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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042173 ID=TCONS_00042173|Name=TCONS_00042173|organism=Clytia hemisphaerica|type=transcript|length=347bp
AGACGAGCGAGATTCCGAGCTGTGGTATGGCGAGCAGAAAGAATAGATTA
GATTGCGCATTCAATAATCGACACAATTCTTGAAGGGCTGCTGTGCTTCC
AGTGATCAAGCGCACCACAGATGAAACAGCCTGGGTGACGAGGTCGAATC
GACATTGCACCTTGGATGTTTGGTACTGGATTAATCATCCGAGCATTTGC
AGCTTGAATAATTCTTGGCACTTGCTGAAATACCTGAGCTGGTTGAAGCC
TTGGTTGTTGGAAGGAGATTCCCTGGTAGCCGAGATGTTGTGAAGCAAGC
GGAATTGCAGGAGCAGGAAAACGATTGTTGGAAAACTTGATTGCCGG Run BLAST on NCBI transcript from alignment at sc0003257:11391..12695- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042173 ID=TCONS_00042173|Name=TCONS_00042173|organism=Clytia hemisphaerica|type=transcript|length=1305bp|location=Sequence derived from alignment at sc0003257:11391..12695- (Clytia hemisphaerica)
AGACGAGCGAGATTCCGAGCTGTGGTATGGCGAGCAGAAAGAATAGATTA
GATTGCGCATTCAATAATCGACACAATTCTTGGTAAGGAAATTTTAAAAT
TTTTGTTATCAGTGTCTATCCAAATCCCTAGCCACTCAATTGCACTTGGA
ACTTAGAATCCCATTTGGATTTCCCTTCATTACAAATGAAACCTGATAGG
TACCCTGTATATTCCTTACAAATATGGAGTTTTTACGAGCTTGATCAAGG
TTGTACTCAACAGAAAGACCATCGTCAATAAAACATGCAATTTTTAAAGC
ATTTGCTCTCCAAAATTTTATCAGAACCCTGACAACTTTTGTAAAAGGGC
CGACCTCAATCCCAGTGGTAAAACTTTGAAGACGAAATCTTTTTTGGAGG
TTCCGCTGAAAGTCAAGGCAAACCCCAAATACTTTTGAAAATCTTTGTGG
ATTTCGATATGATAATAGCCACTCTTGAAGTCGAATTTAAAAAAGTATGC
CCTGTCATCACTCTANATAGCCACTCTTGAAGTCGAATTTAAAAAAGTAT
GCCCTGTCATCACTCTCCAAAAATTGTTCAAAAGCCTTCCAATCGTCAAA
TTTTATCTTTTCCTTCCAAACAAACTTATTAAGAAAACTTAGGTCTAAAA
CGAGTCGCCTTTTACCAGCAGAACTTTTTGCAACAGAGAGGGGGCTTGTC
ATGTAAGGTGGGGAATCAACTTGTGAAACAAAGCCCTGAGCAAGTAGCTC
TGCAATGGATTCTTCTACAAATTCCTTCTCCCTATGAGCCTAAATGTTGT
TCTTAAATTCTGCGGCGGGTGGTATGTATCTCAGAGGAATCCTATAACCC
AACTTAATTGTATTCAGAATGAAGTCGTTTGCCTTTAAATCGATCTCCCA
AAATTTAGCATGCCTTCTGAGACTCCCTTTAATTCGAATTGGTTTTTGAT
CCCCCCTTTCTTCGGCCTTTTCATAAGGATGAAACCGATTTTTTGCAGAA
AATTTAAATTCAAATTCTTCATACCAATTTGTTCTACTAGAAGGGCTGCT
GTGCTTCCAGTGATCAAGCGCACCACAGATGAAACAGCCTGGGTGACGAG
GTCGAATCGACATTGCACCTTGGATGTTTGGTACTGGATTAATCATCCGA
GCATTTGCAGCTTGAATAATTCTTGGCACTTGCTGAAATACCTGAGCTGG
TTGAAGCCTTGGTTGTTGGAAGGAGATTCCCTGGTAGCCGAGATGTTGTG
AAGCAAGCGGAATTGCAGGAGCAGGAAAACGATTGTTGGAAAACTTGATT
GCCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042173-exon-sc0003257-1575043694:12614..12695 | TCONS_00042173-exon-sc0003257-1575043694:12614..12695 | Clytia hemisphaerica | exon |
| TCONS_00042173-exon-sc0003257-1575043694:11391..11655 | TCONS_00042173-exon-sc0003257-1575043694:11391..11655 | Clytia hemisphaerica | exon |
| TCONS_00042173-exon-sc0003257-1510915933:12614..12695 | TCONS_00042173-exon-sc0003257-1510915933:12614..12695 | Clytia hemisphaerica | exon |
| TCONS_00042173-exon-sc0003257-1510915933:11391..11655 | TCONS_00042173-exon-sc0003257-1510915933:11391..11655 | Clytia hemisphaerica | exon |
| TCONS_00042173-exon-sc0003257-1491911889:12614..12695 | TCONS_00042173-exon-sc0003257-1491911889:12614..12695 | Clytia hemisphaerica | exon |
| TCONS_00042173-exon-sc0003257-1491911889:11391..11655 | TCONS_00042173-exon-sc0003257-1491911889:11391..11655 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003257 | supercontig | sc0003257:11391..12695 - |
Blast
The following BLAST results are available for this feature:
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