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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042112 ID=TCONS_00042112|Name=TCONS_00042112|organism=Clytia hemisphaerica|type=transcript|length=925bp
CGCTGGTATACAGTAAAAATGGATTGAATTCAAACGTTTAACCTACATAA
AGTAATCGTTACTACATTCGAACATTGACAAATGAAGTTGGACAACCTTA
TTGATTGCGGCGAAATGTTCCTTTTTGGTTGGTGAATCATTTGGATTGCA
AGTATGCACGTCAGACAAATCATCAGATCAGTACCAGAGAAGGCTCGAGT
TGGGCCTTCGTTACTTTTGTGAAGCAGTGTGTTGCTTTGGAGTGGCGCTA
AATTAAGCTTGTTGCATGATGTTACAGGAACTAGAGTGTTGTTCGCTGTT
GAACACAAATGCACTTAATTTGTCTCTGGTTATGATTTACGATTTCAAAA
AGATTGTTGAACTTTATTTGCTGGTCAAATGTTTTAATGCTTATTGTTTG
TTTTGGTCAAGAGCTGGGACTCTTGACGGTGGGGAGTGTTACTGCCGCAG
TGCAGTAATtaatttgtatattttcaaaTGTGTCTCGTGagaattatcat
ttttattgtATATAGTTAATTGTCTTTTATCGCCTTTATGTTCTGTAATT
ACACGTTTTAGTTTTAGTATTTTCCTTTGGGATTTAAATTGCATTTAGAA
ATTTATAgattttttgtataaataagAGACTTTGTAAGAGCAATATTGTG
TGAGCTATGCTCAGAGAGCGTACGTGGTGAAATCACAGTTTTTCACCTAT
TGGAAAATATAATGTTTTATGTTTATTCAATTGAGTCGATTCTCGTTTCA
CCAAGTTtggattaaaggttttgttggCAGTGGCCTGCCTTTACAGCATT
GTTGGCATTGCTTTCGTTggatgcaaacttttttcatattgcaagtatgt
aatttttcaggtataacatggtcagatttattcacagtcacttgccttcg
tacgatttatgtaaatatacaaaca Run BLAST on NCBI transcript from alignment at sc0003213:6468..7392 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042112 ID=TCONS_00042112|Name=TCONS_00042112|organism=Clytia hemisphaerica|type=transcript|length=925bp|location=Sequence derived from alignment at sc0003213:6468..7392 (Clytia hemisphaerica)
tgtttgtatatttacataaatcgtacgaaggcaagtgactgtgaataaat
ctgaccatgttatacctgaaaaattacatacttgcaatatgaaaaaagtt
tgcatccAACGAAAGCAATGCCAACAATGCTGTAAAGGCAGGCCACTGcc
aacaaaacctttaatccaAACTTGGTGAAACGAGAATCGACTCAATTGAA
TAAACATAAAACATTATATTTTCCAATAGGTGAAAAACTGTGATTTCACC
ACGTACGCTCTCTGAGCATAGCTCACACAATATTGCTCTTACAAAGTCTc
ttatttatacaaaaaatcTATAAATTTCTAAATGCAATTTAAATCCCAAA
GGAAAATACTAAAACTAAAACGTGTAATTACAGAACATAAAGGCGATAAA
AGACAATTAACTATATacaataaaaatgataattctCACGAGACACAttt
gaaaatatacaaattaATTACTGCACTGCGGCAGTAACACTCCCCACCGT
CAAGAGTCCCAGCTCTTGACCAAAACAAACAATAAGCATTAAAACATTTG
ACCAGCAAATAAAGTTCAACAATCTTTTTGAAATCGTAAATCATAACCAG
AGACAAATTAAGTGCATTTGTGTTCAACAGCGAACAACACTCTAGTTCCT
GTAACATCATGCAACAAGCTTAATTTAGCGCCACTCCAAAGCAACACACT
GCTTCACAAAAGTAACGAAGGCCCAACTCGAGCCTTCTCTGGTACTGATC
TGATGATTTGTCTGACGTGCATACTTGCAATCCAAATGATTCACCAACCA
AAAAGGAACATTTCGCCGCAATCAATAAGGTTGTCCAACTTCATTTGTCA
ATGTTCGAATGTAGTAACGATTACTTTATGTAGGTTAAACGTTTGAATTC
AATCCATTTTTACTGTATACCAGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042112-exon-sc0003213-1491911889:6468..7392 | TCONS_00042112-exon-sc0003213-1491911889:6468..7392 | Clytia hemisphaerica | exon |
| TCONS_00042112-exon-sc0003213-1510915933:6468..7392 | TCONS_00042112-exon-sc0003213-1510915933:6468..7392 | Clytia hemisphaerica | exon |
| TCONS_00042112-exon-sc0003213-1575043694:6468..7392 | TCONS_00042112-exon-sc0003213-1575043694:6468..7392 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003213 | supercontig | sc0003213:6468..7392 . |
Blast
The following BLAST results are available for this feature:
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