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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042164 ID=TCONS_00042164|Name=TCONS_00042164|organism=Clytia hemisphaerica|type=transcript|length=1002bp
gaagatttttgacaAAGAATGATTAGTGAGGGATTGAATGTAAATCTAAT
TAAAAAGTTGggtagattcgctggattgTAGGATTCGGATTCAAGGATTC
GGATTCGGANATGTAAATCTAATTAAAAAGTTGACGATCAACTTTCTTGT
AGTTTTTTCCAAGTATAATATGGTCATAATcgtaaaaaatatattttatc
tcaaaaaatatttacaatcaaATATTTATTGCGATGACATTTTGTTTAAA
TGGATGATTTTATATCGTATTGAGTATAAGTTCAACAATTCGAACCCAAG
CCGAACCGAACCACACCCACGCCCACGCAACCTTAGAACAGTATCAACGC
CCACGCCCACGCCTCGAGGAAACAGCACGAAATTTGGCCACGGCCAGCTA
AACTGAGATTAACAGCTTAACCCACAAGCACAATAACAGACTACCACGTG
GACGTTTTCTCAGTAGTAACCAGATGTACAGATAGATAAGTTTTTGGCTC
TTTTTAGAAGACACTGATACTCTACTCTACATACTGTACTCGGTATAAAA
TAATTCACACCCAAAATCTCTattcatttttctcatctttcaGTTTTTTC
ATTCCTCTTGTGGAATTGTTATCACTACCATGGGGAAGTAAGCATTTTCC
ACACTGTCCTTGAGTGAAAACCAACATGTGAACAGAAGGTTCTTCACCAC
GTAACTTTTTCAACAAAGGATATCCACATATCGCACAAGAAGAAATAAGA
CCTGCGATACCAACAATAAAGACAGCTTCCACGAAAACCATCTTGTTAAC
TTTAGTTTTTAGAAACGTTTTCCTATGTTTCCTTCCTCAGGTATATATCT
CAtaactttttttgaattgagTAAACTTAGTTAAATCCCATATTGTATAC
GCTTATCTCACACATTGAAGTAAAAATCCTATTAGGGTGTAAATCATTCA
TAACTTTTCTGAATGCAAAAAAGTATACCTCTCACAGATCTTGCGTCAAT
TT Run BLAST on NCBI transcript from alignment at sc0003250:2..1003 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042164 ID=TCONS_00042164|Name=TCONS_00042164|organism=Clytia hemisphaerica|type=transcript|length=1002bp|location=Sequence derived from alignment at sc0003250:2..1003 (Clytia hemisphaerica)
AAATTGACGCAAGATCTGTGAGAGGTATACTTTTTTGCATTCAGAAAAGT
TATGAATGATTTACACCCTAATAGGATTTTTACTTCAATGTGTGAGATAA
GCGTATACAATATGGGATTTAACTAAGTTTActcaattcaaaaaaagtta
TGAGATATATACCTGAGGAAGGAAACATAGGAAAACGTTTCTAAAAACTA
AAGTTAACAAGATGGTTTTCGTGGAAGCTGTCTTTATTGTTGGTATCGCA
GGTCTTATTTCTTCTTGTGCGATATGTGGATATCCTTTGTTGAAAAAGTT
ACGTGGTGAAGAACCTTCTGTTCACATGTTGGTTTTCACTCAAGGACAGT
GTGGAAAATGCTTACTTCCCCATGGTAGTGATAACAATTCCACAAGAGGA
ATGAAAAAACtgaaagatgagaaaaatgaatAGAGATTTTGGGTGTGAAT
TATTTTATACCGAGTACAGTATGTAGAGTAGAGTATCAGTGTCTTCTAAA
AAGAGCCAAAAACTTATCTATCTGTACATCTGGTTACTACTGAGAAAACG
TCCACGTGGTAGTCTGTTATTGTGCTTGTGGGTTAAGCTGTTAATCTCAG
TTTAGCTGGCCGTGGCCAAATTTCGTGCTGTTTCCTCGAGGCGTGGGCGT
GGGCGTTGATACTGTTCTAAGGTTGCGTGGGCGTGGGTGTGGTTCGGTTC
GGCTTGGGTTCGAATTGTTGAACTTATACTCAATACGATATAAAATCATC
CATTTAAACAAAATGTCATCGCAATAAATATttgattgtaaatatttttt
gagataaaatatattttttacgATTATGACCATATTATACTTGGAAAAAA
CTACAAGAAAGTTGATCGTCAACTTTTTAATTAGATTTACATNTCCGAAT
CCGAATCCTTGAATCCGAATCCTAcaatccagcgaatctaccCAACTTTT
TAATTAGATTTACATTCAATCCCTCACTAATCATTCTTtgtcaaaaatct
tc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042164-exon-sc0003250-1491911889:2..1003 | TCONS_00042164-exon-sc0003250-1491911889:2..1003 | Clytia hemisphaerica | exon |
| TCONS_00042164-exon-sc0003250-1510915933:2..1003 | TCONS_00042164-exon-sc0003250-1510915933:2..1003 | Clytia hemisphaerica | exon |
| TCONS_00042164-exon-sc0003250-1575043694:2..1003 | TCONS_00042164-exon-sc0003250-1575043694:2..1003 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003250 | supercontig | sc0003250:2..1003 . |
Blast
The following BLAST results are available for this feature:
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