TCONS_00042101 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042101
Unique NameTCONS_00042101
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1353

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042101 ID=TCONS_00042101|Name=TCONS_00042101|organism=Clytia hemisphaerica|type=transcript|length=1353bp
aTCAGatcattaaaaatcaaattaaaataaatcaaaatggaATCACAAGA
GCTTATTGAAATCCAGGAAAATGAACCAGTttctttcataatttcaaatg
gGAAGACTTACGTTCGTTCTGGTGAGGGGCCGATTCTTCGGGCTTTCTCT
TTCGTAATGAGAAAAGTTggctttttaaagaaaaatgataGTTTGAAAAA
GGTTCATTGTGCTTATGTTATTAGTGGGCAGGAAGTTAACTCCAACGAGA
TCATcgaaagaactATTGTGCTGACATCCCTTGACTTCAAATCTAAAGAT
ATCTTTTGGAAATCTCTCGAAGAGGTTGAGGATATCTCAGTCCACATATA
CGACGTTGTAAAAACTAATATTATGGATAGTTTTTACAATTATTTGGAGT
CAATGATCGATCGTAGTGAATTAAGGGAATACAGGCTTGCTCCCTTTATT
GGCTTCCAGAATGGTGTATGGGTACTTTCTGATAAGattcacaTTAAAGA
TGGAATTATCCTAtccaaagttcaaaaatctCACATCCTTTCCAAGGAAT
TGCAAGGTTGTCAACTCGAAGTAAAAGAGAAACTCTTTACAGATAAAGAG
TATTTTGCTGGAAAGTTTGGAAGTATATTATCATTGACAAAACATTACCG
ATGTAATCGAGATGCTGTGATACAAGCAATCTCATTCACATTGACACGGC
TCTTGAGCGTAATGCACCACGAAACGCTTGCAGCTGAATCAAAGTATGCT
GTACTTGCAACTGGGGATAAGTCTGTTGGGAAGTCTTCCATTCAAAAATT
GGTAGCTCACGGCCAAGGAATACCTTCAACCAGCCATCCTTTTGCTGCTG
CTGGTGGTGATGGCAGTGGTGCTGGAACAACTTTGACAAAACAATTACAA
ATATTAGCTTTGTCTAATATGGTCATTATATTCAATGAGCTAGAGATTGC
TTCGCCAATGGTTGGAAAGGCATTAAACCAAGCTCACGACAACTATGGGT
GTCATTCAGTTGGTCGTGGAACACTTAAACCGAAAGCATCTCTGCTCGCC
TCGTCAAATCAACTGATACCACACATAAAGCTGGACACACGAATCCAAAT
TATTACGTGTGAAGAGGGGGAAGACTTCGACAAAGTCGTAGACAAAAGGG
CTTTGGATAATGATTTGACAAAATTGGTTGAATCAAATCCTGGATTTCTC
ATCGCCTGGTGTACCTGGCACAATGATATGGTTTGTAAAGCGATGGAAAG
ATTTGCAGACAAAGTTGCCAATGAAATTATCAGTTCACGCAACGACATTA
AATCTCGCTTGTTGGACGCCAAGCGCGACAACGTGATAATTGCTTTCCTG
GTT
Run BLAST on NCBI

protein sequence of TCONS_00042101-protein

>TCONS_00042101-protein ID=TCONS_00042101-protein|Name=TCONS_00042101-protein|organism=Clytia hemisphaerica|type=polypeptide|length=439bp
MESQELIEIQENEPVSFIISNGKTYVRSGEGPILRAFSFVMRKVGFLKKN
DSLKKVHCAYVISGQEVNSNEIIERTIVLTSLDFKSKDIFWKSLEEVEDI
SVHIYDVVKTNIMDSFYNYLESMIDRSELREYRLAPFIGFQNGVWVLSDK
IHIKDGIILSKVQKSHILSKELQGCQLEVKEKLFTDKEYFAGKFGSILSL
TKHYRCNRDAVIQAISFTLTRLLSVMHHETLAAESKYAVLATGDKSVGKS
SIQKLVAHGQGIPSTSHPFAAAGGDGSGAGTTLTKQLQILALSNMVIIFN
ELEIASPMVGKALNQAHDNYGCHSVGRGTLKPKASLLASSNQLIPHIKLD
TRIQIITCEEGEDFDKVVDKRALDNDLTKLVESNPGFLIAWCTWHNDMVC
KAMERFADKVANEIISSRNDIKSRLLDAKRDNVIIAFLV
Run BLAST on NCBI

transcript from alignment at sc0003208:8236..11972-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042101 ID=TCONS_00042101|Name=TCONS_00042101|organism=Clytia hemisphaerica|type=transcript|length=3737bp|location=Sequence derived from alignment at sc0003208:8236..11972- (Clytia hemisphaerica)
ATCAGATCATTAAAAATCAAATTAAAATAAATCAAAATGGAATCACAAGA
GCTTATTGAAATCCAGGTAATTTTAATTCATTAAATCTTTCTCTGAAAAT
TGATTGTGCAGTTAGTGTAGTTAAAGATGTTACAGTGTAGATGTTACAAT
GTAGATGTTATGTCGATTGTTTTAATAGTATATTTTCTTGTTTCAGGAAA
ATGAACCAGTTTCTTTCATAATTTCAAATGGGAAGACTTACGTTCGTTCT
GGTGAGGGGCCGATTCTTCGGGCTTTCTCTTTCGTAATGAGAAAAGTTGG
CTTTTTAAAGAAAAATGATAGTTTGAAAAAGGTTCATTGTGCTTATGTTA
TTAGTGGGCAGGAAGTTAACTCCAACGAGATCATCGAAAGGTAATTTTTT
TTTAAATCTTTAGTGAAATCTTATTACTGTCATTGAGGTGTTAATTCCTA
TCTTCCCCCTCCCCTTATAAAGAGGAGTACCAGCAGTCTATATTTTTTAA
GACAAGTAGATAAAGCATTGAAGTCTTATTGAATAAATGTAATTTATTTT
TTTCAGAACTATTGTGCTGACATCCCTTGACTTCAAATCTAAAGATATCT
TTTGGAAATCTCTCGAAGAGGTTGAGGATATCTCAGTCCACATATACGAC
GTTGTAAAAACTAATATTATGGATAGTTTTTACAATTATTTGGAGTCAAT
GATCGATCGTAGTGAATTAAGGGAATACAGGCTTGCTCCCTTTATTGGCT
TCCAGAATGGTGTATGGGTACTTTCTGATAAGGTAAGAACAATATCCCAA
GTAGGAATTTTGGTACTGAGTGTATCTCACAATTATTTTTTTGAAGTTAA
CTCCTTTACATTGTCTCTTTGATAAAAAAATTTCCATACTGAGACCTCTG
TGATGAAGTATGATTTTAAAAGTAGCAATATTTCTCTCTTCACCTCTCAT
TTCTCACCAAACTTTGCTGCACCTGGATTCGCCAAAATTAGCCAAAATTA
AATATTTTGCTACATCATCAAAAATAAAATTCTTAGTAGTTTGCTAAAAT
AGTTCATGAATATCATCAAAATTGCTGAAAAAGCGCAGAATATTCTTTCG
CCAAAATTACTTCCAAACCAAAAGATTTTACCATTCACTAAAATGAGTTA
TTGGCAAAATGAAAGATTTCATGTCTTCAAATTATTTATTTTATAGATTC
ACATTAAAGATGGAATTATCCTATCCAAAGTTCAAAAATCTCACATCCTT
TCCAAGGAATTGCAAGGTTGTCAACTCGAAGTAAAAGAGAAACTCTTTAC
AGATAAAGAGTATTTTGCTGGAAAGTTTGGAAGGTATCTTTTCTCTTTTT
ATTCAATTTACTAATACCTTTTCTGATGATTGAAAACAAAGAGATTTTTA
CAAGGAAAAAAAGGAAAATAACCATCAGGGCTTTTAGAAAATTAGTAAAA
AATGATAAAGCCTTGCCCTTGCCTGAAATATTTCAAACATTATTTGTCCC
CTGATTCCCTCAAGGTATTGTTGTCTATGAGAAAATGAACTACTTTGTCT
GAAGCTGTATCCAGTTGTTATTTTTTCCTTTGTATAGTATATTATCATTG
ACAAAACATTACCGATGTAATCGAGATGCTGTGATACAAGCAATCTCATT
CACATTGACACGGCTCTTGAGCGTAATGCACCACGAAACGCTTGCAGGTA
TAGAAATACTATCCCCTTTTCAATTGCCACTAATCTCAATCAAAACTCCA
TTAGTAGAGGTCACTATTTGTCATCAAAATTTGCCTTGTCTGGGGGTAAT
TTGGTGTGTCCAGGGGGCCAAAAGTCACCCTGTCCGGGGGTAAATCACTA
AAAATTGTTATATCCTCCACCCCCCATGTAAANAGTCACCCTGTCCGGGG
GTAAATCACTAAAAATTGTTATATCCTCCACCCCCATGTAAATTTTTTTT
CTGGAAGAGCCCATTGACTTCTTTATATCTATGATTTAGATAATTATGAC
TGAGAGTAGTACTTACACATTTTTTAGCTGAATCAAAGTATGCTGTACTT
GCAACTGGGGATAAGTCTGTTGGGAAGTCTTCCATTCAAAAATTGGTAGC
TCACGGCCAAGGAATACCTTCAACCAGCCATCCTTTTGCTGCTGCTGGTG
GTGATGGCAGTGGTGCTGGAACAACTTTGTAAGTTTGTCTCTTTAAAATC
TTTTAAGCAGGGAATAAAGTTATTTACTTTTAGAAGGTATTGTAGGTAAC
TTTTTAGTACTTTGAAATTTTTGCGCAATTACACAGACGCCCGAAAATTC
CTAACCTACATCTTGGGGACCATGAATAAAGCTTTCTGTTTTCAAATATA
AAATGCACAATCAGACTGATGATTTTTTATTTCTTTTACTTAAGGACAAA
ACAATTACAAATATTAGCTTTGTCTAATATGGTCATTATATTCAATGAGC
TAGAGATTGCTTCGCCAATGGTTGGAAAGGCATTAAACCAAGCTCACGAC
AACTATGGGTGTCATTCAGTTGGTCGTGGAACACTTAAACCGAAAGCATC
TCTGCTCGCCTCGTCAAATCAACTGATACCACACATAAAGTAATTATCTA
ATTTAATTTTAATTAAATACGTTCTCGAACAGTCTTGACTACTTTAATAC
AGTCATTTTACATTTTTTTACATTTTTCCATTCACTAGAGGGATTCAATA
TTCTCAACTTTAGTTGAGTTAGAATATTGTGTGTATGTATGTAACTGTGT
CTGTCAGTCCCCTCAAAGCTTTGGGGCAAGCCGAAGACTTTTTTTTTTCA
TTTTTAGGGTGGTCACAAGTTTTAGCCCAAAACGAGGTTAAAAACTTTGG
GCCAGGCTGGAGACATAATTATCTAATATGATTTTCATATTGCTAAAGTT
TTCTACGTTTGATCCTTGGGTGTGGATTCAAATTAGCTTGGCTTACATGG
ATTTTACAATTGGGCCTACGAATGACTTTAAAGATACTGAAATTGTGTCA
GTGCGGTTAGCAAGTTAAAGAGTAGAATAAGTCATTGGTCAATTTTCTTT
AGGCTGGACACACGAATCCAAATTATTACGTGTGAAGAGGGGGAAGACTT
CGACAAAGTCGTAGACAAAAGGGCTTTGGATAATGATTTGACAAAATTGG
TTGAATCAAATCCTGTAAGTAATCATTTTATTTGTTTTCGAAGGCTTTTA
CTTAATTCTATTAAAATCACATTGAAAACAGAGTTTATAGAAAAGAATGA
GAGTATTGGTGATTTACTCTTTTGAAAATCATAGGTGAAGAATTATACCT
TAAGGGAAGAAATTTTTGCGGGAATTTAATTTCGCGGTTGATCAAATTAT
TTTTTTTCGCGGGAATTTAATTTCGCGGCTCAGCAATTTTCGAAAAATTC
GCGGGAATTTAATTTCGCGGTTTTAGGCAAAATCCGCGAAAACCGCAAAA
TTTTGTTTCTGCAAAAATTTCTTCCCTTAAGGTAATGGTTCACAGTGCTC
AAGCGGTGTGTTTAATGACAACCTGTGACATGGCAACACCAAAAAATATT
TCATGTTTTATTCTCTTGATTTTAGGGATTTCTCATCGCCTGGTGTACCT
GGCACAATGATATGGTTTGTAAAGCGATGGAAAGATTTGCAGACAAAGTT
GCCAATGAAATTATCAGTTCACGCAACGACATTAAATCTCGCTTGTTGGA
CGCCAAGCGCGACAACGTGATAATTGCTTTCCTGGTT

Coding sequence (CDS) from alignment at sc0003208:8236..11972-

>TCONS_00042101 ID=TCONS_00042101|Name=TCONS_00042101|organism=Clytia hemisphaerica|type=CDS|length=11853bp|location=Sequence derived from alignment at sc0003208:8236..11972- (Clytia hemisphaerica)
GGATTTCTCATCGCCTGGTGTACCTGGCACAATGATATGGTTTGTAAAGC
GATGGAAAGATTTGCAGACAAAGTTGCCAATGAAATTATCAGTTCACGCA
ACGACATTAAATCTCGCTTGTTGGACGCCAAGCGCGACAACGTGATAATT
GCTTTCCTGGTTGCTGGACACACGAATCCAAATTATTACGTGTGAAGAGG
GGGAAGACTTCGACAAAGTCGTAGACAAAAGGGCTTTGGATAATGATTTG
ACAAAATTGGTTGAATCAAATCCTGACAAAACAATTACAAATATTAGCTT
TGTCTAATATGGTCATTATATTCAATGAGCTAGAGATTGCTTCGCCAATG
GTTGGAAAGGCATTAAACCAAGCTCACGACAACTATGGGTGTCATTCAGT
TGGTCGTGGAACACTTAAACCGAAAGCATCTCTGCTCGCCTCGTCAAATC
AACTGATACCACACATAAACTGAATCAAAGTATGCTGTACTTGCAACTGG
GGATAAGTCTGTTGGGAAGTCTTCCATTCAAAAATTGGTAGCTCACGGCC
AAGGAATACCTTCAACCAGCCATCCTTTTGCTGCTGCTGGTGGTGATGGC
AGTGGTGCTGGAACAACTTTTATATTATCATTGACAAAACATTACCGATG
TAATCGAGATGCTGTGATACAAGCAATCTCATTCACATTGACACGGCTCT
TGAGCGTAATGCACCACGAAACGCTTGCAGATTCACATTAAAGATGGAAT
TATCCTATCCAAAGTTCAAAAATCTCACATCCTTTCCAAGGAATTGCAAG
GTTGTCAACTCGAAGTAAAAGAGAAACTCTTTACAGATAAAGAGTATTTT
GCTGGAAAGTTTGGAAGAACTATTGTGCTGACATCCCTTGACTTCAAATC
TAAAGATATCTTTTGGAAATCTCTCGAAGAGGTTGAGGATATCTCAGTCC
ACATATACGACGTTGTAAAAACTAATATTATGGATAGTTTTTACAATTAT
TTGGAGTCAATGATCGATCGTAGTGAATTAAGGGAATACAGGCTTGCTCC
CTTTATTGGCTTCCAGAATGGTGTATGGGTACTTTCTGATAAGGAAAATG
AACCAGTTTCTTTCATAATTTCAAATGGGAAGACTTACGTTCGTTCTGGT
GAGGGGCCGATTCTTCGGGCTTTCTCTTTCGTAATGAGAAAAGTTGGCTT
TTTAAAGAAAAATGATAGTTTGAAAAAGGTTCATTGTGCTTATGTTATTA
GTGGGCAGGAAGTTAACTCCAACGAGATCATCGAAAGATGGAATCACAAG
AGCTTATTGAAATCCAGGGATTTCTCATCGCCTGGTGTACCTGGCACAAT
GATATGGTTTGTAAAGCGATGGAAAGATTTGCAGACAAAGTTGCCAATGA
AATTATCAGTTCACGCAACGACATTAAATCTCGCTTGTTGGACGCCAAGC
GCGACAACGTGATAATTGCTTTCCTGGTTGCTGGACACACGAATCCAAAT
TATTACGTGTGAAGAGGGGGAAGACTTCGACAAAGTCGTAGACAAAAGGG
CTTTGGATAATGATTTGACAAAATTGGTTGAATCAAATCCTGACAAAACA
ATTACAAATATTAGCTTTGTCTAATATGGTCATTATATTCAATGAGCTAG
AGATTGCTTCGCCAATGGTTGGAAAGGCATTAAACCAAGCTCACGACAAC
TATGGGTGTCATTCAGTTGGTCGTGGAACACTTAAACCGAAAGCATCTCT
GCTCGCCTCGTCAAATCAACTGATACCACACATAAACTGAATCAAAGTAT
GCTGTACTTGCAACTGGGGATAAGTCTGTTGGGAAGTCTTCCATTCAAAA
ATTGGTAGCTCACGGCCAAGGAATACCTTCAACCAGCCATCCTTTTGCTG
CTGCTGGTGGTGATGGCAGTGGTGCTGGAACAACTTTTATATTATCATTG
ACAAAACATTACCGATGTAATCGAGATGCTGTGATACAAGCAATCTCATT
CACATTGACACGGCTCTTGAGCGTAATGCACCACGAAACGCTTGCAGATT
CACATTAAAGATGGAATTATCCTATCCAAAGTTCAAAAATCTCACATCCT
TTCCAAGGAATTGCAAGGTTGTCAACTCGAAGTAAAAGAGAAACTCTTTA
CAGATAAAGAGTATTTTGCTGGAAAGTTTGGAAGAACTATTGTGCTGACA
TCCCTTGACTTCAAATCTAAAGATATCTTTTGGAAATCTCTCGAAGAGGT
TGAGGATATCTCAGTCCACATATACGACGTTGTAAAAACTAATATTATGG
ATAGTTTTTACAATTATTTGGAGTCAATGATCGATCGTAGTGAATTAAGG
GAATACAGGCTTGCTCCCTTTATTGGCTTCCAGAATGGTGTATGGGTACT
TTCTGATAAGGAAAATGAACCAGTTTCTTTCATAATTTCAAATGGGAAGA
CTTACGTTCGTTCTGGTGAGGGGCCGATTCTTCGGGCTTTCTCTTTCGTA
ATGAGAAAAGTTGGCTTTTTAAAGAAAAATGATAGTTTGAAAAAGGTTCA
TTGTGCTTATGTTATTAGTGGGCAGGAAGTTAACTCCAACGAGATCATCG
AAAGATGGAATCACAAGAGCTTATTGAAATCCAGGGATTTCTCATCGCCT
GGTGTACCTGGCACAATGATATGGTTTGTAAAGCGATGGAAAGATTTGCA
GACAAAGTTGCCAATGAAATTATCAGTTCACGCAACGACATTAAATCTCG
CTTGTTGGACGCCAAGCGCGACAACGTGATAATTGCTTTCCTGGTTGCTG
GACACACGAATCCAAATTATTACGTGTGAAGAGGGGGAAGACTTCGACAA
AGTCGTAGACAAAAGGGCTTTGGATAATGATTTGACAAAATTGGTTGAAT
CAAATCCTGACAAAACAATTACAAATATTAGCTTTGTCTAATATGGTCAT
TATATTCAATGAGCTAGAGATTGCTTCGCCAATGGTTGGAAAGGCATTAA
ACCAAGCTCACGACAACTATGGGTGTCATTCAGTTGGTCGTGGAACACTT
AAACCGAAAGCATCTCTGCTCGCCTCGTCAAATCAACTGATACCACACAT
AAACTGAATCAAAGTATGCTGTACTTGCAACTGGGGATAAGTCTGTTGGG
AAGTCTTCCATTCAAAAATTGGTAGCTCACGGCCAAGGAATACCTTCAAC
CAGCCATCCTTTTGCTGCTGCTGGTGGTGATGGCAGTGGTGCTGGAACAA
CTTTTATATTATCATTGACAAAACATTACCGATGTAATCGAGATGCTGTG
ATACAAGCAATCTCATTCACATTGACACGGCTCTTGAGCGTAATGCACCA
CGAAACGCTTGCAGATTCACATTAAAGATGGAATTATCCTATCCAAAGTT
CAAAAATCTCACATCCTTTCCAAGGAATTGCAAGGTTGTCAACTCGAAGT
AAAAGAGAAACTCTTTACAGATAAAGAGTATTTTGCTGGAAAGTTTGGAA
GAACTATTGTGCTGACATCCCTTGACTTCAAATCTAAAGATATCTTTTGG
AAATCTCTCGAAGAGGTTGAGGATATCTCAGTCCACATATACGACGTTGT
AAAAACTAATATTATGGATAGTTTTTACAATTATTTGGAGTCAATGATCG
ATCGTAGTGAATTAAGGGAATACAGGCTTGCTCCCTTTATTGGCTTCCAG
AATGGTGTATGGGTACTTTCTGATAAGGAAAATGAACCAGTTTCTTTCAT
AATTTCAAATGGGAAGACTTACGTTCGTTCTGGTGAGGGGCCGATTCTTC
GGGCTTTCTCTTTCGTAATGAGAAAAGTTGGCTTTTTAAAGAAAAATGAT
AGTTTGAAAAAGGTTCATTGTGCTTATGTTATTAGTGGGCAGGAAGTTAA
CTCCAACGAGATCATCGAAAGATGGAATCACAAGAGCTTATTGAAATCCA
GGGATTTCTCATCGCCTGGTGTACCTGGCACAATGATATGGTTTGTAAAG
CGATGGAAAGATTTGCAGACAAAGTTGCCAATGAAATTATCAGTTCACGC
AACGACATTAAATCTCGCTTGTTGGACGCCAAGCGCGACAACGTGATAAT
TGCTTTCCTGGTTGCTGGACACACGAATCCAAATTATTACGTGTGAAGAG
GGGGAAGACTTCGACAAAGTCGTAGACAAAAGGGCTTTGGATAATGATTT
GACAAAATTGGTTGAATCAAATCCTGACAAAACAATTACAAATATTAGCT
TTGTCTAATATGGTCATTATATTCAATGAGCTAGAGATTGCTTCGCCAAT
GGTTGGAAAGGCATTAAACCAAGCTCACGACAACTATGGGTGTCATTCAG
TTGGTCGTGGAACACTTAAACCGAAAGCATCTCTGCTCGCCTCGTCAAAT
CAACTGATACCACACATAAACTGAATCAAAGTATGCTGTACTTGCAACTG
GGGATAAGTCTGTTGGGAAGTCTTCCATTCAAAAATTGGTAGCTCACGGC
CAAGGAATACCTTCAACCAGCCATCCTTTTGCTGCTGCTGGTGGTGATGG
CAGTGGTGCTGGAACAACTTTTATATTATCATTGACAAAACATTACCGAT
GTAATCGAGATGCTGTGATACAAGCAATCTCATTCACATTGACACGGCTC
TTGAGCGTAATGCACCACGAAACGCTTGCAGATTCACATTAAAGATGGAA
TTATCCTATCCAAAGTTCAAAAATCTCACATCCTTTCCAAGGAATTGCAA
GGTTGTCAACTCGAAGTAAAAGAGAAACTCTTTACAGATAAAGAGTATTT
TGCTGGAAAGTTTGGAAGAACTATTGTGCTGACATCCCTTGACTTCAAAT
CTAAAGATATCTTTTGGAAATCTCTCGAAGAGGTTGAGGATATCTCAGTC
CACATATACGACGTTGTAAAAACTAATATTATGGATAGTTTTTACAATTA
TTTGGAGTCAATGATCGATCGTAGTGAATTAAGGGAATACAGGCTTGCTC
CCTTTATTGGCTTCCAGAATGGTGTATGGGTACTTTCTGATAAGGAAAAT
GAACCAGTTTCTTTCATAATTTCAAATGGGAAGACTTACGTTCGTTCTGG
TGAGGGGCCGATTCTTCGGGCTTTCTCTTTCGTAATGAGAAAAGTTGGCT
TTTTAAAGAAAAATGATAGTTTGAAAAAGGTTCATTGTGCTTATGTTATT
AGTGGGCAGGAAGTTAACTCCAACGAGATCATCGAAAGATGGAATCACAA
GAGCTTATTGAAATCCAGGGATTTCTCATCGCCTGGTGTACCTGGCACAA
TGATATGGTTTGTAAAGCGATGGAAAGATTTGCAGACAAAGTTGCCAATG
AAATTATCAGTTCACGCAACGACATTAAATCTCGCTTGTTGGACGCCAAG
CGCGACAACGTGATAATTGCTTTCCTGGTTGCTGGACACACGAATCCAAA
TTATTACGTGTGAAGAGGGGGAAGACTTCGACAAAGTCGTAGACAAAAGG
GCTTTGGATAATGATTTGACAAAATTGGTTGAATCAAATCCTGACAAAAC
AATTACAAATATTAGCTTTGTCTAATATGGTCATTATATTCAATGAGCTA
GAGATTGCTTCGCCAATGGTTGGAAAGGCATTAAACCAAGCTCACGACAA
CTATGGGTGTCATTCAGTTGGTCGTGGAACACTTAAACCGAAAGCATCTC
TGCTCGCCTCGTCAAATCAACTGATACCACACATAAACTGAATCAAAGTA
TGCTGTACTTGCAACTGGGGATAAGTCTGTTGGGAAGTCTTCCATTCAAA
AATTGGTAGCTCACGGCCAAGGAATACCTTCAACCAGCCATCCTTTTGCT
GCTGCTGGTGGTGATGGCAGTGGTGCTGGAACAACTTTTATATTATCATT
GACAAAACATTACCGATGTAATCGAGATGCTGTGATACAAGCAATCTCAT
TCACATTGACACGGCTCTTGAGCGTAATGCACCACGAAACGCTTGCAGAT
TCACATTAAAGATGGAATTATCCTATCCAAAGTTCAAAAATCTCACATCC
TTTCCAAGGAATTGCAAGGTTGTCAACTCGAAGTAAAAGAGAAACTCTTT
ACAGATAAAGAGTATTTTGCTGGAAAGTTTGGAAGAACTATTGTGCTGAC
ATCCCTTGACTTCAAATCTAAAGATATCTTTTGGAAATCTCTCGAAGAGG
TTGAGGATATCTCAGTCCACATATACGACGTTGTAAAAACTAATATTATG
GATAGTTTTTACAATTATTTGGAGTCAATGATCGATCGTAGTGAATTAAG
GGAATACAGGCTTGCTCCCTTTATTGGCTTCCAGAATGGTGTATGGGTAC
TTTCTGATAAGGAAAATGAACCAGTTTCTTTCATAATTTCAAATGGGAAG
ACTTACGTTCGTTCTGGTGAGGGGCCGATTCTTCGGGCTTTCTCTTTCGT
AATGAGAAAAGTTGGCTTTTTAAAGAAAAATGATAGTTTGAAAAAGGTTC
ATTGTGCTTATGTTATTAGTGGGCAGGAAGTTAACTCCAACGAGATCATC
GAAAGATGGAATCACAAGAGCTTATTGAAATCCAGGGATTTCTCATCGCC
TGGTGTACCTGGCACAATGATATGGTTTGTAAAGCGATGGAAAGATTTGC
AGACAAAGTTGCCAATGAAATTATCAGTTCACGCAACGACATTAAATCTC
GCTTGTTGGACGCCAAGCGCGACAACGTGATAATTGCTTTCCTGGTTGCT
GGACACACGAATCCAAATTATTACGTGTGAAGAGGGGGAAGACTTCGACA
AAGTCGTAGACAAAAGGGCTTTGGATAATGATTTGACAAAATTGGTTGAA
TCAAATCCTGACAAAACAATTACAAATATTAGCTTTGTCTAATATGGTCA
TTATATTCAATGAGCTAGAGATTGCTTCGCCAATGGTTGGAAAGGCATTA
AACCAAGCTCACGACAACTATGGGTGTCATTCAGTTGGTCGTGGAACACT
TAAACCGAAAGCATCTCTGCTCGCCTCGTCAAATCAACTGATACCACACA
TAAACTGAATCAAAGTATGCTGTACTTGCAACTGGGGATAAGTCTGTTGG
GAAGTCTTCCATTCAAAAATTGGTAGCTCACGGCCAAGGAATACCTTCAA
CCAGCCATCCTTTTGCTGCTGCTGGTGGTGATGGCAGTGGTGCTGGAACA
ACTTTTATATTATCATTGACAAAACATTACCGATGTAATCGAGATGCTGT
GATACAAGCAATCTCATTCACATTGACACGGCTCTTGAGCGTAATGCACC
ACGAAACGCTTGCAGATTCACATTAAAGATGGAATTATCCTATCCAAAGT
TCAAAAATCTCACATCCTTTCCAAGGAATTGCAAGGTTGTCAACTCGAAG
TAAAAGAGAAACTCTTTACAGATAAAGAGTATTTTGCTGGAAAGTTTGGA
AGAACTATTGTGCTGACATCCCTTGACTTCAAATCTAAAGATATCTTTTG
GAAATCTCTCGAAGAGGTTGAGGATATCTCAGTCCACATATACGACGTTG
TAAAAACTAATATTATGGATAGTTTTTACAATTATTTGGAGTCAATGATC
GATCGTAGTGAATTAAGGGAATACAGGCTTGCTCCCTTTATTGGCTTCCA
GAATGGTGTATGGGTACTTTCTGATAAGGAAAATGAACCAGTTTCTTTCA
TAATTTCAAATGGGAAGACTTACGTTCGTTCTGGTGAGGGGCCGATTCTT
CGGGCTTTCTCTTTCGTAATGAGAAAAGTTGGCTTTTTAAAGAAAAATGA
TAGTTTGAAAAAGGTTCATTGTGCTTATGTTATTAGTGGGCAGGAAGTTA
ACTCCAACGAGATCATCGAAAGATGGAATCACAAGAGCTTATTGAAATCC
AGGGATTTCTCATCGCCTGGTGTACCTGGCACAATGATATGGTTTGTAAA
GCGATGGAAAGATTTGCAGACAAAGTTGCCAATGAAATTATCAGTTCACG
CAACGACATTAAATCTCGCTTGTTGGACGCCAAGCGCGACAACGTGATAA
TTGCTTTCCTGGTTGCTGGACACACGAATCCAAATTATTACGTGTGAAGA
GGGGGAAGACTTCGACAAAGTCGTAGACAAAAGGGCTTTGGATAATGATT
TGACAAAATTGGTTGAATCAAATCCTGACAAAACAATTACAAATATTAGC
TTTGTCTAATATGGTCATTATATTCAATGAGCTAGAGATTGCTTCGCCAA
TGGTTGGAAAGGCATTAAACCAAGCTCACGACAACTATGGGTGTCATTCA
GTTGGTCGTGGAACACTTAAACCGAAAGCATCTCTGCTCGCCTCGTCAAA
TCAACTGATACCACACATAAACTGAATCAAAGTATGCTGTACTTGCAACT
GGGGATAAGTCTGTTGGGAAGTCTTCCATTCAAAAATTGGTAGCTCACGG
CCAAGGAATACCTTCAACCAGCCATCCTTTTGCTGCTGCTGGTGGTGATG
GCAGTGGTGCTGGAACAACTTTTATATTATCATTGACAAAACATTACCGA
TGTAATCGAGATGCTGTGATACAAGCAATCTCATTCACATTGACACGGCT
CTTGAGCGTAATGCACCACGAAACGCTTGCAGATTCACATTAAAGATGGA
ATTATCCTATCCAAAGTTCAAAAATCTCACATCCTTTCCAAGGAATTGCA
AGGTTGTCAACTCGAAGTAAAAGAGAAACTCTTTACAGATAAAGAGTATT
TTGCTGGAAAGTTTGGAAGAACTATTGTGCTGACATCCCTTGACTTCAAA
TCTAAAGATATCTTTTGGAAATCTCTCGAAGAGGTTGAGGATATCTCAGT
CCACATATACGACGTTGTAAAAACTAATATTATGGATAGTTTTTACAATT
ATTTGGAGTCAATGATCGATCGTAGTGAATTAAGGGAATACAGGCTTGCT
CCCTTTATTGGCTTCCAGAATGGTGTATGGGTACTTTCTGATAAGGAAAA
TGAACCAGTTTCTTTCATAATTTCAAATGGGAAGACTTACGTTCGTTCTG
GTGAGGGGCCGATTCTTCGGGCTTTCTCTTTCGTAATGAGAAAAGTTGGC
TTTTTAAAGAAAAATGATAGTTTGAAAAAGGTTCATTGTGCTTATGTTAT
TAGTGGGCAGGAAGTTAACTCCAACGAGATCATCGAAAGATGGAATCACA
AGAGCTTATTGAAATCCAGGGATTTCTCATCGCCTGGTGTACCTGGCACA
ATGATATGGTTTGTAAAGCGATGGAAAGATTTGCAGACAAAGTTGCCAAT
GAAATTATCAGTTCACGCAACGACATTAAATCTCGCTTGTTGGACGCCAA
GCGCGACAACGTGATAATTGCTTTCCTGGTTGCTGGACACACGAATCCAA
ATTATTACGTGTGAAGAGGGGGAAGACTTCGACAAAGTCGTAGACAAAAG
GGCTTTGGATAATGATTTGACAAAATTGGTTGAATCAAATCCTGACAAAA
CAATTACAAATATTAGCTTTGTCTAATATGGTCATTATATTCAATGAGCT
AGAGATTGCTTCGCCAATGGTTGGAAAGGCATTAAACCAAGCTCACGACA
ACTATGGGTGTCATTCAGTTGGTCGTGGAACACTTAAACCGAAAGCATCT
CTGCTCGCCTCGTCAAATCAACTGATACCACACATAAACTGAATCAAAGT
ATGCTGTACTTGCAACTGGGGATAAGTCTGTTGGGAAGTCTTCCATTCAA
AAATTGGTAGCTCACGGCCAAGGAATACCTTCAACCAGCCATCCTTTTGC
TGCTGCTGGTGGTGATGGCAGTGGTGCTGGAACAACTTTTATATTATCAT
TGACAAAACATTACCGATGTAATCGAGATGCTGTGATACAAGCAATCTCA
TTCACATTGACACGGCTCTTGAGCGTAATGCACCACGAAACGCTTGCAGA
TTCACATTAAAGATGGAATTATCCTATCCAAAGTTCAAAAATCTCACATC
CTTTCCAAGGAATTGCAAGGTTGTCAACTCGAAGTAAAAGAGAAACTCTT
TACAGATAAAGAGTATTTTGCTGGAAAGTTTGGAAGAACTATTGTGCTGA
CATCCCTTGACTTCAAATCTAAAGATATCTTTTGGAAATCTCTCGAAGAG
GTTGAGGATATCTCAGTCCACATATACGACGTTGTAAAAACTAATATTAT
GGATAGTTTTTACAATTATTTGGAGTCAATGATCGATCGTAGTGAATTAA
GGGAATACAGGCTTGCTCCCTTTATTGGCTTCCAGAATGGTGTATGGGTA
CTTTCTGATAAGGAAAATGAACCAGTTTCTTTCATAATTTCAAATGGGAA
GACTTACGTTCGTTCTGGTGAGGGGCCGATTCTTCGGGCTTTCTCTTTCG
TAATGAGAAAAGTTGGCTTTTTAAAGAAAAATGATAGTTTGAAAAAGGTT
CATTGTGCTTATGTTATTAGTGGGCAGGAAGTTAACTCCAACGAGATCAT
CGAAAGATGGAATCACAAGAGCTTATTGAAATCCAGGGATTTCTCATCGC
CTGGTGTACCTGGCACAATGATATGGTTTGTAAAGCGATGGAAAGATTTG
CAGACAAAGTTGCCAATGAAATTATCAGTTCACGCAACGACATTAAATCT
CGCTTGTTGGACGCCAAGCGCGACAACGTGATAATTGCTTTCCTGGTTGC
TGGACACACGAATCCAAATTATTACGTGTGAAGAGGGGGAAGACTTCGAC
AAAGTCGTAGACAAAAGGGCTTTGGATAATGATTTGACAAAATTGGTTGA
ATCAAATCCTGACAAAACAATTACAAATATTAGCTTTGTCTAATATGGTC
ATTATATTCAATGAGCTAGAGATTGCTTCGCCAATGGTTGGAAAGGCATT
AAACCAAGCTCACGACAACTATGGGTGTCATTCAGTTGGTCGTGGAACAC
TTAAACCGAAAGCATCTCTGCTCGCCTCGTCAAATCAACTGATACCACAC
ATAAACTGAATCAAAGTATGCTGTACTTGCAACTGGGGATAAGTCTGTTG
GGAAGTCTTCCATTCAAAAATTGGTAGCTCACGGCCAAGGAATACCTTCA
ACCAGCCATCCTTTTGCTGCTGCTGGTGGTGATGGCAGTGGTGCTGGAAC
AACTTTTATATTATCATTGACAAAACATTACCGATGTAATCGAGATGCTG
TGATACAAGCAATCTCATTCACATTGACACGGCTCTTGAGCGTAATGCAC
CACGAAACGCTTGCAGATTCACATTAAAGATGGAATTATCCTATCCAAAG
TTCAAAAATCTCACATCCTTTCCAAGGAATTGCAAGGTTGTCAACTCGAA
GTAAAAGAGAAACTCTTTACAGATAAAGAGTATTTTGCTGGAAAGTTTGG
AAGAACTATTGTGCTGACATCCCTTGACTTCAAATCTAAAGATATCTTTT
GGAAATCTCTCGAAGAGGTTGAGGATATCTCAGTCCACATATACGACGTT
GTAAAAACTAATATTATGGATAGTTTTTACAATTATTTGGAGTCAATGAT
CGATCGTAGTGAATTAAGGGAATACAGGCTTGCTCCCTTTATTGGCTTCC
AGAATGGTGTATGGGTACTTTCTGATAAGGAAAATGAACCAGTTTCTTTC
ATAATTTCAAATGGGAAGACTTACGTTCGTTCTGGTGAGGGGCCGATTCT
TCGGGCTTTCTCTTTCGTAATGAGAAAAGTTGGCTTTTTAAAGAAAAATG
ATAGTTTGAAAAAGGTTCATTGTGCTTATGTTATTAGTGGGCAGGAAGTT
AACTCCAACGAGATCATCGAAAGATGGAATCACAAGAGCTTATTGAAATC
CAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025983XLOC_025983Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042101-proteinTCONS_00042101-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042101-exon-sc0003208-1575043694:11907..11972TCONS_00042101-exon-sc0003208-1575043694:11907..11972Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1575043694:11583..11776TCONS_00042101-exon-sc0003208-1575043694:11583..11776Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1575043694:11191..11416TCONS_00042101-exon-sc0003208-1575043694:11191..11416Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1575043694:10640..10776TCONS_00042101-exon-sc0003208-1575043694:10640..10776Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1575043694:10276..10385TCONS_00042101-exon-sc0003208-1575043694:10276..10385Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1575043694:9795..9945TCONS_00042101-exon-sc0003208-1575043694:9795..9945Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1575043694:9384..9578TCONS_00042101-exon-sc0003208-1575043694:9384..9578Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1575043694:8809..8920TCONS_00042101-exon-sc0003208-1575043694:8809..8920Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1575043694:8236..8397TCONS_00042101-exon-sc0003208-1575043694:8236..8397Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1510915933:11907..11972TCONS_00042101-exon-sc0003208-1510915933:11907..11972Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1510915933:11583..11776TCONS_00042101-exon-sc0003208-1510915933:11583..11776Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1510915933:11191..11416TCONS_00042101-exon-sc0003208-1510915933:11191..11416Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1510915933:10640..10776TCONS_00042101-exon-sc0003208-1510915933:10640..10776Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1510915933:10276..10385TCONS_00042101-exon-sc0003208-1510915933:10276..10385Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1510915933:9795..9945TCONS_00042101-exon-sc0003208-1510915933:9795..9945Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1510915933:9384..9578TCONS_00042101-exon-sc0003208-1510915933:9384..9578Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1510915933:8809..8920TCONS_00042101-exon-sc0003208-1510915933:8809..8920Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1510915933:8236..8397TCONS_00042101-exon-sc0003208-1510915933:8236..8397Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1491911889:11907..11972TCONS_00042101-exon-sc0003208-1491911889:11907..11972Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1491911889:11583..11776TCONS_00042101-exon-sc0003208-1491911889:11583..11776Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1491911889:11191..11416TCONS_00042101-exon-sc0003208-1491911889:11191..11416Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1491911889:10640..10776TCONS_00042101-exon-sc0003208-1491911889:10640..10776Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1491911889:10276..10385TCONS_00042101-exon-sc0003208-1491911889:10276..10385Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1491911889:9795..9945TCONS_00042101-exon-sc0003208-1491911889:9795..9945Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1491911889:9384..9578TCONS_00042101-exon-sc0003208-1491911889:9384..9578Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1491911889:8809..8920TCONS_00042101-exon-sc0003208-1491911889:8809..8920Clytia hemisphaericaexon
TCONS_00042101-exon-sc0003208-1491911889:8236..8397TCONS_00042101-exon-sc0003208-1491911889:8236..8397Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003208supercontigsc0003208:8236..11972 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.30651	0.422063	0.260264	1.14592	0.679963	0.574562	0.319651	0.751683	1.36553	0.842786	0.600884	0.145817	0.683669	0.13348	1.31637	1.03367	0.227019	0	0.405355	0.00135112	0.55469	0.17346	0	0.231555	0	0	0	0.260724	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042101 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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