TCONS_00042184 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042184
Unique NameTCONS_00042184
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length95

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042184 ID=TCONS_00042184|Name=TCONS_00042184|organism=Clytia hemisphaerica|type=transcript|length=95bp
TCGCCCTGagttctttcattttgaagaaaaagatggTTGCTACCTCCTCA
CATTTGATGAAGAAAACTTTGCAAGTTGAAGGAAATGTTGAAAAA
Run BLAST on NCBI

transcript from alignment at sc0003264:32..126

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042184 ID=TCONS_00042184|Name=TCONS_00042184|organism=Clytia hemisphaerica|type=transcript|length=95bp|location=Sequence derived from alignment at sc0003264:32..126 (Clytia hemisphaerica)
TTTTTCAACATTTCCTTCAACTTGCAAAGTTTTCTTCATCAAATGTGAGG
AGGTAGCAAccatctttttcttcaaaatgaaagaactCAGGGCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026050XLOC_026050Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042184-exon-sc0003264-1491911889:32..126TCONS_00042184-exon-sc0003264-1491911889:32..126Clytia hemisphaericaexon
TCONS_00042184-exon-sc0003264-1510915933:32..126TCONS_00042184-exon-sc0003264-1510915933:32..126Clytia hemisphaericaexon
TCONS_00042184-exon-sc0003264-1575043694:32..126TCONS_00042184-exon-sc0003264-1575043694:32..126Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003264supercontigsc0003264:32..126 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042184 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top