatgagaaaaat
tgcaagttttagaattttttgatgtcaaACACAGAAATAGTGGTCTGGGG
TGTCTTCAAAAACAGTGCCACTCCCAACTTTAGGCTTTAGACAGTGCAAC
TGAAGTGAGTTAACAGCGCCATCTTCATCTTTTAAGAATCTCTTCAACAA
ACGACCAATATACTGTacaacctttttgttttcttggtgGTGTAGATGGC
AGCATACCATCTACCAGTGACTCCAGTCTCTTTTGTTGGCTATGCCAGGC
CTTTCCAGCAATTCTTGAGTTTTTGGATATCACGTCTTCTTCATCAGTTT
TATCTTCGGACATTTCGCTTTCTTTAGATTCAAATTCCTCCCCTTCCTGA
TGACGAATCATCCTCAAACAATCGTTTAGAGATTGAATGTTGTTTGGCTG
GTAATATCATCAGCGGTTTGATTCCATTAACTTTACAGCTTGCTTTGCTG
CAAACTGAATGATAATGCAATAGTGCAATACTGGGCACTGCTTTAATCCT
AAAGCCAAAGATTTTTGTTGCAAACAGATACATTGAGTTTTGCATTTGAT
GAATGTTTCTCTGATCTACTCTCTCTTCTttgcttcttctttttcagttt
ccTTCTTCAGTTTCTCATCCCTGATTTCTTTGACCNtcttctttttcagt
ttccTTCTTCAGTTTCTCATCCCTGATTTctttgaccttggttgctacaT
CTTTAGTCCTCGTCAAGCCGTGTACCTGAGCCACCCTTGTAGTTGTGGTT
GCTTTCTTTTCTTAGTGTGGCTTAACCCTTTTTATTGTCAGAAGGCAAGG
AATTTCCTCCAGTTGGATGCTTCTTTCTACCATCTCCCTTATCAGGGACT
GAGCCTGGCCAAATTTAGCCTTCCAATAATCACGAgaaccttttcttttg
tcaGAAGGAGACATGATGAGTCTGGAGTTGATGTAGATGTTGATGGAGGG
ATTTCTTCTTGTATACATGCTGCTGCTCTGTCAAGCTTATCTTACTGCAT
GAAGTTTACGCTCAATCCACTTGATGTTATTCAAACCCGCTTGGCACATG
AAACTAATGTATCTTTATCTGCCCATATTTAGGCCAAATCTCTCCCAAGA
TAGTCATAAAAGCCTCACGATTTATGTTTTGCATCGGATTAAAAAGGGAT
TCTTTAGCTTTTTCGATATTCATGGTGGAGATTGCACTGTAATTTCAACA
ACTTCATATGCTTTGCAAAAGTCTTCTTTTCATAGTAAATAATAGTTTCA
TTTGCTTCAATTAATGCCTAAATCAGTTTGATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042219-exon-sc0003288-1491911889:9..1343 | TCONS_00042219-exon-sc0003288-1491911889:9..1343 | Clytia hemisphaerica | exon |
| TCONS_00042219-exon-sc0003288-1510915933:9..1343 | TCONS_00042219-exon-sc0003288-1510915933:9..1343 | Clytia hemisphaerica | exon |
| TCONS_00042219-exon-sc0003288-1575043694:9..1343 | TCONS_00042219-exon-sc0003288-1575043694:9..1343 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003288 | supercontig | sc0003288:9..1343 . |
Blast
The following BLAST results are available for this feature:
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