TCONS_00042105 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042105
Unique NameTCONS_00042105
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length121

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042105 ID=TCONS_00042105|Name=TCONS_00042105|organism=Clytia hemisphaerica|type=transcript|length=121bp
TGACAAAACAAGAATATGGGTCACGTTTTAGAAACAAATGCTGATCTTTG
TCTGGTGAGATTGATAAGTAATATTCATATGTTTCATAATTTAACCCTAA
AGAATCTAAAATTGTATCAAT
Run BLAST on NCBI

transcript from alignment at sc0003209:16842..16962

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042105 ID=TCONS_00042105|Name=TCONS_00042105|organism=Clytia hemisphaerica|type=transcript|length=121bp|location=Sequence derived from alignment at sc0003209:16842..16962 (Clytia hemisphaerica)
ATTGATACAATTTTAGATTCTTTAGGGTTAAATTATGAAACATATGAATA
TTACTTATCAATCTCACCAGACAAAGATCAGCATTTGTTTCTAAAACGTG
ACCCATATTCTTGTTTTGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025986XLOC_025986Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042105-exon-sc0003209-1491911889:16842..16962TCONS_00042105-exon-sc0003209-1491911889:16842..16962Clytia hemisphaericaexon
TCONS_00042105-exon-sc0003209-1510915933:16842..16962TCONS_00042105-exon-sc0003209-1510915933:16842..16962Clytia hemisphaericaexon
TCONS_00042105-exon-sc0003209-1575043694:16842..16962TCONS_00042105-exon-sc0003209-1575043694:16842..16962Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003209supercontigsc0003209:16842..16962 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042105 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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