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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042181 ID=TCONS_00042181|Name=TCONS_00042181|organism=Clytia hemisphaerica|type=transcript|length=1202bp
AGACGAGTGTAAAGACATGGAAGAATATCATAGCGAGACATTGGAAAGCA
AATTTTTTGCTCCCTTTGCAAACATACCTTACGTTTCTAATGTACATTAC
GCTCGGCCTTCCGATGTTTTTATACCGAAaggttattttcaaaacattga
agagattaaaaatttcaaattttttgaagatgaTACAGTTATATGTGGAT
TTCTTAAAACAGGTACGAATTGGTGCGAAAGGATTGTTTGGGCACTCCGT
AATGATATCAAATTGAACATTCAACATGCACCCCCTGTATCAGTTTTCGA
CATTGTTATGGGTATAGGAGATTTTGATAGTGACAACAACAAAGCTCACG
ATGAGATTTTTTCGTCCATGAAACGACCACGTGTTATCAAAATGCATCTT
ACATATGAATTATTACCAAGACAGTTTCAACAAAAGCAACCTAAGATGAT
TTACATGCTTCGAAACCCAAGAGATGTTTGCCAGTCCCTTCACAGTCACT
TCTATACACTCTACGATGACTTTTCTGAATCATTACAAGATGTTGTTAAT
CTCATGACCGATGATGCTGGATTCTATTCTGGTCCGTTTTTTAAACATGT
TTTGGGATACTGGAAACGACGTTCttatgaaaatatatttatcatttttt
acgaagaaatgaaaaaagatttatccggTCATATTAAGAAGATTGCTGAT
TTCTTAGACATTGAAATTTTAGATGAAGAAGTGTCAAAACTGGCAAACAT
TTTTCCTTTGATTCGATGAAACGAAAAGCAGAGCAAATGATTCCCTTTCA
TGCAAAGCAGGAAGGTCATAGTTCAACAGTCGAAGCAGCTCACAAAGGAA
AGACAATGTTTAACAAGGGACAAGCTGGATCGTGGAAGGTTCTATTTACA
CCAGCGATGACAAAACAAATGGAAGAATGGGAATCAAAATGGTTGAGAGA
TACTGATCTTGAACTTATTTATGAATAGTACTGGAGTATCGAAACATGTA
AAATAAGAGttagataaaattttgaaacgaGTAAAATGaaacatacacgc
ttttttttacaagaatagtgtactttgaatgagggtcaagtattcttaag
aaattggcaaaattgagggtgaaatcttcttaacgtattcttgacttttt
tacaaacatgagaaaatcaatttgagggtttggacttttgagtgaacatt
tg Run BLAST on NCBI protein sequence of TCONS_00042181-protein >TCONS_00042181-protein ID=TCONS_00042181-protein|Name=TCONS_00042181-protein|organism=Clytia hemisphaerica|type=polypeptide|length=255bp
DECKDMEEYHSETLESKFFAPFANIPYVSNVHYARPSDVFIPKGYFQNIE
EIKNFKFFEDDTVICGFLKTGTNWCERIVWALRNDIKLNIQHAPPVSVFD
IVMGIGDFDSDNNKAHDEIFSSMKRPRVIKMHLTYELLPRQFQQKQPKMI
YMLRNPRDVCQSLHSHFYTLYDDFSESLQDVVNLMTDDAGFYSGPFFKHV
LGYWKRRSYENIFIIFYEEMKKDLSGHIKKIADFLDIEILDEEVSKLANI
FPLIR Run BLAST on NCBI transcript from alignment at sc0003263:4145..10180+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042181 ID=TCONS_00042181|Name=TCONS_00042181|organism=Clytia hemisphaerica|type=transcript|length=6036bp|location=Sequence derived from alignment at sc0003263:4145..10180+ (Clytia hemisphaerica)
AGACGAGTGTAAAGACATGGAAGAATATCATAGCGAGACATTGGAAAGCA
AATTTTTTGCTCCCTTTGCAAACATACCTTACGTTTCTAATGTACATTAC
GCTCGGCCTTCCGATGTTTTTATACCGAAaggttattttcaaaacattga
agagattaaaaatttcaaattttttgaagatgaTACAGTTATATGTGGAT
TTCTTAAAACAGGTAGCGTTAGTATTGAACGTTTTTTTTGTTCGCACATG
TGTATATTGTGCCTTgatatttcgattttttatACCTTCTGGACGTATAA
TTAACCCCTTGACAATATAATCTTCTACCCCATTTGTACAGTGTTTTGTT
CGTGAAGAGTCATATCATAtcattttttgccaatttcgatcATTTCCGCG
AAAAATAGAAATCCAATTCTCGgcgaaaatttcaaagaaaaatgaaagaa
atcgaaaaaagaGACTGATTGAGCGATTCAGAAAAAGtcttattttgaga
aaatttatcCGCTGAAGGAACTCTGAAGCTGTTGGGTTGTCGAGGTAGGT
AGGAAgtataccttaagagaagaaattttggcgggaagaaattttagcga
atgaGCCCATTCGCCAATTTTAGTgcaatttggcggaatttattttgccg
atttaaaaaaaattctaaatttggcgagacataattttggcgaacgaccc
attttttgttgaatattaaGCTTAAAAAGGATGAAAAAGGGTTTCTagta
aaagaaatttaaatttggcgggaattaatTTAGGCGAATGGCCCATATAT
CTAAATTTAGCGGGAAGAAATTtcggcgaatttggcgaatttttgtggca
attcgccaaattcgccaaaatttcttctcttaaggtaagtTCAGGTTCTC
GTTTTGAAGTTCACACTTCTTAGACAGTTTTTGATGAAAGACTTGAACCT
GGAGACTCTCTATAGAAACGCGTTATTGTAATGATGTTTTATCGATAATC
TTTAGGTACGAATTGGTGCGAAAGGATTGTTTGGGCACTCCGTAATGATA
TCAAATTGAACATTCAACATGCACCCCCTGTATCAGTTTTCGAGTAAGTG
aattttagagtccacaaagccttaaaatgttcttaacttgttcttaagat
tttggccatcgaagccttatgttcttctaTACTTATTTGTTTtcgatggt
ttgagacagattcaaatgTAGCCCAATCGGCGACGCATCGCTATGTCTTG
TCTCCGGTGGagaaaataccctacaatttccgccctactggaaaattaaa
atttttatttaggttttttattcgttttttttttcgtcgtggggaaattt
cgtcacctagaggcattttcgtcactttatTATCTATTATAAGATTTTGA
Agcagatttagaaaaattttccgaaaaaataattttagatacgccatcta
ccgcaaaaattttttcaaaatgttttttctccgccgaaactaagctcttc
agtcttcattttcttcttcatcaaattttttcattgcgattcttaaattt
tcagactcaaggataattggcctaacagttttgtgggctacatcaagtag
aactttacattttgtaagtggcaaatataaaaaattcactatggtcagag
ccctgtTTTCACTTCACTTCACTTCGGCTACCCGAAGTGAAACAGTACGT
GTTACCACCCCCTAACTTAGCTTGTTGTGTTTGTTAGGCAAAAGAACTCG
TTTGAAAAGAAAGTGATTTTATTTGTTCTGTTAAGAAACATCGCTGGAAA
CGTATACAATGGAAAACTACGATAGAAATCCTTTTTTtctgttgaaataa
aaaaaaatttggtcgGGGATTAAAAAaccgggtaaaagttttgggcGGGG
GGAAAAAtcaggtaaaagttttggttggggataaaaaaaatcgggtaaaa
ctTTTGGTCGGGTgttaaaatatcaaagaaataattcgtcgggggaaaat
ttcgtcaccccttcaaaattttcgtcactttccccagACATTTCTCCCCC
GATAAGGTACGCAAAGTTCCTAGCCTCCCGCTAAAAACCCTAGATTATAC
CACCAGGAGGTAGGAACCAAAAactgagaacaatagaattcccaaTCCCT
TTTTGGATTTCAATAGATAGGGGCTGTGAGACACGGGTGGTGTAAAGTGA
AAAGAACAAAATGTTTGAAACAGGTGCTGCAAAAACCAAATACatgtatt
ttcttttataagcataacgtttataagcatacgcaggctcagttttcggc
acctaaacaatggctctattgttttagaacaatagaatgctaagcataat
gcgagcctgatataggggcagacacttgcttataaaaaaaaaacatgtac
acaaATGGTAACGAAAGGATATGTTCTACATAGTTGCTATTGTTGCCACC
CTCTCATTCGATGTTCAAGGGgtcaagaattttcttcaaatcagagaaat
atttgaattagagagtACTTTCCACCAGAGGGAACCAATGGTTTAGTTCC
TATTAcagataaattaaaattaaaaaggttCGAATTAAAACAACAATAGG
AAAATATTAGATAGAGAGTTGCCCTGGGTTCAGGAAAATTTCGTAATCGA
AACTTTCCAGAAGTTTCCCATACATCAAGCACTGTCATATCAAAGGATTA
TCATCTTTCAATATCACAGCATTGTTATGGGTATAGGAGATTTTGATAGT
GACAACAACAAAGCTCACGATGAGATTTTTTCGTCCATGAAACGACCACG
TGTTATCAAAATGCATCTTACATATGAATTATTACCAAGACAGTTTCAAC
AAAAGCAACCTAAGGTATTTATACTCTTTCTCACCTGCAAACATCAATAG
AATCTGATAGAGTCATTTATAAGTAAGGCTAAAATAAGGCGATGTTGGAA
ATTTTCATACTTGACAAAATATAACAAACAAAATAGATCAACAGACGATA
TTGGcttcacatgaaaactcagatgaCCCACCCAATTTCTCCACGATGCT
TTGTGTGGAAAAAATTTCAtcgtgaacttttttccgcgcaaagcattgtg
ggtaattttcgggggtcaaatctgagttagTTTCAccttaagccgatatc
gtctacaTTACATACTAGGCCAGTCAATCCCAAGGTGCATCATGTTTCGT
CGGAAATCAAGAATTTCCATAGAGAACGGGacttaccgtgaaaagcacag
gccgatatcatatattgacctgtgccgaccaatcgagattcAGCACGCAA
TcaaaatgaatctatgtttgcTTTTTCATTTCtgtcatttgttttccttt
tttctgcagagacAGCTTTTCCCATAAATTATGctcgcgcatcgaaatta
tcaaaatgcgcgcgaaagtactactaagtaatacgccgaaaactggccaa
tcaggccgaacccgcattgcagggaaaaatttCCCTGCAGgtgagttacc
tgcgccaagcgttaaacaagcagcaaaaatatcataaactagactgtgaa
caaagtttaacgcttggattcccaggctaacttAACCTGTGATAATCAGG
GTAAACGGGACTGTTTACATACAAGTCAGATTACAGAAACCCAAATATTC
GACGCAAATCATCGGGAAATATCTTTCTTTATATCACCAATTAGATGATT
TACATGCTTCGAAACCCAAGAGATGTTTGCCAGTCCCTTCACAGTCACTT
CTATACACTCTACGATGACTTTTCTGAATCATTACAAGATGTTGTTAATC
TCATGACCGATGATGCTGGATTCTATTCTGGTCCGTTTTTTAAACATGTT
TTGGGATACTGGAAACGACGTTCttatgaaaatatatttatcatttttta
cgaagaaatgaaaaaagatttatccggTCATATTAAGAAGATTGCTGATT
TCTTAGACATTGAAATTTTAGATGAAGAAGTGTCAAAACTGGCAAACATT
TTTCCTTTGATTCGATGAAACGAAAAGCAGAGCAAATGATTCCCTTTCAT
GCAAAGCAGGTCAGTGTGGAAcgattttttaaaatctttgctcAAATTTC
AGATGGAAAAACAATTTAGCACAATCGAATCCTAATCTAATCAGTATAAT
AAGGCGAAGTGGAGTACTCTTAGGGTGTTTATTTGGAACCAAAGAGTAGA
TATCCATAATCGTTTCAATGCAGGAGGTAAGGTTTCGATTCCCCTTAATC
TTTAAATTAATTGAATACCCCTTAATCCTATTTATGCCGACATTTCTCCA
CTTTCATAATACCAGGGGGTATTTTACACCACCctgaataacttttgatc
taattgaaatttttatacTAAATTTGGAACAGATGTTGCTTATCATGGAA
AgattaaaagattttgttaaagTCAGATAGTTTTGTGtgctttgaaaaat
gtaaaagagtGCAGGGATGGTGTGGTGTAAAATAcaccctgataaaaata
gggtgtATTTTACACGTCAATACGTCATGTGTCAATTTGAGGAGAAATAG
GTATGACAACTCGGATACCGAAGAAGGGAGGAGACCTCGATATTTTTCAG
GTTCACCCTtgtactaaagtctattcacgataagtgtgcactcttttttc
ttttacctataactttcgaaggaattcttcaatctttatagatttggtat
cattggaaagatattagtgagtggaacaaattgaaataaaaatatcttta
aaaaaattataaaaatgaagatgaaaatgaagaagaaaaaaatgaagatc
ttgtagaaaagtgctataactatcattttcactgaattgAAACCTTggtt
atcgaacgtcatcactgtgaaaaaatttctcaaaaataatcattcagtca
aaagatatcaaacaaagttataagctaattgacgtctaaaaacNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatcaaagaatctctc
cagtgaaaatgatagttatagcacttttctacaagatcttcatttttttc
ttcttcattttcatcttcatttttagaattattttaaNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNtctctccaacgataccaaatgtataaagattgaagaatt
ccttcaaaagttataggtaaaagaaaaaagagtgcacacttatcgtgaat
agactttaaatcaCTTTCTTTTTACAAATTGGACGATTTTCCAGGAAGGT
CATAGTTCAACAGTCGAAGCAGCTCACAAAGGAAAGACAATGTTTAACAA
GGGACAAGCTGGATCGTGGAAGGTTCTATTTACACCAGCGATGACAAAAC
AAATGGAAGAATGGGAATCAAAATGGTTGAGAGATACTGATCTTGAACTT
ATTTATGAATAGTACTGGAGTATCGAAACATGTAAAATAAGAGttagata
aaattttgaaacgaGTAAAATGaaacatacacgcttttttttacaagaat
agtgtactttgaatgagggtcaagtattcttaagaaattggcaaaattga
gggtgaaatcttcttaacgtattcttgacttttttacaaacatgagaaaa
tcaatttgagggtttggacttttgagtgaacatttg Coding sequence (CDS) from alignment at sc0003263:4145..10180+ >TCONS_00042181 ID=TCONS_00042181|Name=TCONS_00042181|organism=Clytia hemisphaerica|type=CDS|length=3072bp|location=Sequence derived from alignment at sc0003263:4145..10180+ (Clytia hemisphaerica)
GACGAGTGTAAAGACATGGAAGAATATCATAGCGAGACATTGGAAAGCAA
ATTTTTTGCTCCCTTTGCAAACATACCTTACGTTTCTAATGTACATTACG
CTCGGCCTTCCGATGTTTTTATACCGAAaggttattttcaaaacattgaa
gagattaaaaatttcaaattttttgaagatgaTACAGTTATATGTGGATT
TCTTAAAACAGGTACGAATTGGTGCGAAAGGATTGTTTGGGCACTCCGTA
ATGATATCAAATTGAACATTCAACATGCACCCCCTGTATCAGTTTTCGAC
ATTGTTATGGGTATAGGAGATTTTGATAGTGACAACAACAAAGCTCACGA
TGAGATTTTTTCGTCCATGAAACGACCACGTGTTATCAAAATGCATCTTA
CATATGAATTATTACCAAGACAGTTTCAACAAAAGCAACCTAAGATGATT
TACATGCTTCGAAACCCAAGAGATGTTTGCCAGTCCCTTCACAGTCACTT
CTATACACTCTACGATGACTTTTCTGAATCATTACAAGATGTTGTTAATC
TCATGACCGATGATGCTGGATTCTATTCTGGTCCGTTTTTTAAACATGTT
TTGGGATACTGGAAACGACGTTCttatgaaaatatatttatcatttttta
cgaagaaatgaaaaaagatttatccggTCATATTAAGAAGATTGCTGATT
TCTTAGACATTGAAATTTTAGATGAAGAAGTGTCAAAACTGGCAAACATT
TTTCCTTTGATTCGATGAGACGAGTGTAAAGACATGGAAGAATATCATAG
CGAGACATTGGAAAGCAAATTTTTTGCTCCCTTTGCAAACATACCTTACG
TTTCTAATGTACATTACGCTCGGCCTTCCGATGTTTTTATACCGAAaggt
tattttcaaaacattgaagagattaaaaatttcaaattttttgaagatga
TACAGTTATATGTGGATTTCTTAAAACAGGTACGAATTGGTGCGAAAGGA
TTGTTTGGGCACTCCGTAATGATATCAAATTGAACATTCAACATGCACCC
CCTGTATCAGTTTTCGACATTGTTATGGGTATAGGAGATTTTGATAGTGA
CAACAACAAAGCTCACGATGAGATTTTTTCGTCCATGAAACGACCACGTG
TTATCAAAATGCATCTTACATATGAATTATTACCAAGACAGTTTCAACAA
AAGCAACCTAAGATGATTTACATGCTTCGAAACCCAAGAGATGTTTGCCA
GTCCCTTCACAGTCACTTCTATACACTCTACGATGACTTTTCTGAATCAT
TACAAGATGTTGTTAATCTCATGACCGATGATGCTGGATTCTATTCTGGT
CCGTTTTTTAAACATGTTTTGGGATACTGGAAACGACGTTCttatgaaaa
tatatttatcattttttacgaagaaatgaaaaaagatttatccggTCATA
TTAAGAAGATTGCTGATTTCTTAGACATTGAAATTTTAGATGAAGAAGTG
TCAAAACTGGCAAACATTTTTCCTTTGATTCGATGAGACGAGTGTAAAGA
CATGGAAGAATATCATAGCGAGACATTGGAAAGCAAATTTTTTGCTCCCT
TTGCAAACATACCTTACGTTTCTAATGTACATTACGCTCGGCCTTCCGAT
GTTTTTATACCGAAaggttattttcaaaacattgaagagattaaaaattt
caaattttttgaagatgaTACAGTTATATGTGGATTTCTTAAAACAGGTA
CGAATTGGTGCGAAAGGATTGTTTGGGCACTCCGTAATGATATCAAATTG
AACATTCAACATGCACCCCCTGTATCAGTTTTCGACATTGTTATGGGTAT
AGGAGATTTTGATAGTGACAACAACAAAGCTCACGATGAGATTTTTTCGT
CCATGAAACGACCACGTGTTATCAAAATGCATCTTACATATGAATTATTA
CCAAGACAGTTTCAACAAAAGCAACCTAAGATGATTTACATGCTTCGAAA
CCCAAGAGATGTTTGCCAGTCCCTTCACAGTCACTTCTATACACTCTACG
ATGACTTTTCTGAATCATTACAAGATGTTGTTAATCTCATGACCGATGAT
GCTGGATTCTATTCTGGTCCGTTTTTTAAACATGTTTTGGGATACTGGAA
ACGACGTTCttatgaaaatatatttatcattttttacgaagaaatgaaaa
aagatttatccggTCATATTAAGAAGATTGCTGATTTCTTAGACATTGAA
ATTTTAGATGAAGAAGTGTCAAAACTGGCAAACATTTTTCCTTTGATTCG
ATGAGACGAGTGTAAAGACATGGAAGAATATCATAGCGAGACATTGGAAA
GCAAATTTTTTGCTCCCTTTGCAAACATACCTTACGTTTCTAATGTACAT
TACGCTCGGCCTTCCGATGTTTTTATACCGAAaggttattttcaaaacat
tgaagagattaaaaatttcaaattttttgaagatgaTACAGTTATATGTG
GATTTCTTAAAACAGGTACGAATTGGTGCGAAAGGATTGTTTGGGCACTC
CGTAATGATATCAAATTGAACATTCAACATGCACCCCCTGTATCAGTTTT
CGACATTGTTATGGGTATAGGAGATTTTGATAGTGACAACAACAAAGCTC
ACGATGAGATTTTTTCGTCCATGAAACGACCACGTGTTATCAAAATGCAT
CTTACATATGAATTATTACCAAGACAGTTTCAACAAAAGCAACCTAAGAT
GATTTACATGCTTCGAAACCCAAGAGATGTTTGCCAGTCCCTTCACAGTC
ACTTCTATACACTCTACGATGACTTTTCTGAATCATTACAAGATGTTGTT
AATCTCATGACCGATGATGCTGGATTCTATTCTGGTCCGTTTTTTAAACA
TGTTTTGGGATACTGGAAACGACGTTCttatgaaaatatatttatcattt
tttacgaagaaatgaaaaaagatttatccggTCATATTAAGAAGATTGCT
GATTTCTTAGACATTGAAATTTTAGATGAAGAAGTGTCAAAACTGGCAAA
CATTTTTCCTTTGATTCGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042181-exon-sc0003263-1491911889:4145..4356 | TCONS_00042181-exon-sc0003263-1491911889:4145..4356 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1510915933:4145..4356 | TCONS_00042181-exon-sc0003263-1510915933:4145..4356 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1575043694:4145..4356 | TCONS_00042181-exon-sc0003263-1575043694:4145..4356 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1491911889:5150..5237 | TCONS_00042181-exon-sc0003263-1491911889:5150..5237 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1510915933:5150..5237 | TCONS_00042181-exon-sc0003263-1510915933:5150..5237 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1575043694:5150..5237 | TCONS_00042181-exon-sc0003263-1575043694:5150..5237 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1491911889:6864..7008 | TCONS_00042181-exon-sc0003263-1491911889:6864..7008 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1510915933:6864..7008 | TCONS_00042181-exon-sc0003263-1510915933:6864..7008 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1575043694:6864..7008 | TCONS_00042181-exon-sc0003263-1575043694:6864..7008 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1491911889:7839..8203 | TCONS_00042181-exon-sc0003263-1491911889:7839..8203 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1510915933:7839..8203 | TCONS_00042181-exon-sc0003263-1510915933:7839..8203 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1575043694:7839..8203 | TCONS_00042181-exon-sc0003263-1575043694:7839..8203 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1491911889:9789..10180 | TCONS_00042181-exon-sc0003263-1491911889:9789..10180 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1510915933:9789..10180 | TCONS_00042181-exon-sc0003263-1510915933:9789..10180 | Clytia hemisphaerica | exon |
| TCONS_00042181-exon-sc0003263-1575043694:9789..10180 | TCONS_00042181-exon-sc0003263-1575043694:9789..10180 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003263 | supercontig | sc0003263:4145..10180 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008146 | sulfotransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008146 |
sulfotransferase activity |
Blast
BLAST of TCONS_00042181 vs. Swiss-Prot (Human)
Match: ST1C4 (Sulfotransferase 1C4 OS=Homo sapiens GN=SULT1C4 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 1.987e-19 Identity = 62/203 (30.54%), Postives = 103/203 (50.74%), Query Frame = 2
Query: 149 EEIKNFKFFEDDTVICGFLKTGTNWCERIVWALRNDIKL-NIQHAPPVSVFDIV-MGIGDFDSDNNKAHDEIFSSMKRPRVIKMHLTYELLPRQFQQKQPKMIYMLRNPRDVCQSLHSHFYTLYDDFSESLQDVVNLMTDDAGFYS-GPFFKHVLGYWKRRSYENIFIIFYEEMKKDLSGHIKKIADFLDIEILDEEVSKLAN 748
++I NF+ DD +I + K GT W + IV ++N+ + + AP F + M I S +AH +M PR++K HL + LLP +K K+IY+ RNP+D S + HF + T AG G + +HV G+W+ + I +FYE+MKK+ I+K+A+F+ ++ D+ + K+ +
Sbjct: 36 DKIWNFQAKPDDLLISTYPKAGTTWTQEIVELIQNEGDVEKSKRAPTHQRFPFLEMKIPSLGSGLEQAH-----AMPSPRILKTHLPFHLLPPSLLEKNCKIIYVARNPKDNMVSYY-HFQRMNKALPAPGTWEEYFETFLAGKVCWGSWHEHVKGWWEAKDKHRILYLFYEDMKKNPKHEIQKLAEFIGKKLDDKVLDKIVH 232
The following BLAST results are available for this feature:
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